arrow
返回

Investigating RNA dynamics from single molecule transcriptomes

delete2025-06-04
delete0
PRE
AI
S
Sahiti Somalraju
D
Doaa Hassan Salem
S
Sarath Chandra Janga *
DOI:10.1016/j.tig.2025.05.001delete
delete原文链接
delete原文求助
delete分享
delete收藏
摘要

摘要

En 中文
长读长测序技术,如Pacific Biosciences(PacBio)和Oxford Nanopore Technologies,通过在单分子分辨率下直接检测转录异构体、多聚(A)尾和RNA修饰动态,彻底改变了RNA研究。用于研究多种RNA模态及其相关数据流的实验方案进展,推动了新一代计算工具的发展。计算工具的最新进展使得能够在模型系统和疾病状态下对RNA代谢进行高通量研究。高通量、第三代测序技术的出现,特别是ONT,在不对RNA原始状态造成破坏的情况下,革新了RNA修饰检测。
Keyword:
long-read sequencing
RNA modification detection
transcript isoforms
poly(A) tails
third-generation sequencing

期刊

Trends in Genetics 封面图
Trends in Genetics
IF:
16.3
论文数:
3.4K
被引数:
1.5W

机构

I
indiana university indianapolis (iui)
学者数:
3
论文数: 1
被引数: 0
引用论文

引用论文

Pseudo-Seq
err2015-01-01
err0
errOAAI
errThomas M. Carlile; Maria F. Rojas-Duran; Wendy V. Gilbert
err分享
err收藏
Context-aware transcript quantification from long-read RNA-seq data with Bambu使用Bambu从长读rna-seq数据进行上下文感知的转录本定量
err2023-06-12
err34
errOAAI
errChen, Ying; Sim, Andre; Wan, Yuk Kei; Yeo, Keith; Lee, Joseph Jing Xian; Ling, Min Hao; Love, Michael I.; Goke, Jonathan
err分享
err收藏
Regulation and Function of RNA Pseudouridylation in Human Cells
err2020-11-23
err125
errOAAI
errBorchardt, Erin K.; Martinez, Nicole M.; Gilbert, Wendy V.
err分享
err收藏
Transcriptome assembly from long-read RNA-seq alignments with StringTie2用StringTie2从长读rna-seq比对进行转录组组装
err2019-12-16
err971
errOAAI
errKovaka, Sam; Zimin, Aleksey, V; Pertea, Geo M.; Razaghi, Roham; Salzberg, Steven L.; Pertea, Mihaela
err分享
err收藏
Writers, readers, and erasers RNA modifications and drug resistance in cancer作者,读者和橡皮擦RNA修饰和癌症耐药性
err2024-08-30
err0
errOAAI
errChen, Di; Gu, Xinyu; Nurzat, Yeltai; Xu, Lixia; Li, Xueyuan; Wu, Lixin; Jiao, Henan; Gao, Peng; Zhu, Xuqiang; Yan, Dongming; Li, Shaohua; Xue, Chen
err分享
err收藏
err分享
err收藏
err分享
err收藏
err分享
err收藏
err分享
err收藏
学者 查看更多内容