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Environmental Microbiome

IF5.4
Papers591
Citations1297
Journal Papers 579
Publication Date
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Tomato-mediated enrichment of stress-adapted rhizobacteria under salinity and drought: a combined microbiome and cultivation-based approach
deleteEnvironmental Microbiome
IF5.4
delete2026-10-03
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deleteAmna Chaudhry; Mónica Yorlady Alzate Zuluaga; Sonia Monterisi; Stefano Cesco; Youry Pii
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Phragmites australis invasions linked to shifts in soil microbial community composition and functional potential in a Northeastern U.S. salt marsh
deleteEnvironmental Microbiome
IF5.4
delete2026-10-03
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deleteRitwik Negi; Jalnette Sanchez; Sharon Kahara
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Associations between bacteriome and chemical pollutants in indoor dust from Czech households
deleteEnvironmental Microbiome
IF5.4
delete2026-10-01
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deleteEva Klvanova; Jan Bohm; Paula Marcinekova; Lisa Melymuk; Petr Kukucka; Petr Senk; Jakub Martinik; Petra Pribylova; Simona Rozarka Jilkova; Lenka Andryskova; Jana Klanova; Petra Borilova Linhartova
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Comparative metataxonomic analysis of total, viable, and active rumen microbial communities under methane-mitigated conditions
deleteEnvironmental Microbiome
IF5.4
delete2026-10-01
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deleteWoohyung Lee; Geonwoo Kim; Tansol Park
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Plant-associated microbial source assemblages and abiotic conditions shape tissue-specific endophytic microbiomes and growth responses of Ageratina adenophora
deleteEnvironmental Microbiome
IF5.4
delete2026-09-25
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deleteWen Shi; Lin Chen; Xian-Lin Guo; Na Zhang; Zheng Guo; Ting-Jiao Guan; Yu-Wei Hu; Yu-Xin Liu; Kai Fang
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Evolutionary diversification and metabolic adaptations of ANME-1 archaea
deleteEnvironmental Microbiome
IF5.4
delete2026-09-21
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deleteLei Su; Andreas P. Teske; Ian P. G. Marshall; Wenlong Qi; Wenqi Liu; Kun Zhou; Jiangtao Li
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Evolutionary constraints and genomic plasticity of a distinct thaumarchaeotal group 1.1c lineage from CO2-rich groundwater
deleteEnvironmental Microbiome
IF5.4
delete2026-09-16
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deleteMinji Kim; So-Jeong Kim; Kyung-Seok Ko; Dong-Chan Koh; Dong-Hun Kim; GiTak Chae; Meng Li; Soo-Je Park
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Machine learning-based rescoring with MS²Rescore boosts peptide identification and taxonomic specificity in metaproteomics
deleteEnvironmental Microbiome
IF5.4
delete2026-09-16
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deleteXuxa Malliet; Arthur Declercq; Ralf Gabriels; Tanja Holstein; Bart Mesuere; Thilo Muth; Pieter Verschaffelt; Christine Carapito; Lennart Martens; Tim Van Den Bossche
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Single-cell genomics reveals opportunistic Enterobacterales carrying putative cationic antimicrobial peptide resistance genes in red crown rot-affected soybean rhizoplanes
deleteEnvironmental Microbiome
IF5.4
delete2026-09-14
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deleteTakeru Ochi; Yohei Nishikawa; Masako Kifushi; Takashi Sato; Haruko Takeyama
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Vegetation-driven shifts in soil microbial communities and predicted carbon-cycling potential across soil depths in High-Arctic islands
deleteEnvironmental Microbiome
IF5.4
delete2026-09-10
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deleteJessica Cuartero; Joel Rüthi; Melissa Dawes; Ivan Alekseev; Vitalii Zemlianskii; Vasiliy Povazhnyi; Beat Stierli; Ksenia Ermokhina; Gabriela Schaepman-Strub; Beat Frey
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Linking microbial community composition of three rootstock genotypes to apple replant disease susceptibility
deleteEnvironmental Microbiome
IF5.4
delete2026-09-08
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deleteNils Orth; Nils Siefen; Jannika Staudt; Fatma M. Mahmoud; Sarah Benning; Silvia Gschwendtner; Tom P. Pielhop; Kristin Hauschild; Michael Schloter; Michaela Schmitz; Traud Winkelmann
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Dual legacy of plant water-deficit-tolerance and watering history shapes rhizosphere microbial transplant outcomes in tomato post-drought recovery
deleteEnvironmental Microbiome
IF5.4
delete2026-09-08
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deleteRodrigo Pulgar; Alexis Gaete; Madelaine Mejías; Romina Madrid; Ignacio Chávez; Lucas Pino; Andrea Talamilla-Espinoza; Jeimy Moscote; Claudio Pastenes; Dinka Mandakovic
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From functional annotation to functional meaning in microbiome research
deleteEnvironmental Microbiome
IF5.4
delete2026-09-02
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deleteRajesh Kumar Bajiya; Rania Agabi; Jimena Olabarría García; Vicenzo Paolo Torreno; Jean Armengaud; Lucia Grenga
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Accurate MAG reconstruction from a complex soil microbiome through combined short- and HiFi long-reads metagenomics
deleteEnvironmental Microbiome
IF5.4
delete2026-09-02
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deleteCarole Belliardo; Nicolas Maurice; Arthur Pere; Samuel Mondy; Alain Franc; Marc Bailly-Bechet; Claire Lemaître; Riccardo Vicedomini; Jean-Marc Frigerio; Franck Salin; Élodie Belmonte; Marie Gislard; David James Sherman; Pierre Abad; Clémence Frioux; Étienne G. J. Danchin
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Metagenomic insights into the metabolic versatility in iron-rich mats of the lucky strike hydrothermal field
deleteEnvironmental Microbiome
IF5.4
delete2026-08-26
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deleteElsa Mendes; Aina Astorch-Cardona; Carine Audiffrin; Olivier Vidalin; Céline Rommevaux; Alain Dolla
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Structure and function of the peatland prokaryotic microbiome
deleteEnvironmental Microbiome
IF5.4
delete2026-08-25
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deleteSimon Man Kit Cheung; Richard D. Pancost; Mike Vreeken; Angela V. Gallego-Sala; Casey Bryce
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Dual classification reveals diversity patterns and ecological differentiation of foliar endophytic fungi in alpine Rhododendron decorum
deleteEnvironmental Microbiome
IF5.4
delete2026-08-25
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deleteZi-Yang Huang; Hong-Wei Shen; Wen-Can Wang; Yun-Xia Li; Xi-Jun Su; Kai Fang; Zong-Long Luo
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Metagenomic insights into mechanisms of coral larval settlement induction and inhibition by marine biofilms
deleteEnvironmental Microbiome
IF5.4
delete2026-08-23
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deletePaul A. O’Brien; Sara C. Bell; Andrew P. Negri; Shannon R. Kjeldsen; Julian Zaugg; Nicole S. Webster; Muhammad Abdul Wahab; Inka Vanwonterghem; Laura Rix
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A simple but hardy bacterial community detoxifies chlorite and breaks down benzene in the cooling water of an exascale supercomputer
deleteEnvironmental Microbiome
IF5.4
delete2026-08-21
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deleteJustin Podowski; Ali Fox; Sarah Owens; Mitchell McClellan; Susan Coghlan; James J. Davis; Rick L. Stevens
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Eukaryote diversity and interactions with bacterial communities within laboratory granular activated carbon biofilter treating surface water
deleteEnvironmental Microbiome
IF5.4
delete2026-08-20
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deleteUzma; Dominic Quinn; Marta Vignola; Jeannie Leneslink; Anastasiia Kostrytsia; Caroline Gauchotte-Lindsay; William T. Sloan; Stephanie Connelly; Graeme Moore; Umer Zeeshan Ijaz; Cindy J. Smith
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