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Pooled library screening with multiplexed Cpf1 library

delete2019-07-17
delete24
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OA
AI
J
Jintan Liu
S
Sanjana Srinivasan
C
Chieh-Yuan Li
I
I-Lin Ho
J
Johnathon L. Rose
M
MennatAllah Shaheen
G
Gang Wang
W
Wantong Yao
A
Angela K. Deem
C
Chris Bristow
T
Traver Hart
G
Giulio Draetta *
DOI:10.1038/s41467-019-10963-xdelete
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Abstract

Abstract

En 中文
Capitalizing on the inherent multiplexing capability of AsCpf1, we developed a multiplexed, high-throughput screening strategy that minimizes library size without sacrificing gene targeting efficiency. We demonstrated that AsCpf1 can be used for functional genomics screenings and that an AsCpf1-based multiplexed library performs similarly as compared to currently available monocistronic CRISPR/Cas9 libraries, with only one vector required for each gene. We construct the smallest whole-genome CRISPR knock-out library, Mini-human, for the human genome (n = 17,032 constructs targeting 16,977 protein-coding genes), which performs favorably compared to conventional Cas9 libraries.
Keywords:
RNA
DESIGN
SPECIFICITIES
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Journal

Nature Communications cover
Nature Communications
IF:
15.7
Papers:
9.2W
Citations:
91.2W

Organization

U
utmd anderson cancer center
Scholars:
3.0W
Papers: 2.4W
Citations: 27
U
university of texas system
Scholars:
18.3W
Papers: 15.5W
Citations: 210