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ArrayExpress - a public database of microarray experiments and gene expression profiles

delete2007-01-03
delete576
delete
OA
AI
H
Helen Parkinson
M
Misha Kapushesky
S
Shojatalab, M.
A
Abeygunawardena, N.
C
Coulson, R.
A
Alessandro Farnè *
H
Holloway, E.
K
Kolesnykov, N.
L
Lilja, P.
M
Margus Lukk
M
Mani, R.
T
Tim F. Rayner
A
Arya M. Sharma
W
William, E.
U
Uğis Sarkans
A
Alvis Brāzma
DOI：10.1093/nar/gkl995delete
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Abstract

Abstract

En 中文
ArrayExpress is a public database for high throughput functional genomics data. ArrayExpress consists of two parts-the ArrayExpress Repository, which is a MIAME supportive public archive of microarray data, and the ArrayExpress Data Warehouse, which is a database of gene expression profiles selected from the repository and consistently reannotated. Archived experiments can be queried by experiment attributes, such as keywords, species, array platform, authors, journals or accession numbers. Gene expression profiles can be queried by gene names and properties, such as Gene Ontology terms and gene expression profiles can be visualized. ArrayExpress is a rapidly growing database, currently it contains data from > 50 000 hybridizations and > 1 500 000 individual expression profiles. ArrayExpress supports community standards, including MIAME, MAGE-ML and more recently the proposal for a spreadsheet based data exchange format: MAGE-TAB.
Keywords:
INFORMATION
REPOSITORY
MIAME
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Journal

Nucleic Acids Research cover
Nucleic Acids Research
IF:
13.1
Papers:
3.6W
Citations:
29.0W

Organization

No organization information available