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Journal of Computational Biology

IF1.6
Papers55
Citations5068
Journal Papers 55
Publication Date
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TransGAT-DTI: Transformer and Graph Attention Network for Drug-Target Interaction Prediction
deleteJournal of Computational Biology
IF1.6
delete2026-08-01
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deleteZhou, Changjian; Wang, Shuoxiang; Zhong, Yujie; Xiang, Wensheng
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Model Selection and Parameter Estimation for Fractional SIR Model Based on the Combination of Reinforcement Learning and ABC-SMC
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IF1.6
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deleteChen, Peiqi; Gu, Wei
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Exploring Intratumor Heterogeneity in Cancer: A Comparative Evaluation of Clustering Methods
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IF1.6
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deleteRibeiro, Paulo Henrique; Simao, Adenilso da Silva
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ViraFit: Tunable Fitness Model for Viral Evolution Within a Contact Network
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IF1.6
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deleteDas, Badhan; Heath, Lenwood S.
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Simulating Protein Dynamics in Cell Signaling Pathways: A Mathematical Model Approach Incorporating Negative Interaction Mechanisms
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IF1.6
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deleteKim, Minsoo; Kim, Eunjung
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Evaluating Protein Language Model Embeddings for Viral Clade Assignment
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IF1.6
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deleteStakauskas, Brendonas; Marcinkevicius, Virginijus
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Random Projection Methods Outperform Principal Component Analysis for Dimensionality Reduction in Single Cell RNA-Seq
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IF1.6
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deleteAbdelnaby, Mohamed; Moussa, Marmar R.
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Special Issue: 13th International Conference on Computational Advances in Bio and Medical Sciences
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IF1.6
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deleteAlser, Mohammed; Bansal, Mukul S.; Khudyakov, Yury; Mangul, Serghei; Mandoiu, Ion I.; Moussa, Marmar R.; Patterson, Murray; Rajasekaran, Sanguthevar; Skums, Pavel; Yooseph, Shibu; Zelikovsky, Alexander
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DANCE: Deep Learning-Assisted Analysis of ProteiN Sequences Using Chaos Enhanced Kaleidoscopic Images
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IF1.6
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deleteMurad, Taslim; Chourasia, Prakash; Ali, Sarwan; Khan, Imdad Ullah; Patterson, Murray
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Asymmetric Drug-Drug Interaction Prediction Based on Generative Adversarial Networks and Knowledge Graph
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IF1.6
delete2026-05-01
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deleteYan, Chaokun; Li, Quanao; Luo, Junwei; Wang, Jianlin; Zhang, Ge; Luo, Huimin
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Special Issue: RECOMB Satellite Conference on Comparative Genomics (RECOMB-CG 2025)
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IF1.6
delete2026-04-01
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deleteSong, Giltae
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A Cross-Order Comparative Genomics Analysis of Insect Innate Immunity Suggests Niche-Specific Adaptation
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IF1.6
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deleteShelke, Triveni; Gupta, Vanika; Gupta, Ishaan
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A REsampling and Visual EvALuation Method to Detect and Map Local Model Violations During Biomolecular Sequence Analysis
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IF1.6
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deleteGao, Meijun; Liu, Kevin J.
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From Small Parsimony to Horizontal Gene Transfer: Inferring Horizontal Transfer and Gene Loss for Single-Origin Characters
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IF1.6
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deleteLopez Sanchez, Alitzel; Scholz, Guillaume E.; Stadler, Peter F.; Lafond, Manuel
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Probability-Based Sequence Comparison Finds Pre-Eutherian Nuclear Mitochondrial DNA Segments in Mammalian Genomes
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IF1.6
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deleteHuang, Muyao; Frith, Martin C.
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CherryRed: A Software Implementation of Cherry Distance with a New Optimization and Heuristic
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IF1.6
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deleteLandry, Kaari; Tremblay-Savard, Olivier
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Exact and Asymptotic Counts of Binary Phylogenetic Networks with a Few Reticulation Events
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IF1.6
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deleteYu, Hao; Fuchs, Michael; Yu, Guan-Ru; Zhang, Louxin
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Simple and Thorough Detection of Related Sequences with Position-Varying Probabilities of Substitutions, Insertions, and Deletions
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IF1.6
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deleteFrith, Martin C.; Boppert, Patrick; Styll, Patrick; Mirdita, Milot
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Reconstructing Ancestral Non-Coding RNAs of Multiple Families Using Sequence and Structural Information with Tree Decomposition
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IF1.6
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deleteHu, Songdi; Reinharz, Vladimir; Tremblay-Savard, Olivier
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Beyond Synteny: A Scalable Phylogenomics Method for Whole-Genome Duplication Detection
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IF1.6
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deleteKalhor, Reza; Lafond, Manuel; Scornavacca, Celine
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