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The ISME Journal

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Papers172
Citations
Journal Papers 161
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Increased precipitation decelerates temporal succession of grassland soil microbial communities
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deleteSihang Deng; Weiling Shi; Renmao Tian; Xue Guo; Daliang Ning; Xishu Zhou; Mengting Yuan; Jiajie Feng; Aifen Zhou; Ying Fu; Gang Xu; Dashuai Mu; Peng Shi; Xiangyu Fan; Yue Teng; Xin Zhao; Zhongfang Li; Jiantao Liu; Xiaonan Liu; Liyou Wu; Zhili He; Xueduan Liu; Yiqi Luo; James M Tiedje; Yunfeng Yang; Jizhong Zhou; null
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Bridging ecological processes to elevated antibiotic resistance risk in tomato microbiome under fungicide stress
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deleteConglai Zheng; Jiajin Song; Mei Shan; Houpu Zhang; Mengting Qiu; Luqing Zhang; Yunlong Yu; Xiuguo Wang; Hua Fang
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Ruminosignatures associated with methane emissions and feed efficiency across geographies and cattle breeds
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deleteIoanna-Theoni Vourlaki; Ori Furman; Ilma Tapio; Le Luo Guan; Sinéad M Waters; David Kenny; Paul Smith; Stuart F Kirwan; David Kelly; Ross Evans; Raquel Quintanilla; Miriam Piles; Antonio Reverter; Pâmela A Alexandre; Fuyong Li; Philip C Garnsworthy; Paolo Bani; Phillip B Pope; Diego P Morgavi; Itzhak Mizrahi; Yuliaxis Ramayo-Caldas
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Characterizing the ecological niche of insertion sequences within prokaryotic genomes
delete2026-07-11
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deleteFlora Gaudillière-Jami; Sophie Abby; Thomas Hindré; Ivan Junier
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β-caryophyllene gradients act as ecological filters shaping microbial life-history strategies via iron competition
delete2026-07-10
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deleteRuolan Li; Yuhui Li; Qifan Yang; Yinuo Ding; Gaofei Jiang; Yan Xu; null
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Accumulation of antimicrobial resistance genes in wild chimpanzees
delete2026-07-09
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deleteCoch Tanguy Floyde Tanga; Markus Ulrich; J Benjamin Stielow; Elias Eger; Katharina Schaufler; Stefan E Heiden; Michael Schwabe; Liran Samuni; Cathy Crockford; Tobias Deschner; Patrice Makouloutou-Nzassi; Rodrigue Mintsa-Nguema; Roman M Wittig; Sébastien Calvignac-Spencer; Fabian H Leendertz; Jan F Gogarten; Ariane Düx; null
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Spatiotemporal and hydrodynamic influences on microbial and exometabolite dynamics in coral reef and seagrass ecosystems
delete2026-07-06
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deleteBrianna M Garcia; Sharon L Grim; Yan Jia; Laura Weber; Cynthia C Becker; Mallory Kastner; Gretchen J Swarr; Melissa C Kido Soule; Aushaun Brown; Weifeng Zhang; Elizabeth B Kujawinski; Amy Apprill
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Photosynthesis-driven interactions in the phycosphere enhance bacterial extracellular superoxide production
delete2026-07-05
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deleteXi Wang; Baiwen Ma; Hongwei Yu; Lin Su; Jing Qi; Zhugen Yang; Chengzhi Hu; Jiuhui Qu
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Isolation of Allocrenothrix methanica reveals distinct ecophysiologies of filamentous methanotrophs and adaptations to O2 limitation
delete2026-07-03
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deleteKazuhiro Umezawa; Jackson Makoto Tsuji; Yukinori Tani; Seichi Nohara; Rudolf I Amann; Manabu Fukui; null
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Stoichiometric analysis of microbial communities links function, structure, and biomass carrying capacity
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deleteFrank J Bruggeman; Timothy Paez-Watson; Bas Teusink; Robbert Kleerebezem
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Minimising decompression and warming during deep seawater collection increases abundance and activity of autochthonous bacteria and archaea
delete2026-07-02
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deleteAlvaro M Plominsky; Logan M Peoples; Matthew Norenberg; Salvador Ramirez-Flandes; Sheila Podell; Kelli K Mullane; David Casagrande; Christopher Roman; Robert Pockalny; David C Smith; Caroline Belser; Julie Poulain; Eric E Allen; Ronnie N Glud; Osvaldo Ulloa; Nicholas Barber; Steven D’Hondt; Douglas H Bartlett
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Viral communities from long-term anaerobic alkane-oxidizing enrichments encode predicted cell surface adhesion functions
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deleteAditi K Narayanan; Alon Philosof; Ranjani Murali; Stephanie A Connon; Gunter Wegener; Victoria J Orphan
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Endozoicomonas acroporae enhances coral thermal resilience through host–microbe coordination
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deleteChih-Ying Lu; Yung-Pei Chang; Victor M Piñon-Gonzalez; Thomas D Lewin; Kai-Ning Shih; Po-Shun Chuang; Naohisa Wada; Sheng-Ping Yu; Zhao-Rong Yu; Yi-Hua Chen; Mo Chen; Ching-Hsiang Chin; Yu-Jing Chiou; Yi-Ling Chiu; Isabel Jiah-Yih Liao; Hsin-Feng Chang; Jui-Hung Yen; Mei-Yeh Jade Lu; Yi-Jyun Luo; Sen-Lin Tang
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Host life-history strategy is a critical determinant of virulent phage infection propensity
delete2026-06-29
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deleteChuncheng Wu; Jacques Mathieu; Cory Schwarz; Madelyn Whitaker; Jenny A Laverde Gomez; Pedro J J Alvarez
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Trichoderma enriches Burkholderia via cross-feeding of degradation intermediates to enhance atrazine degradation and alleviate soybean phytotoxicity
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deleteHaonan Jiang; Manman Zhang; Raja Asad Ali Khan; Jing Zhao; Jumei Hou; Tong Liu; null
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Density-mediated freshwater plastisphere microbiomes preferentially degrade conventional rather than biodegradable microplastics
delete2026-06-27
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deleteHaiyu Zhang; Peng Liu; Yiqi Chen; Jing Lv; Xinrui Zhang; Jiale Zhang; Yifan Sun; Chaoyi Wang; Shichen Wei; Xiaojuan Wang; Shixiang Gao; Xun Qian; Hanzhong Jia; James M Tiedje; null
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Cyanobacterial flocculation as a defence against bacterial predation
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deleteShylaja N Mohandass; Alice C Z Collins; Fabian D Conradi; Luke P Allsopp; Conrad W Mullineaux; null
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Acidifying bacteria inhibit pathogenic bacteria more strongly with increasing glucose
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deleteAndrea R Dos Santos; Clément Vulin; Sara Mitri
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