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Toni Gabaldón

barcelona supercomputing centre

93H-index
591Paper Count
4.6WCitation Count
Published Papers 227
Publication Date
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Genome-wide atlas of lncRNAs in Mucorales reveals conserved regulators essential for fungal viability and development
errCell Reports
IF6.9
err2026-07-03
err0
errOAAI
errGhizlane Tahiri; Hrant Hovhannisyan; Carlos Lax; Eusebio Navarro; Toni Gabaldón; Francisco E. Nicolás; Victoriano Garre
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Gene ancestries reveal diverse microbial associations during eukaryogenesis
errNature
IF48.5
err2026-06-10
err0
errOAAI
errMoisès Bernabeu; Saioa Manzano-Morales; Marina Marcet-Houben; Toni Gabaldón
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errSave
Signatures of gene transfer in the parallel evolution of osmotrophic specialization in eukaryotes
errNature Ecology & Evolution
IF14.5
err2026-05-25
err0
errOAAI
errEduard Ocaña-Pallarès; Thomas A. Richards; Toni Gabaldón; Gergely J. Szöllősi
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Phylogenomics of Asgard archaea reveals a unique blend of prokaryotic-like horizontal transfer and eukaryotic-like gene duplication
errNature Communications
IF15.7
err2026-04-10
err0
errOAAI
errSaioa Manzano-Morales; Toni Gabaldón
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Functional specialization of Ca2+-binding motifs in human MICU1
errInternational Journal of Biological Macromolecules
IF8.5
err2026-02-03
err0
PREAI
errLeandro Matías Sommese; Nicolás Palopoli; Maria Silvina Fornasari; Gustavo Parisi; Toni Gabaldón; Ana Julia Velez Rueda
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Growth promotion of milk-associated Candida zeylanoides by a cyclic lipopeptide produced by Pseudomonas
errISME Journal
IF10
err2026-01-01
err1
PREAI
errWasmuth, Ina; Ibrahim, Anan; Kohler, Phil; Hovhannisyan, Hrant; Marcet-Houben, Marina; Gabaldon, Toni; Tsolmon, Soninkhishig; Warinner, Christina; Stallforth, Pierre
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Effects of removable clear dental aligners on the composition of the oral microbiome
errJOURNAL OF ORAL MICROBIOLOGY
IF5.5
err2025-12-31
err0
PREAI
errPeregrina, Sara; Aubalat, Andrea Peiro; Manohar, Avie; Benavente, Alicia; Torres-Carvajal, Martha; Gabaldon, Toni
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errSave
MeTAline: enabling reproducible and scalable metagenomic analyses
errNAR GENOMICS AND BIOINFORMATICS
IF2.8
err2025-12-01
err0
errOAAI
errKhannous-Lleiffe, Olfat; Fuentes-Palacios, Diego; Majer, Daniel; Gabaldon, Toni
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errSave
Phylogeny-aware Simulations Suggest a Low Impact of Unsampled Lineages in the Inference of Gene Flow During Eukaryogenesis
errGENOME BIOLOGY AND EVOLUTION
IF2.8
err2025-11-01
err0
PREAI
errBernabeu, Moises; Manzano-Morales, Saioa; Gabaldon, Toni
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Identification of a Differential Microbiological Signature of Extended-Spectrum ß-Lactamases Producing Escherichia Carriers in Spanish Community Children
errMicrobiologyOpen
IF4.6
err2025-10-29
err0
errOAAI
errMartina Cardinali-Benigni; Olfat Khannous-Lleiffe; Ester Saus; David Carmena; Michael J. McConnell; Toni Gabaldón; Mireia López-Siles
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errSave
A timetree of Fungi dated with fossils and horizontal gene transfers
errNature Ecology & Evolution
IF14.5
err2025-10-01
err0
errOAAI
errLénárd L. Szánthó; Zsolt Merényi; Philip Donoghue; Toni Gabaldón; László G. Nagy; Gergely J. Szöllősi; Eduard Ocaña-Pallarès
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errSave
The Biodiversity Cell Atlas: mapping the tree of life at cellular resolution
errNature
IF48.5
err2025-09-24
err0
PREAI
errArnau Sebé-Pedrós; Amos Tanay; Mara K. N. Lawniczak; Detlev Arendt; Stein Aerts; John Archibald; Maria Ina Arnone; Mark Blaxter; Phillip Cleves; Susana M. Coelho; Mafalda Dias; Casey Dunn; Anamaria Elek; Jonathan Frazer; Toni Gabaldón; Jesse Gillis; Xavier Grau-Bové; Roderic Guigó; Oliver Hobert; Jaime Huerta-Cepas; Manuel Irimia; Allon Klein; Harris Lewin; Christopher J. Lowe; Heather Marlow; Jacob M. Musser; László G. Nagy; Sebastián R. Najle; Lior Pachter; Sadye Paez; Irene Papatheodorou; Michael J. Passalacqua; Nikolaus Rajewsky; Seung Y. Rhee; Thomas A. Richards; Tatjana Sauka-Spengler; Lauren M. Saunders; Eve Seuntjens; Jordi Solana; Yuyao Song; Ulrich Technau; Bo Wang
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errSave
The multiomics blueprint of the individual with the most extreme lifespan
errCell Reports Medicine
IF10.6
err2025-09-24
err0
errOAAI
errEloy Santos-Pujol; Aleix Noguera-Castells; Marta Casado-Pelaez; Carlos A. García-Prieto; Claudia Vasallo; Ignacio Campillo-Marcos; Carlos Quero-Dotor; Eva Crespo-García; Alberto Bueno-Costa; Fernando Setién; Gerardo Ferrer; Veronica Davalos; Elisabetta Mereu; Raquel Pluvinet; Carles Arribas; Carolina de la Torre; Francisco Villavicencio; Lauro Sumoy; Isabel Granada; Natalie S. Coles; Pamela Acha; Francesc Solé; Mar Mallo; Caterina Mata; Sara Peregrina; Toni Gabaldón; Marc Llirós; Meritxell Pujolassos; Robert Carreras-Torres; Aleix Lluansí; Librado Jesús García-Gil; Xavier Aldeguer; Sara Samino; Pol Torné; Josep Ribalta; Montse Guardiola; Núria Amigó; Oscar Yanes; Paula Martínez; Raúl Sánchez-Vázquez; Maria A. Blasco; Jose Oviedo; Bernardo Lemos; Julia Rius-Bonet; Marta Torrubiano; Marta Massip-Salcedo; Kamal A. Khidir; Thong Huy Cao; Paulene A. Quinn; Donald J.L. Jones; Salvador Macip; Eva Brigos-Barril; Mauricio Moldes; Fabio Barteri; Gerard Muntané; Hafid Laayouni; Arcadi Navarro; Manel Esteller
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Epistasis at the cell surface: what is the role of Erg3 loss-of-function in acquired echinocandin resistance?
errMBIO
IF4.7
err2025-09-01
err0
errOAAI
errCarolus, Hans; Diaz-Garcia, Judith; Biriukov, Vladislav; Jacobs, Stef; Sofras, Dimitrios; Pageau, Alicia; Lobo Romero, Celia; Vinken, Lore; Escribano, Pilar; Guinea, Jesus; Lagrou, Katrien; Landry, Christian R.; Gabaldon, Toni; Van Dijck, Patrick
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Probabilistic modelling improves relative dating from gene phylogenies
errMethods in Ecology and Evolution
IF6.2
err2025-08-25
err0
errOAAI
errMoisès Bernabeu; Carmen Armero; Toni Gabaldón
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errSave
Host albumin redirects Candida albicans metabolism to engage an alternative pathogenicity pathway
errNature Communications
IF15.7
err2025-07-12
err0
errOAAI
errSophia U. J. Hitzler; Candela Fernández-Fernández; Kerstin Günther; Axel Dietschmann; Hrant Hovhannisyan; Anna Möslinger; Sophie Austermeier; Beatriz Cristóvão; Gianluca Vascelli; Teresa Zelante; Marina Pekmezović; Bernardo Ramírez-Zavala; Joachim Morschhäuser; Oliver Werz; Toni Gabaldón; Paul M. Jordan; Slavena Vylkova; Mark S. Gresnigt
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errSave
Newly Developed Structure-Based Methods Do Not Outperform Standard Sequence-Based Methods for Large-Scale Phylogenomics
errMOLECULAR BIOLOGY AND EVOLUTION
IF5.3
err2025-07-01
err4
errOAAI
errMutti, Giacomo; Ocana-Pallares, Eduard; Gabaldon, Toni
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Simple large-scale quantitative phenotyping and antimicrobial susceptibility testing with Q-PHAST
errNATURE PROTOCOLS
IF16
err2025-05-12
err0
PREAI
errNunez-Rodriguez, Juan Carlos; Schikora-Tamarit, Miquel angel; Ksiezopolska, Ewa; Gabaldon, Toni
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Insights into the origin, hybridisation and adaptation of Candida metapsilosis hybrid pathogens
errPLOS PATHOGENS
IF4.9
err2025-01-17
err0
errOAAI
errdel Olmo, Valentina; Redondo-Rio, Alvaro; Garcia, Alicia Benavente; Limtong, Savitree; Saus, Ester; Gabaldon, Toni
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Acute stress triggers sex-dependent rapid alterations in the human small intestine microbiota composition
errFRONTIERS IN MICROBIOLOGY
IF4.5
err2025-01-15
err0
errOAAI
errRodino-Janeiro, Bruno K.; Khannous-Lleiffe, Olfat; Pigrau, Marc; Willis, Jesse R.; Salvo-Romero, Eloisa; Nieto, Adoracion; Exposito, Elba; Fortea, Marina; Pardo-Camacho, Cristina; Albert-Bayo, Merce; Gonzalez-Castro, Ana Maria; Guagnozzi, Danila; Martinez, Cristina; Lobo, Beatriz; Vicario, Maria; Santos, Javier; Gabaldon, Toni; Alonso-Cotoner, Carmen
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Research Directions

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Co-authors
Cooperation Journals
M
Manel Esteller
H-index: 165 · Papers: 1.6K
R
Rudolf Amann
H-index: 154 · Papers: 665
C
Carlos López-Otı́n
H-index: 147 · Papers: 689
W
Wolf Reik
H-index: 135 · Papers: 512
J
Joseph Heitman
H-index: 134 · Papers: 1.1K
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