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Detecting structural heterogeneity in single-molecule localization microscopy data

delete2021-06-18
delete10
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OA
AI
T
Teun A.P.M. Huijben
H
Hamidreza Heydarian
A
Alexander Auer
F
Florian Schueder
R
Ralf Jungmann
S
Sjoerd Stallinga
B
Bernd Rieger *
DOI:10.1038/s41467-021-24106-8delete
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摘要

摘要

En 中文
Particle fusion for single molecule localization microscopy improves signal-to-noise ratio and overcomes underlabeling, but ignores structural heterogeneity or conformational variability. We present a-priori knowledge-free unsupervised classification of structurally different particles employing the Bhattacharya cost function as dissimilarity metric. We achieve 96% classification accuracy on mixtures of up to four different DNA-origami structures, detect rare classes of origami occuring at 2% rate, and capture variation in ellipticity of nuclear pore complexes. Particle fusion can improve signal-to-noise ratio in single molecule localization microscopy, but is limited by structural heterogeneity. Here, the authors demonstrate an unsupervised classification method that differentiates structurally different DNA origami structures without prior knowledge.
Keyword:
NUCLEAR-PORE COMPLEX
SUPERRESOLUTION MICROSCOPY
PARTICLE RECONSTRUCTION
AI总结

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期刊

Nature Communications 封面图
Nature Communications
IF:
15.7
论文数:
9.3W
被引数:
91.2W

机构

D
Delft University of Technology
学者数:
2.6W
论文数: 2.5W
被引数: 3.8W
U
University of Munich
学者数:
5.7W
论文数: 4.2W
被引数: 68
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