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Visualizing next-generation sequencing data with JBrowse

delete2012-03-12
delete67
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OA
AI
O
Oscar Westesson
M
Mitchell E. Skinner
I
Ian Holmes *
DOI:10.1093/bib/bbr078delete
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Abstract

Abstract

En 中文
JBrowse is a web-based genome browser, allowing many sources of data to be visualized, interpreted and navigated in a coherent visual framework. JBrowse uses efficient data structures, pre-generation of image tiles and client-side rendering to provide a fast, interactive browsing experience. Many of JBrowse's design features make it well suited for visualizing high-volume data, such as aligned next-generation sequencing reads.
Keywords:
genome browser
web
next-generation sequencing
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AI Summary

Key information extracted from the uploaded paper, including a brief overview, abstract, background, key highlights, visual analysis, and future outlook.

Journal

Briefings in Bioinformatics cover
Briefings in Bioinformatics
IF:
7.7
Papers:
5.6K
Citations:
2.7W

Organization

University of California System cover
University of California System
Scholars:
37.5W
Papers: 33.7W
Citations: 6.6K