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Transcriptome Analysis of Mycobacteria-Specific CD4+ T Cells Identified by Activation-Induced Expression of CD154

delete2017-10-01
delete7
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OA
AI
S
Shajo Kunnath-Velayudhan
M
Michael F. Goldberg
N
Neeraj K. Saini
C
Christopher T. Johndrow
T
Tony W. Ng
A
Alison J. Johnson
J
Jiayong Xu
J
John Chan
W
William R. Jacobs
S
Steven A. Porcelli *
DOI:10.4049/jimmunol.1700654delete
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Abstract

Abstract

En 中文
Analysis of Ag-specific CD4(+) T cells in mycobacterial infections at the transcriptome level is informative but technically challenging. Although several methods exist for identifying Ag-specific T cells, including intracellular cytokine staining, cell surface cytokine-capture assays, and staining with peptide:MHC class II multimers, all of these have significant technical constraints that limit their usefulness. Measurement of activation-induced expression of CD154 has been reported to detect live Ag-specific CD4(+) T cells, but this approach remains underexplored and, to our knowledge, has not previously been applied in mycobacteria-infected animals. In this article, we show that CD154 expression identifies adoptively transferred or endogenous Ag-specific CD4(+) T cells induced by Mycobacterium bovis bacillus Calmette-Guerin vaccination. We confirmed that Ag-specific cytokine production was positively correlated with CD154 expression by CD4(+) T cells from bacillus Calmette-Guerin vaccinated mice and show that high quality microarrays can be performed from RNA isolated from CD154(+) cells purified by cell sorting. Analysis of microarray data demonstrated that the transcriptome of CD4(+) CD154(+) cells was distinct from that of CD154 cells and showed major enrichment of transcripts encoding multiple cytokines and pathways of cellular activation. One notable finding was the identification of a previously unrecognized subset of mycobacteria-specific CD4(+) T cells that is characterized by the production of IL-3. Our results support the use of CD154 expression as a practical and reliable method to isolate live Ag-specific CD4(+) T cells for transcriptomic analysis and potentially for a range of other studies in infected or previously immunized hosts.
Keywords:
FOLLICULAR HELPER-CELLS
MAST-CELL
TERMINAL DIFFERENTIATION
ACUTE-INFLAMMATION
DENDRITIC CELL
INFECTION
IMMUNITY
MICE
IL-3
BASOPHILS
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Journal

Journal of Immunology cover
Journal of Immunology
IF:
3.4
Papers:
3.7W
Citations:
9.9W

Organization

Y
Yeshiva University
Scholars:
1.7W
Papers: 1.3W
Citations: 2.7K