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jmzML, an open-source Java API for mzML, the PSI standard for MS data
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DOI：10.1002/pmic.200900719.png)
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摘要
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We here present jmzML, a Java API for the Proteomics Standards Initiative mzML data standard. Based on the Java Architecture for XML Binding and XPath-based XML indexer random-access XML parser, jmzML can handle arbitrarily large files in minimal memory, allowing easy and efficient processing of mzML files using the Java programming language. jmzML also automatically resolves internal XML references on-the-fly. The library (which includes a viewer) can be downloaded from http://jmzml.googlecode.com.
Keyword:
Bioinformatics
Java API
Proteomics Standards Initiative MS standard
XML processing
期刊
IF:
3.9
论文数:
7.6K
被引数:
1.1W
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引用论文
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