arrow
Return

MINT, the molecular interaction database: 2012 update

delete2011-11-16
delete831
delete
OA
AI
L
Luana Licata
L
Leonardo Briganti *
D
Daniele Peluso
L
Livia Perfetto
M
Marta Iannuccelli
E
Eugenia Galeota
F
Francesca Sacco
A
Anita Palma
A
Aurelio Pio Nardozza
E
Elena Santonico
L
Luisa Castagnoli
G
Gianni Cesareni
DOI:10.1093/nar/gkr930delete
deleteOriginal
deleteShare
deleteSave
View PDF
Abstract

Abstract

En 中文
The Molecular INTeraction Database (MINT, http://mint.bio.uniroma2.it/mint/) is a public repository for protein-protein interactions (PPI) reported in peer-reviewed journals. The database grows steadily over the years and at September 2011 contains approximately 235 000 binary interactions captured from over 4750 publications. The web interface allows the users to search, visualize and download interactions data. MINT is one of the members of the International Molecular Exchange consortium (IMEx) and adopts the Molecular Interaction Ontology of the Proteomics Standard Initiative (PSI-MI) standards for curation and data exchange. MINT data are freely accessible and downloadable at http://mint.bio.uniroma2.it/mint/download.do. We report here the growth of the database, the major changes in curation policy and a new algorithm to assign a confidence to each interaction.
AI Summary

AI Summary

Key information extracted from the uploaded paper, including a brief overview, abstract, background, key highlights, visual analysis, and future outlook.

Journal

Nucleic Acids Research cover
Nucleic Acids Research
IF:
13.1
Papers:
3.6W
Citations:
29.0W

Organization

I
irccs santa lucia
Scholars:
3.3K
Papers: 2.1K
Citations: 2
U
University of Rome Tor Vergata
Scholars:
2.5W
Papers: 1.8W
Citations: 2.0W
Cited Papers

Cited Papers

MatrixDB, the extracellular matrix interaction database
err2010-09-17
err111
errOAAI
errChautard, Emilie; Fatoux-Ardore, Marie; Ballut, Lionel; Thierry-Mieg, Nicolas; Ricard-Blum, Sylvie
errShare
errSave
Clear cell cancer of the ovary
err2013-09-01
err0
PREAI
errRichard T. Penson; Don S. Dizon; Michael J. Birrer
errShare
errSave
Environmental and spontaneous localization
err1990-07-01
err0
PREAI
errMichael R. Gallis; Gordon N. Fleming
errShare
errSave
Protein interactions: integration leads to belief
err2008-06-01
err32
PREAI
errChatr-aryamontri, Andrew; Ceol, Arnaud; Licata, Luana; Cesareni, Gianni
errShare
errSave
The minimum information required for reporting a molecular interaction experiment (MIMIx)
err2007-08-08
err208
errOAAI
errOrchard, Sandra; Salwinski, Lukasz; Kerrien, Samuel; Montecchi-Palazzi, Luisa; Oesterheld, Matthias; Stuempflen, Volker; Ceol, Arnaud; Chatr-aryamontri, Andrew; Armstrong, John; Woollard, Peter; Salama, John J.; Moore, Susan; Wojcik, Jerome; Bader, Gary D.; Vidal, Marc; Cusick, Michael E.; Gerstein, Mark; Gavin, Anne-Claude; Superti-Furga, Giulio; Greenblatt, Jack; Bader, Joel; Uetz, Peter; Tyers, Mike; Legrain, Pierre; Fields, Stan; Mulder, Nicola; Gilson, Michael; Niepmann, Michael; Burgoon, Lyle; De Las Rivas, Javier; Prieto, Carlos; Perreau, Victoria M.; Hogue, Chris; Mewes, Hans-Werner; Apweiler, Rolf; Xenarios, Ioannis; Eisenberg, David; Cesareni, Gianni; Hermjakob, Henning
errShare
errSave
PSICQUIC and PSISCORE: accessing and scoring molecular interactions
err2011-06-29
err221
errOAAI
errAranda, Bruno; Blankenburg, Hagen; Kerrien, Samuel; Brinkman, Fiona S. L.; Ceol, Arnaud; Chautard, Emilie; Dana, Jose M.; De Las Rivas, Javier; Dumousseau, Marine; Galeota, Eugenia; Gaulton, Anna; Goll, Johannes; Hancock, Robert E. W.; Isserlin, Ruth; Jimenez, Rafael C.; Kerssemakers, Jules; Khadake, Jyoti; Lynn, David J.; Michaut, Magali; O'Kelly, Gavin; Ono, Keiichiro; Orchard, Sandra; Prieto, Carlos; Razick, Sabry; Rigina, Olga; Salwinski, Lukasz; Simonovic, Milan; Velankar, Sameer; Winter, Andrew; Wu, Guanming; Bader, Gary D.; Cesareni, Gianni; Donaldson, Ian M.; Eisenberg, David; Kleywegt, Gerard J.; Overington, John; Ricard-Blum, Sylvie; Tyers, Mike; Albrecht, Mario; Hermjakob, Henning
errShare
errSave
Linking entries in protein interaction database to structured text: The FEBS Letters experiment
err2008-03-06
err64
errOAAI
errCeol, Arnaud; Chatr-Aryamontri, Andrew; Licata, Luana; Cesareni, Gianni
errShare
errSave
errShare
errSave
InnateDB: facilitating systems-level analyses of the mammalian innate immune response
err2008-09-02
err307
errOAAI
errLynn, David J.; Winsor, Geoffrey L.; Chan, Calvin; Richard, Nicolas; Laird, Matthew R.; Barsky, Aaron; Gardy, Jennifer L.; Roche, Fiona M.; Chan, Timothy H. W.; Shah, Naisha; Lo, Raymond; Naseer, Misbah; Que, Jaimmie; Yau, Melissa; Acab, Michael; Tulpan, Dan; Whiteside, Matthew D.; Chikatamarla, Avinash; Mah, Bernadette; Munzner, Tamara; Hokamp, Karsten; Hancock, Robert E. W.; Brinkman, Fiona S. L.
errShare
errSave
The FEBS Letters/BioCreative II.5 experiment: making biological information accessible
err2010-09-01
err30
PREAI
errLeitner, Florian; Chatr-aryamontri, Andrew; Mardis, Scott A.; Ceol, Arnaud; Krallinger, Martin; Licata, Luana; Hirschman, Lynette; Cesareni, Gianni; Valencia, Alfonso
errShare
errSave
researcher View more