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MVDINET: A Novel Multi-Level Enzyme Function Predictor With Multi-View Deep Interactive Learning

delete2024-01-01
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PRE
AI
W
Wenliang Tang
Z
Zhaohong Deng *
H
Hanwen Zhou
W
Wei Zhang
F
Fuping Hu
K
Kup‐Sze Choi
S
Shitong Wang
DOI:10.1109/TCBB.2023.3337158delete
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Abstract

Abstract

En 中文
As a class of extremely significant of biocatalysts, enzymes play an important role in the process of biological reproduction and metabolism. Therefore, the prediction of enzyme function is of great significance in biomedicine fields. Recently, computational methods for predicting enzyme function have been proposed, and they effectively reduce the cost of enzyme function prediction. However, there are still deficiencies for effectively mining the discriminant information for enzyme function recognition in existing methods. In this study, we present MVDINET, a novel method for multi-level enzyme function prediction. First, the initial multi-view feature data is extracted by the enzyme sequence. Then, the above initial views are fed into various deep specific network modules to learn the depth-specificity information. Further, a deep view interaction network is designed to extract the interaction information. Finally, the specificity information and interaction information are fed into a multi-view adaptively weighted classification. We compressively evaluate MVDINET on benchmark datasets and demonstrate that MVDINET is superior to existing methods.
Keywords:
Multi-level enzyme function prediction
multi-view deep interactive learning
multi-view adaptively weighted classification

Journal

I
IEEE-ACM Transactions on Computational Biology and Bioinformatics
IF:
3.4
Papers:
3.3K
Citations:
6.4K

Organization

H
hong kong polytechnic university
Scholars:
3.0W
Papers: 4.1W
Citations: 921