arrow
返回

ZIP Code to Genomic Code

delete2024-03-28
delete5
PRE
AI
N
Neha Goel *
A
Alexandra Hernández
M
Michael H. Antoni
S
Susan B. Kesmodel
P
Paulo S. Pinheiro
E
Erin N. Kobetz
N
Nipun B. Merchant
S
Steve Cole
DOI:10.1097/SLA.0000000000006283delete
delete原文链接
delete分享
delete收藏
摘要

摘要

En 中文
Objective:To determine the association between objective (geospatial) and subjective (perceived) measures of neighborhood disadvantage (ND) and aggressive breast cancer tumor biology, defined using validated social adversity-associated transcription factor (TF) activity and clinical outcomes.Background:ND is associated with shorter breast cancer recurrence-free survival (RFS), independent of individual, tumor, and treatment characteristics, suggesting potential unaccounted biological mechanisms by which ND influences RFS.Methods:We quantified TF-binding motif prevalence within promoters of differentially expressed genes for 147 tissue samples prospectively collected on the protocol. Covariate-adjusted multivariable regression analyzed objective and subjective ND scores with 5 validated TFs of social adversity and aggressive biology-pro-inflammatory activity [nuclear factor-kappa B (NF-kB), activator protein 1 (AP-1)], sympathetic nervous system (SNS) activity [cyclic 3 '-5 ' adenosine monophosphate response element-binding protein (CREB)], and protective cellular responses [interferon-regulatory factor (IRF) and signal transducer and activator of transcription (STAT)]. To clinically validate these TFs as prognostic biomarkers of aggressive biology, logistic regression and multivariable Cox proportional-hazards models analyzed their association with Oncotype DX scores and RFS, respectively.Results:Increasing objective ND was associated with aggressive tumor biology (up-regulated NF-kB, activator protein 1, down-regulated IRF, and signal transducer and activator of transcription) and SNS activation (up-regulated CREB). Increasing subjective ND (eg, threat to safety) was associated with up-regulated NF-kB and CREB and down-regulated IRF. These TF patterns were associated with high-risk Oncotype DX scores and shorter RFS.Conclusions:In the largest human social genomics study, objective and subjective ND were significantly associated with TFs of aggressive biology and SNS activation. These TFs also correlated with worse clinical outcomes, implicating SNS activation as one potential mechanism behind ND survival disparities. These findings remain to be validated in a national cohort.
Keyword:
breast cancer
health disparities
neighborhood disadvantage
social genomics

期刊

Annals of Surgery 封面图
Annals of Surgery
IF:
6.4
论文数:
1.1W
被引数:
6.1W

机构

U
university of miami
学者数:
640
论文数: 308
被引数: 6.4K
引用论文

引用论文

Human Social Genomics
err2014-08-28
err299
errOAAI
errCole, Steven W.
err分享
err收藏
Social regulation of inflammation related gene expression in the multi-ethnic study of atherosclerosis
err2020-07-01
err21
errOAAI
errBrown, Kristen M.; Diez-Roux, Ana, V; Smith, Jennifer A.; Needham, Belinda L.; Mukherjee, Bhramar; Ware, Erin B.; Liu, Yongmei; Cole, Steven W.; Seeman, Teresa E.; Kardia, Sharon L. R.
err分享
err收藏
Transcriptomic analyses of black women in neighborhoods with high levels of violence暴力程度高的社区中黑人妇女的转录组学分析
err2021-05-01
err18
errOAAI
errLee, Meggan J.; Rittschof, Clare C.; Greenlee, Andrew J.; Turi, Kedir N.; Rodriguez-Zas, Sandra L.; Robinson, Gene E.; Cole, Steven W.; Mendenhall, Ruby
err分享
err收藏
Neighborhood and Individual Socioeconomic Disadvantage and Survival Among Patients With Nonmetastatic Common Cancers非转移性常见癌症患者的邻里和个人社会经济劣势与生存率
err2021-12-17
err80
errOAAI
errCheng, En; Soulos, Pamela R.; Irwin, Melinda L.; Feliciano, Elizabeth M. Cespedes; Presley, Carolyn J.; Fuchs, Charles S.; Meyerhardt, Jeffrey A.; Gross, Cary P.
err分享
err收藏
Neighborhood disadvantage and biological aging biomarkers among breast cancer patients
err2022-06-30
err33
errOAAI
errShen, Jie; Fuemmeler, Bernard F.; Sheppard, Vanessa B.; Bear, Harry D.; Song, Renduo; Chow, Wong-Ho; Zhao, Hua
err分享
err收藏
Preoperative β-Blockade with Propranolol Reduces Biomarkers of Metastasis in Breast Cancer: A Phase II Randomized Trial
err2020-04-15
err135
errOAAI
errHiller, Jonathan G.; Cole, Steven W.; Crone, Elizabeth M.; Byrne, David J.; Shackleford, David M.; Pang, Jia-Min B.; Henderson, Michael A.; Nightingale, Sophie S.; Ho, Kwok M.; Myles, Paul S.; Fox, Stephen; Riedel, Bernhard; Sloan, Erica K.
err分享
err收藏
A functional genomic fingerprint of chronic stress in humans:: Blunted glucocorticoid and increased NF-κB signaling
err2008-08-01
err502
errOAAI
errMiller, Gregory E.; Chen, Edith; Sze, Jasmen; Marin, Teresa; Arevalo, Jesusa M. G.; Doll, Richard; Ma, Roy; Cole, Steve W.
err分享
err收藏
Highly accurate transition frequencies in the H2 Lyman and Werner absorption bands
err2004-06-01
err0
errOAAI
errJ Philip; J P Sprengers; Th. Pielage; C A de Lange; W Ubachs; E Reinhold
err分享
err收藏
学者 查看更多内容