arrow
返回

Data-driven batch detection enhances single-cell omics data analysis

delete2024-10-01
delete1
PRE
AI
Z
Ziqi Zhang
X
Xiuwei Zhang *
DOI:10.1016/j.cels.2024.09.011delete
delete原文链接
delete原文求助
delete分享
delete收藏
摘要

摘要

En 中文
在单细胞组学研究中,数据通常跨多个批次收集,导致批次效应:即引入噪声并扭曲数据分布的技术混淆因素。校正这些效应具有挑战性,原因在于其来源未知、存在非线性扭曲,以及难以将数据准确分配给最适合整合方法的数据批次。

期刊

Cell Systems 封面图
Cell Systems
IF:
7.7
论文数:
1.4K
被引数:
1.0W

机构

暂无机构信息
引用论文

引用论文

Comprehensive Integration of Single-Cell Data单细胞数据的综合集成
errCell
IF0
err2019-06-01
err0
errOAAI
errTim Stuart; Andrew Butler; Paul Hoffman; Christoph Hafemeister; Efthymia Papalexi; William M. Mauck; Yuhan Hao; Marlon Stoeckius; Peter Smibert; Rahul Satija
err分享
err收藏
Automated single-cell omics end-to-end framework with data-driven batch inference
err2024-10-01
err2
PREAI
errThistlethwaite, William; Tadych, Alicja; Ruf-Zamojski, Frederique; Bernard, Daniel J.; Cappuccio, Antonio; Zaslavsky, Elena; Chen, Xi; Sealfon, Stuart C.; Troyanskaya, Olga G.
err分享
err收藏
Deep generative modeling for single-cell transcriptomics单细胞转录组学的深度生成建模
err2018-11-30
err1.1K
errOAAI
errLopez, Romain; Regier, Jeffrey; Cole, Michael B.; Jordan, Michael I.; Yosef, Nir
err分享
err收藏
scMoMaT jointly performs single cell mosaic integration and multi-modal bio-marker detectionscMoMaT联合执行单细胞镶嵌整合和多模式生物标记检测
err2023-01-24
err11
errOAAI
errZhang, Ziqi; Sun, Haoran; Mariappan, Ragunathan; Chen, Xi; Chen, Xinyu; Jain, Mika S.; Efremova, Mirjana; Teichmann, Sarah A.; Rajan, Vaibhav; Zhang, Xiuwei
err分享
err收藏
Jointly defining cell types from multiple single-cell datasets using LIGER使用LIGER从多个单细胞数据集联合定义细胞类型
err2020-10-12
err90
errOAAI
errLiu, Jialin; Gao, Chao; Sodicoff, Joshua; Kozareva, Velina; Macosko, Evan Z.; Welch, Joshua D.
err分享
err收藏
没有更多内容