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Deep learning-driven adaptive optics for single-molecule localization microscopy

delete2023-09-28
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OA
AI
P
Peiyi Zhang
马冬晗 (Donghan Ma)
X
Xi Cheng
A
Andy P. Tsai
Y
Yu Tang
H
Hao-Cheng Gao
L
Li Fang
C
Cheng Bi
G
Gary E. Landreth *
A
Alexander A. Chubykin *
F
Fang Huang *
DOI:10.1038/s41592-023-02029-0delete
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Abstract

Abstract

En 中文
The inhomogeneous refractive indices of biological tissues blur and distort single-molecule emission patterns generating image artifacts and decreasing the achievable resolution of single-molecule localization microscopy (SMLM). Conventional sensorless adaptive optics methods rely on iterative mirror changes and image-quality metrics. However, these metrics result in inconsistent metric responses and thus fundamentally limit their efficacy for aberration correction in tissues. To bypass iterative trial-then-evaluate processes, we developed deep learning-driven adaptive optics for SMLM to allow direct inference of wavefront distortion and near real-time compensation. Our trained deep neural network monitors the individual emission patterns from single-molecule experiments, infers their shared wavefront distortion, feeds the estimates through a dynamic filter and drives a deformable mirror to compensate sample-induced aberrations. We demonstrated that our method simultaneously estimates and compensates 28 wavefront deformation shapes and improves the resolution and fidelity of three-dimensional SMLM through >130-mu m-thick brain tissue specimens.
Keywords:
3-DIMENSIONAL LOCALIZATION
TRANSGENIC MICE
AO-STORM
RESOLUTION
ABERRATIONS
LIMIT

Journal

Nature Methods cover
Nature Methods
IF:
32.1
Papers:
7.2K
Citations:
12.7W

Organization

Purdue University System cover
Purdue University System
Scholars:
3.9W
Papers: 3.6W
Citations: 66