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Hudsonalpha Institute for Biotechnology

Scholars723
Papers433
Citations2.3K
Related Papers (432)
Publication Date
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New genomic resources and local adaptation GWAS in wild Malus angustifolia reveal genetic regions for enhancing abiotic resiliency in apple
errHorticulture Research
IF8.5
err2026-07-31
err0
errOAAI
errBen N Mansfeld; Zoë Migicovsky; Jordan Brock; Blake Hewens-Higgins; Erik Burchard; Alan Yocca; Shujun Ou; Lauren Whitt; Anuradha Dhingra; Alex Harkess; Ben Gutierrez; Steve Nocker; Lisa Tang; Christopher Gottschalk; null
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errSave
Assembly of Silphium interspecific hybrid genomes opens the genus to phylogenomics, ecogenomics, and molecular breeding
errNature Communications
IF15.7
err2026-07-09
err0
errOAAI
errRenan S. Souza; Josh P. Clevenger; Jerry Jenkins; Walid Korani; Jeremy Schmutz; Jane Grimwood; Christopher Plott; Yaniv Brandvain; Kathryn Turner; Allison J. Miller; Brent S. Hulke; Louis F. Nastasi; Ebony G. Murrell; Lori H. Handley; Jenell Webber; Lori Beth Boston; Stella Woeltjen; Matthew J. Rubin; Betsy Trana; Erin Howard; Ashlyn Bazzel; Alex Harkess; David L. Van Tassel
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errSave
A public mid-density genotyping platform for pecan [Carya illinoinensis (Wangenh.) K. Koch]
errThe Plant Genome
IF0
err2026-06-13
err0
errOAAI
errShufen Chen; Meng Lin; Dongyan Zhao; Warren Chatwin; Xinwang Wang; Angelyn Hilton; John T. Lovell; Jennifer Randall; Kasia Heller-Uszynska; Cristiane H. Taniguti; Craig T. Beil; Moira J. Sheehan
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errSave
Whole genome-wide association study reveals genetic insights into leaf spot disease resistances and seed germination/dormancy in peanut
errFrontiers in Plant Science
IF4.8
err2026-06-10
err0
errOAAI
errJZ Jie Zhang; KC Kelly Chamberlin; ML Ming Li Wang; JC Josh Clevenger; PD Phat Dang; YC Ye Chu; CH Corley Holbrook; PO Peggy Ozias-Akins; CY Charles Y. Chen
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KhufuEnv, an auxiliary toolkit for building computational pipelines for plant and animal breeding
errBMC Bioinformatics
IF3.3
err2026-06-03
err0
errOAAI
errHallie C. Wright; Catherine E. M. Davis; Josh Clevenger; Walid Korani
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errSave
An X-linked sex determination mechanism in cannabis and hop
errNature Communications
IF15.7
err2026-05-26
err0
errOAAI
errSarah B. Carey; Philip C. Bentz; John T. Lovell; Laramie M. Akozbek; Zachary A. Myers; Walid Korani; Joshua S. Havill; Lillian Padgitt-Cobb; Ryan C. Lynch; Nicholas Allsing; Jack Mangels; Zachary Stansell; George M. Stack; Tyler Gordon; Austin Osmanski; Katherine A. Easterling; Leonardo R. Orozco; Zach E. Marcus; Haley Hale; Hannah McCoy; Zachary Meharg; Jane Grimwood; Lawrence B. Smart; Daniela Vergara; Rafael F. Guerrero; Nolan C. Kane; Rich Fletcher; John K. McKay; Todd P. Michael; Gary J. Muehlbauer; Josh Clevenger; Alex Harkess
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errSave
Monoallelic and biallelic KDM5A variants identified in patients with autism spectrum disorder
errHuman Genetics and Genomics Advances
IF3.6
err2026-05-23
err0
errOAAI
errEl Hayek, Lauretta; Gogate, Ashlesha; Chen, Wei-Chen; Kaur, Kiran; Zaki, Maha S.; De Wachter, Matthias; Van Schil, Kristof; Dublin-Ryan, Leeran; Zamani, Mina; Bartos, Meghan N.; Hiatt, Susan M.; Courdier, Cecile; Michaud, Vincent; Kenny, Janna; Day, Michael; Pang, Lewis; Nasab, Mahya Ebrahimi; Manshadi, Seyed Ali Madani; Eslahi, Atieh; Rasoul, Masoomeh Ale; Sanchez-Mendoza, Eduardo Humberto; DeLuca, Charles; Marafi, Dana; Stevens, Servi J. C.; Ivanovski, Ivan; Frey, Tanja; Steindl, Katharina; Rauch, Anita; O'Connor, Kaitlyn; Velinov, Milen; Shen, Xiaoming; Janssen, Etienne J. M.; Sedighzadeh, Sahar; Kordi-Tamandani, Dor Mohammad; Khajeh, Ali; Elshafie, Reem M.; Bastaki, Laila; Misra, Vinod K.; Firoozfar, Zahra; Goldenberg, Paula C.; Toosi, Mehran Beiraghi; Mojarrad, Majid; Kavanagh, Karl; Koboldt, Daniel C.; Margot, Henri; Hurst, Anna C. E.; Weber, Axel; Bergmann, Carsten; Houlden, Henry; Maroofian, Reza; Weis, Denisa; Ceulemans, Berten; Chahrour, Maria H.
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Compilation and utilization of a sorghum transcriptome compendium for gene regulatory network analysis and crop trait engineering
errThe Plant Journal
IF0
err2026-05-20
err0
errOAAI
errPriscilla D. Glenn; Brian A. McKinley; Kerrie Barry; Jeremy Schmutz; John E. Mullet
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Higher copy number of an Arachis hypogaea glutamate receptor-like candidate gene is associated with increased resistance to tomato spotted wilt virus
errCrop Science
IF1.9
err2026-05-01
err0
PREAI
errWebb, S.; Chu, Y.; Biswal, A. K.; Korani, W.; Botton, S.; Pokhrel, S.; Thompson, E.; Guo, B.; Culbreath, A. K.; Clevenger, J.; Holbrook, C. C.; Ozias-Akins, P.
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errSave
Integrative genomic and functional analyses reveal NINL as a modulator of tau aggregation
erralzheimer's & dementia
IF0
err2026-04-09
err0
errOAAI
errSamantha K. Swift; Guangming Huang; J. Nicholas Cochran; Ricardo D'Oliveira Albanus; Miguel A. Minaya; Patricia A. Castruita; Rui Zhang; Katherine J. Miller; Emma Starr; Grant Galasso; Jacob A. Marsh; Aimee W. Kao; Oscar Harari; Jennifer S. Yokoyama; Celeste M. Karch
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errSave
Long-read Iso-Seq re-annotation of the Pyrus communis 'Bartlett' doubled haploid genome
errTREE GENETICS & GENOMES
IF1.6
err2026-04-01
err0
PREAI
errEilers, Jon; Zhang, Huiting; Gottschalk, Christopher; Williams, Melissa; Grimwood, Jane; Harkess, Alex; Honaas, Loren; Waite, Jessica M.
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Implementing Genomic Medicine in Primary Care: A Convergent Mixed Method Case Study
errJournal of Evaluation in Clinical Practice
IF2.1
err2026-03-01
err0
PREAI
errHeffernan, Emory W.; Hearld, Kristine R.; Moss, Irene P.; East, Kelly M.; Asif, Irfan M.; Kelley, Whitley V.; Delaney, Erin W.; Cooper, Greg M.; Korf, Bruce R.; Limdi, Nita A.; Hearld, Larry R.
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errSave
Challenges and Errors in Genetic Testing: The Sixth Case Series
errCancer Journal
IF2.2
err2026-03-01
err0
PREAI
errFarmer, Meagan; McDonald, Claire; Berry, Darcy K.; Carr, Danielle; Coleman, Tanner F.; Goldstein, Matthew J.; Haskins, Rebecca; Kenney, Jessica; Murphy, Kerri; Waggoner, Rebecca; Zaretsky, Leah; Bonadies, Danielle; Matloff, Ellen
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errSave
Gene and genome duplications have contrasting impacts on biosynthetic and flower developmental pathways in California poppy
errPlant Cell
IF11.6
err2026-03-01
err0
PREAI
errRoessner, Le-Han; Roessner, Clemens; Kong, Doudou; Lotz, Dominik; Weisert, Andrea; Yamada, Yasuyuki; Sato, Fumihiko; Davies, Kevin; Rupp, Oliver; Fuchs, Joerg; Baldwin, Ethan A.; Lovell, John; McKain, Michael R.; Barry, Kerrie; Bruna, Tomas; Talag, Jayson; Jenkins, Jerry; Walstead, Rachel; Grimwood, Jane; Schmutz, Jeremy; Leebens-Mack, James H.; Becker, Annette
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A haplotype-resolved, chromosome-scale genome assembly for the southern live oak, Quercus virginiana
errG3-Genes Genomes Genetics
IF2.2
err2026-03-01
err0
PREAI
errAkozbek, Laramie; Meharg, Zachary; Abendroth-Mcghee, Jillian; Akinsipe, Tosin; Dhakal, Rijan; Gladstone, Nicholas; Pervaiz, Zahida; Patel, Sejal; Rossi, Giovani; Rutland, Claudia Ann; Bendickson, Caroline; Kranz, Adam; Martinson, Ellen O.; Egan, Scott P.; Feltus, F. Alex; Clarke, David J.; Lovell, John T.; Webber, Jenell; Boston, Lori Beth; Hale, Haley; McCoy, Hannah; Grimwood, Jane; Carey, Sarah B.; Goertzen, Leslie; Harkess, Alex
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Mitochondrial Genome Resource for the Highly Aflatoxigenic Aspergillus flavus Isolate AF13
errPHYTOFRONTIERS
IF1.1
err2026-03-01
err0
PREAI
errJoson, Santiago Emil A.; Clevenger, Josh P.; Vaughn, Justin N.; Guo, Baozhu; Fountain, Jake C.
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errSave
Rhythmic Mechanisms Governing CAM Photosynthesis in Kalanchoe fedtschenkoi: High-Resolution Temporal Transcriptomics
errInternational Journal of Molecular Sciences
IF4.9
err2026-01-30
err0
errOAAI
errRongbin Hu; Sara Jawdy; Avinash Sreedasyam; Anna Lipzen; Mei Wang; Vivian Ng; Christopher Daum; Keykhosrow Keymanesh; Degao Liu; Alex Hu; Asher Pasha; Nicholas J. Provart; Anne M. Borland; Timothy J. Tschaplinski; Gerald A. Tuskan; Jeremy Schmutz; Xiaohan Yang
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errSave
Evolutionary and methodological considerations when interpreting gene presence–absence variation in pangenomes
errNAR Genomics and Bioinformatics
IF2.8
err2026-01-30
err0
errOAAI
errTomáš Brůna; Avinash Sreedasyam; Avril M Harder; John T Lovell
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errSave
De novo variants in the splicing factor gene SF3B1 are associated with neurodevelopmental disorders
errNature Communications
IF15.7
err2026-01-23
err0
errOAAI
errKevin Uguen; Tiffany Bergot; Marie-Pier Scott-Boyer; Solène Chapalain; Camille Desdouets; Séverine Commet; Changlian Zhu; Yiran Xu; Yangong Wang; Tony Roscioli; Frederic Tran-Mau-Them; Laurence Faivre; Julien Maraval; Julian Delanne; Anne-Sophie Denommé-Pichon; Antonio Vitobello; Céline Jost; Marc Planes; Susan Hiatt; Patricia Wheeler; Claudia Gonzaga-Jauregui; Heng Wang; Baozhong Xin; Valerie Sency; Michael C. Kruer; Somayeh Bakhtiari; Patrick Sulem; Cynthia Curry; Trine Prescott; Gertrud Strobl-Wildemann; Theresa Brunet; Martine Doco Fenzy; Thomas Courtin; Céline Poirsier; Trine Bjørg Hammer; Christina D. Fenger; Melissa MacPherson; Kosuke Izumi; Jacqueline Leonard; Dong Li; Elaine H. Zackai; Ian A. Glass; Scott Ward; Philippe M. Campeau; Maria Carla Hermida Borroto; Laurence Le Moigno; Hilde Van Esch; Liesbeth De Waele; Daniel G. Calame; James R. Lupski; Giulia Barcia; Cristina Peduto; Pauline Planté-Bordeneuve; Lucie Dupuis; Roberto Mendoza-Londono; Dimitri J. Stavropoulos; Jennifer Gillibert-Duplantier; Thomas Besnard; Laura Do Souto Ferreira; Benjamin Cogné; Stéphane Bézieau; Arnaud Droit; Laurent Corcos; Eric Lippert; Claude Férec; Sebastien Küry; Delphine G. Bernard
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Trait Mapping Utilizing a Newly Constructed Genome for Allohexaploid Invasive Eurasian Watermilfoil (Myriophyllum spicatum) Reveals a Non-Target Site QTL Associated With Fluridone Resistance
errEvolutionary Applications
IF3.2
err2026-01-09
err0
errOAAI
errHannay, Del; Chorak, Gregory M.; Harkess, Alex; Clevenger, Josh; Cuperus, Josh T.; Hale, Haley; Akozbek, Laramie; Meharg, Zachary; Carey, Sarah B.; Myers, Zachary; Queitsch, Christine; Stamatoyannopoulos, Arianna; Thum, Ryan A.
errShare
errSave