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Briefings in Bioinformatics cover

Briefings in Bioinformatics

IF7.7
Papers5687
Citations31592
Journal Papers 5687
Publication Date
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Advances in computational biology approaches for digital modeling of tumor microenvironment
deleteBriefings in Bioinformatics
IF7.7
delete2026-10-28
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deleteWenlong Ming; Huimin Lu; Tianhao Zeng; Kun Luo; Jun Xu; Hongde Liu
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A single-cell transcriptomic method for the deconvolution of multi-donor blood mixtures
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IF7.7
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deleteJiayan Li; Liangze Li; Yiwei Guo; Jiaxin Ji; Huan Yu; Haiqiang Xue; Wenrui Tian; Zidong Liu; Gengqian Zhang; null
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TRACER: response-protected cross-domain alignment of cancer pharmacogenomic models with patient tumors
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IF7.7
delete2026-10-28
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deleteZhenxing Wang; Qihe Wang; Guangchao Wang; Guohua Wang; Yuming Zhao
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Systematic evaluation of robustness of deconvolution methods for spatial transcriptomics data in case of cell type mismatch
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IF7.7
delete2026-10-28
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deleteUtkarsh M Mahamune; Aldo Jongejan; Antoine H C van Kampen; Lisa G M van Baarsen; Perry D Moerland
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Supervised and covariate-adjusted dimension reduction for prediction and visualization using microbiome data
deleteBriefings in Bioinformatics
IF7.7
delete2026-10-27
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deleteCrystal Zang; Lu Tang; Rebecca A Deek
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TransSurv: compatibility-aware transfer learning for target-cohort survival prediction
deleteBriefings in Bioinformatics
IF7.7
delete2026-10-27
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deleteZheng Qu; Hongzhe Zhang; Katherine L Nathanson; Yi Fang; Hongzhe Li; Jing Wang
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Data processing in proteomics and metabolomics: liquid chromatography–mass spectrometry-based omics with divergent computational paradigms
deleteBriefings in Bioinformatics
IF7.7
delete2026-10-26
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deleteAmy Zheng; Bin Liao; Liang Zhang; Tao Huan; null
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scMAC: large language model-enhanced single-cell functional priors for completing functional context in bulk T cell receptor repertoires
deleteBriefings in Bioinformatics
IF7.7
delete2026-10-26
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deleteXinyang Qian; Jiayin Wang
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scDRP: disentangled representation learning for predicting single-cell responses to perturbations and estimating individual treatment effects
deleteBriefings in Bioinformatics
IF7.7
delete2026-10-26
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deleteJianle Sun; Petar Stojanov; Kun Zhang
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EpiInsula: calibrated regression of the Hi-C insulation score from cell-type-specific epigenomic signal
deleteBriefings in Bioinformatics
IF7.7
delete2026-10-26
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deleteYuyu Jin; Tong Chen; Jie Gao; Mengyao Tong; Guangcheng Xu; Xueyu Zhang; Weixu Liu; Yin Shen; null
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EquiDesign: a versatile computational framework for de novo protein sequence design
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IF7.7
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deleteQiang Gao; Zhongyu Xu; Kai Chen; Xiaochen Cen; Ke Yan; Jinxin Liu; Zhiwei Ji; null
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Integrating multi-omics data through deep learning with applications to autism risk gene prioritization
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IF7.7
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deleteShengtong Han; Di Wang; Wenhui Sheng; Nathanael Chu
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Robust and comprehensive meta-path modeling with multi-graph learning for miRNA–disease association prediction
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IF7.7
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deleteZhi Li; Liqun Yang; Wei Qin; Jiahui Liang; Qiao Zhao
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A genetic algorithm for detecting higher-order gene-by-environment interactions using case-parent triads
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IF7.7
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deleteMichael Nodzenski; Min Shi; David M Umbach; Clarice R Weinberg
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Biologically informative not available deconvolution excavates hidden features in proteomics datasets
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IF7.7
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deleteWeiheng Guo; Wenyi Jin; Jieyi Zheng; Jian Zhang; Xikang Feng; Lingxi Chen; Liang Zhang; null
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An advanced LLM-powered article extraction pipeline delivers a database of buffers for protein studies and protein expression conditions
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IF7.7
delete2026-10-21
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deleteZhuojian Chen; Eng Aloysius; J Sivaraman
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Can autonomous Agentic-AI systems accelerate drug discovery and development in the next decade?
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IF7.7
delete2026-10-21
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deleteNavaneet Chaturvedi; Shafiul Haque; Vijay Kumar
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WDGTA: a wavelet-denoised graph attention framework for spatial transcriptomics deconvolution
deleteBriefings in Bioinformatics
IF7.7
delete2026-10-19
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deleteHao Zhu; Chenggong Ma; Zhenchun Ran; Xumeng Liu; Haobo Tang; Tongquan Wu; Xinglong Wu; Yicheng Xie
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Artificial intelligence in spatial transcriptomics: a review of methods, datasets, and directions
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IF7.7
delete2026-10-18
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deleteNeelam Sharma; Rabia Şen; Cemal Erdem
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Assessing the impact of parental linear gene normalization on the performance of statistical models for circular RNA differential expression analysis
deleteBriefings in Bioinformatics
IF7.7
delete2026-10-15
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deleteErda Qorri; Valentin Varga; Katalin Priskin; Dóra Latinovics; Bertalan Takács; Emese Pekker; Gábor Jaksa; Bernadett Csányi; László Torday; Ali Bassam; Zsuzsanna Kahán; Lajos Pintér; Lajos Haracska; null
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