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Molecular Subtypes of High-Grade Serous Ovarian Cancer across Racial Groups and Gene Expression Platforms Davidson, Natalie R.; Barnard, Mollie E.; Hippen, Ariel A.; Campbell, Amy; Johnson, Courtney E.; Way, Gregory P.; Dalley, Brian K.; Berchuck, Andrew; Salas, Lucas A.; Peres, Lauren C.; Marks, Jeffrey R.; Schildkraut, Joellen M.; Greene, Casey S.; Doherty, Jennifer A. Share Save
High-dimensional phenotyping to define the genetic basis of cellular morphology Tegtmeyer, Matthew; Arora, Jatin; Asgari, Samira; Cimini, Beth A.; Nadig, Ajay; Peirent, Emily; Liyanage, Dhara; Way, Gregory P.; Weisbart, Erin; Nathan, Aparna; Amariuta, Tiffany; Eggan, Kevin; Haghighi, Marzieh; Mccarroll, Steven A.; O'Connor, Luke; Carpenter, Anne E.; Singh, Shantanu; Nehme, Ralda; Raychaudhuri, Soumya Share Save
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OpenPBTA: The Open Pediatric Brain Tumor Atlas Shapiro, Joshua A.; Gaonkar, Krutika S.; Spielman, Stephanie J.; Savonen, Candace L.; Bethell, Chante J.; Jin, Run; Rathi, Komal S.; Zhu, Yuankun; Egolf, Laura E.; Farrow, Bailey K.; Miller, Daniel P.; Yang, Yang; Koganti, Tejaswi; Noureen, Nighat; Koptyra, Mateusz P.; Duong, Nhat; Santi, Mariarita; Kim, Jung; Robins, Shannon; Storm, Phillip B.; Mack, Stephen C.; Lilly, Jena, V; Xie, Hongbo M.; Jain, Payal; Raman, Pichai; Rood, Brian R.; Lulla, Rishi R.; Nazarian, Javad; Kraya, Adam A.; Vaksman, Zalman; Heath, Allison P.; Kline, Cassie; Scolaro, Laura; Viaene, Angela N.; Huang, Xiaoyan; Way, Gregory P.; Foltz, Steven M.; Zhang, Bo; Poetsch, Anna R.; Mueller, Sabine; Ennis, Brian M.; Prados, Michael; Diskin, Sharon J.; Zheng, Siyuan; Guo, Yiran; Kannan, Shrivats; Waanders, Angela J.; Margol, Ashley S.; Kim, Meen Chul; Hanson, Derek; Van Kuren, Nicholas; Wong, Jessica; Kaufman, Rebecca S.; Coleman, Noel; Blackden, Christopher; Cole, Kristina A.; Mason, Jennifer L.; Madsen, Peter J.; Koschmann, Carl J.; Stewart, Douglas R.; Wafula, Eric; Brown, Miguel A.; Resnick, Adam C.; Greene, Casey S.; Rokita, Jo Lynne; Taroni, Jaclyn N. Share Save
Discovering cellular programs of intrinsic and extrinsic drivers of metabolic traits using LipocyteProfiler Laber, Samantha; Strobel, Sophie; Mercader, Josep M.; Dashti, Hesam; Santos, Felipe R. C. dos; Kubitz, Phil; Jackson, Maya; Ainbinder, Alina; Honecker, Julius; Agrawal, Saaket; Garborcauskas, Garrett; Stirling, David R.; Leong, Aaron; Figueroa, Katherine; Sinnott-Armstrong, Nasa; Kost-Alimova, Maria; Deodato, Giacomo; Harney, Alycen; Way, Gregory P.; Saadat, Alham; Harken, Sierra; Reibe-Pal, Saskia; Ebert, Hannah; Zhang, Yixin; Calabuig-Navarro, Virtu; Mcgonagle, Elizabeth; Stefek, Adam; Dupuis, Josee; Cimini, Beth A.; Hauner, Hans; Udler, Miriam S.; Carpenter, Anne E.; Florez, Jose C.; Lindgren, Cecilia; Jacobs, Suzanne B. R.; Claussnitzer, Melina Share Save
Morphology and gene expression profiling provide complementary information for mapping cell state Way, Gregory P.; Natoli, Ted; Adeboye, Adeniyi; Litichevskiy, Lev; Yang, Andrew; Lu, Xiaodong; Caicedo, Juan C.; Cimini, Beth A.; Karhohs, Kyle; Logan, David J.; Rohban, Mohammad H.; Kost-Alimova, Maria; Hartland, Kate; Bornholdt, Michael; Chandrasekaran, Srinivas Niranj; Haghighi, Marzieh; Weisbart, Erin; Singh, Shantanu; Subramanian, Aravind; Carpenter, Anne E. Share Save
Predicting cell health phenotypes using image-based morphology profiling Way, Gregory P.; Kost-Alimova, Maria; Shibue, Tsukasa; Harrington, William F.; Gill, Stanley; Piccioni, Federica; Becker, Tim; Shafqat-Abbasi, Hamdah; Hahn, William C.; Carpenter, Anne E.; Vazquez, Francisca; Singh, Shantanu Share Save
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Genome-wide association study implicates novel loci and reveals candidate effector genes for longitudinal pediatric bone accrual Cousminer, Diana L.; Wagley, Yadav; Pippin, James A.; Elhakeem, Ahmed; Way, Gregory P.; Pahl, Matthew C.; McCormack, Shana E.; Chesi, Alessandra; Mitchell, Jonathan A.; Kindler, Joseph M.; Baird, Denis; Hartley, April; Howe, Laura; Kalkwarf, Heidi J.; Lappe, Joan M.; Lu, Sumei; Leonard, Michelle E.; Johnson, Matthew E.; Hakonarson, Hakon; Gilsanz, Vicente; Shepherd, John A.; Oberfield, Sharon E.; Greene, Casey S.; Kelly, Andrea; Lawlor, Deborah A.; Voight, Benjamin F.; Wells, Andrew D.; Zemel, Babette S.; Hankenson, Kurt D.; Grant, Struan F. A. Share Save
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Immune landscapes associated with different glioblastoma molecular subtypes Martinez-Lage, Maria; Lynch, Timothy M.; Bi, Yingtao; Cocito, Carolina; Way, Gregory P.; Pal, Sharmistha; Haller, Josephine; Yan, Rachel E.; Ziober, Amy; Nguyen, Aivi; Kandpal, Manoj; O'Rourke, Donald M.; Greenfield, Jeffrey P.; Greene, Casey S.; Davuluri, Ramana V.; Dahmane, Nadia Share Save
Genomic Profiling of Childhood Tumor Patient-Derived Xenograft Models to Enable Rational Clinical Trial Design Rokita, Jo Lynne; Rathi, Komal S.; Cardenas, Maria F.; Upton, Kristen A.; Jayaseelan, Joy; Cross, Katherine L.; Pfeil, Jacob; Egolf, Laura E.; Way, Gregory P.; Farrel, Alvin; Kendsersky, Nathan M.; Patel, Khushbu; Gaonkar, Krutika S.; Modi, Apexa; Berko, Esther R.; Lopez, Gonzalo; Vaksman, Zalman; Mayoh, Chelsea; Nance, Jonas; McCoy, Kristyn; Haber, Michelle; Evans, Kathryn; McCalmont, Hannah; Bendak, Katerina; Boehm, Julia W.; Marshall, Glenn M.; Tyrrell, Vanessa; Kalletla, Karthik; Braun, Frank K.; Qi, Lin; Du, Yunchen; Zhang, Huiyuan; Lindsay, Holly B.; Zhao, Sibo; Shu, Jack; Baxter, Patricia; Morton, Christopher; Kurmashev, Dias; Zheng, Siyuan; Chen, Yidong; Bowen, Jay; Bryan, Anthony C.; Leraas, Kristen M.; Coppens, Sara E.; Doddapaneni, HarshaVardhan; Momin, Zeineen; Zhang, Wendong; Sacks, Gregory, I; Hart, Lori S.; Krytska, Kateryna; Mosse, Yael P.; Gatto, Gregory J.; Sanchez, Yolanda; Greene, Casey S.; Diskin, Sharon J.; Vaske, Olena Morozova; Haussler, David; Gastier-Foster, Julie M.; Kolb, E. Anders; Gorlick, Richard; Li, Xiao-Nan; Reynolds, C. Patrick; Kurmasheva, Raushan T.; Houghton, Peter J.; Smith, Malcolm A.; Lock, Richard B.; Raman, Pichai; Wheeler, David A.; Maris, John M. Share Save
Integrated phosphoproteomics and transcriptional classifiers reveal hidden RAS signaling dynamics in multiple myeloma Lin, Yu-Hsiu T.; Way, Gregory P.; Barwick, Benjamin G.; Mariano, Margarette C.; Marcoulis, Makeba; Ferguson, Ian D.; Driessen, Christoph; Boise, Lawrence H.; Greene, Casey S.; Wiita, Arun P. Share Save
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Opportunities and obstacles for deep learning in biology and medicine Ching, Travers; Himmelstein, Daniel S.; Beaulieu-Jones, Brett K.; Kalinin, Alexandr A.; Do, Brian T.; Way, Gregory P.; Ferrero, Enrico; Agapow, Paul-Michael; Zietz, Michael; Hoffman, Michael M.; Xie, Wei; Rosen, Gail L.; Lengerich, Benjamin J.; Israeli, Johnny; Lanchantin, Jack; Woloszynek, Stephen; Carpenter, Anne E.; Shrikumar, Avanti; Xu, Jinbo; Cofer, Evan M.; Lavender, Christopher A.; Turaga, Srinivas C.; Alexandari, Amr M.; Lu, Zhiyong; Harris, David J.; DeCaprio, Dave; Qi, Yanjun; Kundaje, Anshul; Peng, Yifan; Wiley, Laura K.; Segler, Marwin H. S.; Boca, Simina M.; Swamidass, S. Joshua; Huang, Austin; Gitter, Anthony; Greene, Casey S. Share Save
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