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Scalable data harmonization for single-cell image-based profiling with CytoTable
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DOI：10.1016/j.patter.2026.101514.png)
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Abstract
En 中文
• CytoTable standardizes single-cell morphology readouts into a common data structure • CytoTable processes outputs from tools like CellProfiler, DeepProfiler, and IN Carta • CytoTable outputs parquet or AnnData file formats, ready for downstream processing
Keywords:
image-based profiling
open-source software
single-cell harmonization
microscopy image analysis
reproducibility
high-content imaging
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