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Nature Methods cover

Nature Methods

IF32.1
Papers7476
Citations148407
Journal Papers 7476
Publication Date
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PANGEA: an integrated cell atlas across diverse biological contexts enables systematic profiling of multicellular responses in human diseases
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IF32.1
delete2026-11-12
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deleteSeongryong Kim; Sungmin Cheong; Suho Lee; Yeju Kim; Ronald Xie; In Gyeong Koh; Jeongwoo La; Chanwoong Hwa; Hyunsu An; Jihwan Park; Joon-Yong An; Bo Wang; Jong-Eun Park
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Advancing multimodal tools to decode organoid complexity
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IF32.1
delete2026-11-11
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deleteDavid E. Reynolds; Renee-Tyler T. Morales; Phoebe Vallapureddy; Shailesh Senthil Kumar; Emily Huynh; Claire Messerschmidt; Vladlena Hornet; Jianhua Lim; Yoon Ho Roh; Matthias P. Lutolf; Jina Ko
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In situ profiling of plasma cell clonality with image-based single-cell transcriptomics
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IF32.1
delete2026-11-10
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deleteEvan Yang; Jose Aceves-Salvador; Carlos Castrillon; Uli S. Herrmann; Elliot H. Akama-Garren; Michael C. Carroll; Jeffrey R. Moffitt
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High school science ambitions
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IF32.1
delete2026-11-09
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deleteVivien Marx
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Deciphering the gene-centric spatial dynamics across tissue and time with GeneSPOT
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IF32.1
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deleteQi Zou; Zhikang Wang; Sijie Li; Senlin Lin; Chuangyi Han; Yan Cui; Shengxi Li; Lin Wang; Daoliang Zhang; Wei Zhang; Bin-Zhi Qian; Rui Gao; Zhiyuan Yuan
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Looking back on the adolescence of GFP research
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IF32.1
delete2026-11-09
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deleteAtsushi Miyawaki
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Author Correction: Microbial community resemblance methods differ in their ability to detect biologically relevant patterns
deleteNature Methods
IF32.1
delete2026-11-06
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deleteJustin Kuczynski; Zongzhi Liu; Catherine Lozupone; Daniel McDonald; Noah Fierer; Rob Knight
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Biological foundation models
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IF32.1
delete2026-11-05
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deleteZijian Ma; James Zou
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Automated identification of individual birds by song enables multi-year recapture from passive acoustic monitoring data
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IF32.1
delete2026-11-05
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deleteSam Lapp; R. Patrick Lyon; Scott J. Wilson; Tessa A. Rhinehart; Chapin Czarnecki; Lauren M. Chronister; Cameron J. Fiss; Jeffery L. Larkin; Erin Bayne; Justin Kitzes
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abcFISH enables multiplexed, single-molecule visualization of circular RNA spatial heterogeneity
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IF32.1
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deleteYu-Xin Liu; Bo-Wen Jiang; Kai-Ming Liu; Li Yang; Ling-Ling Chen
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Integration and annotation of spatial multi-omic data with DIRAC
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IF32.1
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deleteChang Xu; Shibo Liu; Yang Heng; Chen Yang; Yuan Cao; Junbin Gao; Songren Wei; Dongmei Jia; Diyan Liang; Yong Ma; Siok-Bian Ng; Hechen Li; Xiuwei Zhang; Yun Gong; Hui Shen; Hongwen Deng; Ao Chen; Xun Xu; Sha Liao; Qinghua Jiang; Boxiang Liu
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Unlocking spatial diversity of circular RNAs with abcFISH
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IF32.1
delete2026-11-05
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deleteSeow Neng Chan; Jun Wei Pek
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Nondisruptive 3D profiling of combinations of epigenetic marks in single cells
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IF32.1
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deleteYanbo Chen; Jonathan S. D. Radda; Myles H. Alderman; Shengyan Jin; Yubao Cheng; Yuan Zhang; Miao Liu; Andrew Z. Xiao; Siyuan Wang
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RobPicker: a meta-learning framework for robust identification of macromolecules in cryo-electron tomograms
deleteNature Methods
IF32.1
delete2026-11-04
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deleteYouwei Liang; Ramtin Hosseini; Hamidreza Rahmani; Digvijay Singh; Ruiyi Zhang; Li Zhang; Han Guo; Sang Choe; Joan Lee; Min Xu; Eran Segal; James Zou; James Williamson; Elizabeth Villa; Danielle A. Grotjahn; Pengtao Xie
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More is more: why cell number matters in microscopy
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IF32.1
delete2026-11-04
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deleteVeronika Pfannenstill; Jacky Ka Long Ko; Marco Fritzsche
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Limitations of de novo peptide sequencing in resolving sequence ambiguity
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IF32.1
delete2026-11-03
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deleteSam van Puyenbroeck; Denis Beslic; Tomi Suomi; Tanja Holstein; Thilo Muth; Laura L. Elo; Lennart Martens; Robbin Bouwmeester; Tim Van Den Bossche; Tine Claeys
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Head-mounted camera for reconstructing outdoor behavior in freely flying birds
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IF32.1
delete2026-11-03
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deleteKay-Michael Voit; Juergen Sawinski; Alexandr Klioutchnikov; Katrin Junker; Abhilash Cheekoti; Damian J. Wallace; Paul Stahr; Emily J. Matheson; Lisa Gill; Dominik Fischer; Jason. N. D. Kerr
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Selective profiling of translationally active tRNAs and their dynamics under stress
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IF32.1
delete2026-11-02
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deleteMie Monti; Hasan Yilmaz; Alessia Del Piano; Michele Arnoldi; Isabelle Bonomo; Laia Llovera; Jéssica Sarabando; Daniela Ribeiro; Ana Raquel Soares; Massimiliano Clamer; Eva Maria Novoa
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Spatial single-cell mapping of transcriptional differences across genetic backgrounds in mouse brains
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IF32.1
delete2026-10-30
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deleteZachary Hemminger; Gabriela Tam; Haley De Ocampo; Aihui Wang; Thomas Underwood; Fangming Xie; Qiuying Zhao; Dongyuan Song; Jingyi Jessica Li; Hongwei Dong; Roy Wollman
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Enhanced cfDNA methylation profiling by detection and correction of jagged ends
deleteNature Methods
IF32.1
delete2026-10-29
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deleteRui Wang; Emily G. Hamilton; Diego Almanza; Rene Bonilla; Takeshi Sugio; Angela Hui; Feng Tian; Nick A. Phillips; Chih Long Liu; Christopher H. Yoo; Stefan Alig; Cedric Rossi; Nicholas Juul; Emily L. Chen; Kevin J. Liu; Emily C. Shen; William Y. Shi; Mari Olsen; Xiaoman Kang; Viswam S. Nair; Heather A. Wakelee; Joseph B. Shrager; Shuyu Shi; Tushar Desai; Mohammad S. Esfahani; Maximilian Diehn; Ash A. Alizadeh
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