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Nanopore-Based Protein Identification

delete2022-02-04
delete88
PRE
AI
M
Mazdak Afshar Bakshloo
J
John J. Kasianowicz *
M
Manuela Pastoriza‐Gallego
J
Jérôme Mathé
R
Régis Daniel
F
Fabien Piguet
A
Abdelghani Oukhaled *
DOI:10.1021/jacs.1c11758delete
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摘要

摘要

En 中文
The implementation of a reliable, rapid, inexpensive, and simple method for whole-proteome identification would greatly benefit cell biology research and clinical medicine. Proteins are currently identified by cleaving them with proteases, detecting the polypeptide fragments with mass spectrometry, and mapping the latter to sequences in genomic/proteomic databases. Here, we demonstrate that the polypeptide fragments can instead be detected and classified at the single-molecule limit using a nanometer-scale pore formed by the protein aerolysin. Specifically, three different water-soluble proteins treated with the same protease, trypsin, produce different polypeptide fragments defined by the degree by which the latter reduce the nanopore's ionic current. The fragments identified with the aerolysin nanopore are consistent with the predicted fragments that trypsin could produce.
Keyword:
MOLECULE MASS-SPECTROMETRY
AMINO-ACIDS
SINGLE
DISCRIMINATION
RESOLUTION
TRANSPORT
AEROLYSIN
NUMBER
DNA
ELECTROPHORESIS

期刊

Journal of the American Chemical Society 封面图
Journal of the American Chemical Society
IF:
15.6
论文数:
20.0W
被引数:
60.2W

机构

C
centre national de la recherche scientifique (cnrs)
学者数:
24.5W
论文数: 18.2W
被引数: 279
C
CY Cergy Paris Universite
学者数:
1.6K
论文数: 1.4K
被引数: 7
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