arrow
Return

Proteomic Dynamics of Breast Cancer Cell Lines Identifies Potential Therapeutic Protein Targets

delete2023-08-01
delete6
delete
OA
AI
R
Rui Sun
W
Weigang Ge
Y
Yi Zhu
A
Azin Sayad
A
Augustin Luna
M
Mengge Lyu
S
Shuang Liang
L
Luis Tobalina
V
Vinodh N. Rajapakse
C
Chen-Huan Yu
H
Huanhuan Zhang
J
Jie Fang
F
Fang Wu
H
Hui Xie
J
Julio Sáez-Rodríguez
H
Huazhong Ying
W
William C. Reinhold
C
Chris Sander

Yves Pommier
B
Benjamin G. Neel *
R
Ruedi Aebersold *
T
Tiannan Guo *
DOI:10.1016/j.mcpro.2023.100602delete
deleteOriginal
deleteShare
deleteSave
View PDF
Abstract

Abstract

En 中文
Treatment and relevant targets for breast cancer (BC) remain limited, especially for triple -negative BC (TNBC). We identified 6091 proteins of 76 human BC cell lines using data -independent acquisition (DIA). Integrating our proteomic findings with prior multi-omics datasets, we found that including proteomics data improved drug sensitivity predictions and provided insights into the mechanisms of action. We subsequently profiled the proteomic changes in nine cell lines (five TNBC and four nonTNBC) treated with EGFR/AKT/mTOR inhibitors. In TNBC, metabolism pathways were dysregulated after EGFR/ mTOR inhibitor treatment, while RNA modification and cell cycle pathways were affected by AKT inhibitor. This systematic multi-omics and in-depth analysis of the proteome of BC cells can help prioritize potential therapeutic targets and provide insights into adaptive resistance in TNBC.
Keywords:
DRUG-SENSITIVITY
BASAL-LIKE
LANDSCAPE
EXPRESSION
RESISTANCE
PATHWAY
AI Summary

AI Summary

Key information extracted from the uploaded paper, including a brief overview, abstract, background, key highlights, visual analysis, and future outlook.

Journal

M
Molecular and Cellular Proteomics
IF:
5.5
Papers:
4.8K
Citations:
1.7W

Organization

N
nyu langone medical center
Scholars:
1.1W
Papers: 6.4K
Citations: 11
P
princess margaret cancer centre
Scholars:
5.0K
Papers: 3.7K
Citations: 6
H
Harvard University
Scholars:
26.2W
Papers: 21.9W
Citations: 28.7W
W
westlake laboratory
Scholars:
498
Papers: 196
Citations: 1
D
Dana-Farber Cancer Institute
Scholars:
1.5W
Papers: 9.6K
Citations: 3.8W
H
harvard university medical affiliates
Scholars:
5.7W
Papers: 4.5W
Citations: 36
E
ETH Zurich
Scholars:
3.0W
Papers: 2.4W
Citations: 8.4W
S
swiss federal institutes of technology domain
Scholars:
9.0W
Papers: 8.0W
Citations: 163
U
university of toronto
Scholars:
14.5W
Papers: 11.9W
Citations: 165
researcher View more organizations