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PyLAT: Python LAMMPS Analysis Tools
DOI:10.1021/acs.jcim.9b00066.png)
摘要
En 中文
Reproducibility and accuracy have become increasingly important issues for the molecular simulation community. The availability of validated open-source postprocessing tools to analyze simulation trajectories and compute properties is key to helping researchers conduct more accurate and reproducible simulations. Here we describe a suite of open-source Python-based postprocessing routines we have developed called PyLAT. PyLAT is compatible with the popular molecular dynamics package LAMMPS and enables users to compute viscosities, self-diffusivities, ionic conductivities, molecule or ion pair lifetimes, dielectric constants, and radial distribution functions using best-practice methods.
Keyword:
MOLECULAR-DYNAMICS SIMULATIONS
PACKAGE
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期刊
IF:
5.3
论文数:
9.1K
被引数:
4.0W
机构
引用论文
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BIOPHYSICAL JOURNAL
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