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Arnau Sebé-Pedrós

barcelona institute of science and technology

35H-index
90Paper Count
5.4KCitation Count
Published Papers 40
Publication Date
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Diversity and evolution of chromatin regulatory states across eukaryotes
errNature Genetics
IF29
err2026-08-03
err0
PREAI
errCristina Navarrete; Sean A. Montgomery; Julen Mendieta; Ewa Księżopolska; Jim Renema; Cristina Chiva; Eduard Sabidó; David Lara-Astiaso; Arnau Sebé-Pedrós
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errSave
GeneExt: a gene model extension tool for enhanced single-cell RNA-seq analysis
errBioinformatics
IF5.4
err2026-03-02
err0
errOAAI
errGrygoriy Zolotarov; Xavier Grau-Bové; Arnau Sebé-Pedrós; null
errShare
errSave
Decoding cnidarian cell type gene regulation
errNature Ecology & Evolution
IF14.5
err2025-12-22
err0
PREAI
errAnamaria Elek; Marta Iglesias; Lukas Mahieu; Grygoriy Zolotarov; Xavier Grau-Bové; Stein Aerts; Arnau Sebé-Pedrós
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errSave
Adenine DNA methylation associated with transcriptionally permissive chromatin is widespread across eukaryotes
errNature Genetics
IF29
err2025-11-18
err0
errOAAI
errPedro Romero Charria; Cristina Navarrete; Vladimir Ovchinnikov; Lan Xu; Luke A. Sarre; Victoria Shabardina; Ewa Ksiezopolska; Elena Casacuberta; David Lara-Astiaso; Arnau Sebé-Pedrós; Alex de Mendoza
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errSave
The evolution of facultative symbiosis in stony corals
errNature
IF48.5
err2025-10-15
err0
PREAI
errShani Levy; Xavier Grau-Bové; Iana V. Kim; Sebastian R. Najle; Ewa Księżopolska; Anamaria Elek; Laia Montes-Espuña; Sean A. Montgomery; Tali Mass; Arnau Sebé-Pedrós
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errSave
The Biodiversity Cell Atlas: mapping the tree of life at cellular resolution
errNature
IF48.5
err2025-09-24
err0
PREAI
errArnau Sebé-Pedrós; Amos Tanay; Mara K. N. Lawniczak; Detlev Arendt; Stein Aerts; John Archibald; Maria Ina Arnone; Mark Blaxter; Phillip Cleves; Susana M. Coelho; Mafalda Dias; Casey Dunn; Anamaria Elek; Jonathan Frazer; Toni Gabaldón; Jesse Gillis; Xavier Grau-Bové; Roderic Guigó; Oliver Hobert; Jaime Huerta-Cepas; Manuel Irimia; Allon Klein; Harris Lewin; Christopher J. Lowe; Heather Marlow; Jacob M. Musser; László G. Nagy; Sebastián R. Najle; Lior Pachter; Sadye Paez; Irene Papatheodorou; Michael J. Passalacqua; Nikolaus Rajewsky; Seung Y. Rhee; Thomas A. Richards; Tatjana Sauka-Spengler; Lauren M. Saunders; Eve Seuntjens; Jordi Solana; Yuyao Song; Ulrich Technau; Bo Wang
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errSave
Chromatin loops are an ancestral hallmark of the animal regulatory genome
errNATURE
IF48.5
err2025-05-07
err0
errOAAI
errKim, Iana V.; Navarrete, Cristina; Grau-Bove, Xavier; Iglesias, Marta; Elek, Anamaria; Zolotarov, Grygoriy; Bykov, Nikolai S.; Montgomery, Sean A.; Ksiezopolska, Ewa; Canas-Armenteros, Didac; Soto-Angel, Joan J.; Leys, Sally P.; Burkhardt, Pawel; Suga, Hiroshi; de Mendoza, Alex; Marti-Renom, Marc A.; Sebe-Pedros, Arnau
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errSave
DNA methylation enables recurrent endogenization of giant viruses in an animal relative
errSCIENCE ADVANCES
IF12.5
err2024-07-12
err2
errOAAI
errSarre, Luke A.; Kim, Iana V.; Ovchinnikov, Vladimir; Olivetta, Marine; Suga, Hiroshi; Dudin, Omaya; Sebe-Pedros, Arnau; de Mendoza, Alex
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errSave
An amphioxus neurula stage cell atlas supports a complex scenario for the emergence of vertebrate head mesoderm
errNATURE COMMUNICATIONS
IF15.7
err2024-05-29
err2
errOAAI
errGrau-Bove, Xavier; Subirana, Lucie; Meister, Lydvina; Soubigou, Anael; Neto, Ana; Elek, Anamaria; Naranjo, Silvia; Fornas, Oscar; Gomez-Skarmeta, Jose Luis; Tena, Juan J.; Irimia, Manuel; Bertrand, Stephanie; Sebe-Pedros, Arnau; Escriva, Hector
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errSave
Single cell atlas of Xenoturbella bocki highlights limited cell-type complexity
errNATURE COMMUNICATIONS
IF15.7
err2024-03-19
err0
errOAAI
errRobertson, Helen E.; Sebe-Pedros, Arnau; Saudemont, Baptiste; Loe-Mie, Yann; Zakrzewski, Anne-C.; Grau-Bove, Xavier; Mailhe, Marie-Pierre; Schiffer, Philipp; Telford, Maximilian J.; Marlow, Heather
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errSave
Systematic benchmarking of single-cell ATAC-sequencing protocols
errNATURE BIOTECHNOLOGY
IF41.7
err2023-08-03
err13
errOAAI
errDe Rop, Florian V.; Hulselmans, Gert; Flerin, Chris; Soler-Vila, Paula; Rafels, Albert; Christiaens, Valerie; Gonzalez-Blas, Carmen Bravo; Marchese, Domenica; Caratu, Ginevra; Poovathingal, Suresh; Rozenblatt-Rosen, Orit; Slyper, Michael; Luo, Wendy; Muus, Christoph; Duarte, Fabiana; Shrestha, Rojesh; Bagdatli, S. Tansu; Corces, M. Ryan; Mamanova, Lira; Knights, Andrew; Meyer, Kerstin B.; Mulqueen, Ryan; Taherinasab, Akram; Maschmeyer, Patrick; Pezoldt, Jörn; Lambert, Camille Lucie Germaine; Iglesias, Marta; Najle, Sebastian R.; Dossani, Zain Y.; Martelotto, Luciano G.; Burkett, Zach; Lebofsky, Ronald; Martin-Subero, Jose Ignacio; Pillai, Satish; Sebe-Pedros, Arnau; Deplancke, Bart; Teichmann, Sarah A.; Ludwig, Leif S.; Braun, Theodore P.; Adey, Andrew C.; Greenleaf, William J.; Buenrostro, Jason D.; Regev, Aviv; Aerts, Stein; Heyn, Holger
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errSave
Pancreas agenesis mutations disrupt a lead enhancer controlling a developmental enhancer cluster
errDEVELOPMENTAL CELL
IF8.7
err2022-08-01
err9
errOAAI
errMiguel-Escalada, Irene; Maestro, Miguel Angel; Balboa, Diego; Elek, Anamaria; Bernal, Aina; Bernardo, Edgar; Grau, Vanessa; Garcia-Hurtado, Javier; Sebe-Pedros, Arnau; Ferrer, Jorge
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errSave
A phylogenetic and proteomic reconstruction of eukaryotic chromatin evolution
errNATURE ECOLOGY & EVOLUTION
IF14.5
err2022-06-09
err31
errOAAI
errGrau-Bove, Xavier; Navarrete, Cristina; Chiva, Cristina; Pribasnig, Thomas; Anto, Meritxell; Torruella, Guifre; Galindo, Luis Javier; Lang, Bernd Franz; Moreira, David; Lopez-Garcia, Purificacion; Ruiz-Trillo, Inaki; Schleper, Christa; Sabido, Eduard; Sebe-Pedros, Arnau
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errSave
Evolutionary cell type mapping with single-cell genomics
errTRENDS IN GENETICS
IF16.3
err2021-10-01
err35
errOAAI
errTanay, Amos; Sebe-Pedros, Arnau
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errSave
Orthology Clusters from Gene Trees with Possvm
errMOLECULAR BIOLOGY AND EVOLUTION
IF5.3
err2021-08-05
err11
errOAAI
errGrau-Bove, Xavier; Sebe-Pedros, Arnau
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errSave
ACME dissociation: a versatile cell fixation-dissociation method for single-cell transcriptomics
errGENOME BIOLOGY
IF9.4
err2021-04-08
err43
errOAAI
errGarcia-Castro, Helena; Kenny, Nathan J.; Iglesias, Marta; Alvarez-Campos, Patricia; Mason, Vincent; Elek, Anamaria; Schonauer, Anna; Sleight, Victoria A.; Neiro, Jakke; Aboobaker, Aziz; Permanyer, Jon; Irimia, Manuel; Sebe-Pedros, Arnau; Solana, Jordi
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errSave
Ectopic activation of GABAB receptors inhibits neurogenesis and metamorphosis in the cnidarian Nematostella vectensis
errNATURE ECOLOGY & EVOLUTION
IF14.5
err2020-11-09
err9
PREAI
errLevy, Shani; Brekhman, Vera; Bakhman, Anna; Malik, Assaf; Sebe-Pedros, Arnau; Kosloff, Mickey; Lotan, Tamar
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errSave
IL18 signaling promotes homing of mature Tregs into the thymus
errELIFE
IF0
err2020-07-20
err23
errOAAI
errPeligero-Cruz, Cristina; Givony, Tal; Sebe-Pedros, Arnau; Dobes, Jan; Kadouri, Noam; Nevo, Shir; Roncato, Francesco; Alon, Ronen; Goldfarb, Yael; Abramson, Jakub
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errSave
A single-cell view on alga-virus interactions reveals sequential transcriptional programs and infection states
errSCIENCE ADVANCES
IF12.5
err2020-05-22
err43
errOAAI
errKu, Chuan; Sheyn, Uri; Sebe-Pedros, Arnau; Ben-Dor, Shifra; Schatz, Daniella; Tanay, Amos; Rosenwasser, Shilo; Vardi, Assaf
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errSave
MetaCell: analysis of single-cell RNA-seq data using K-nn graph partitions
errGENOME BIOLOGY
IF9.4
err2019-10-11
err198
errOAAI
errBaran, Yael; Bercovich, Akhiad; Sebe-Pedros, Arnau; Lubling, Yaniv; Giladi, Amir; Chomsky, Elad; Meir, Zohar; Hoichman, Michael; Lifshitz, Aviezer; Tanay, Amos
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Research Directions

No research directions
Co-authors
Cooperation Journals
A
Aviv Regev
H-index: 208 · Papers: 965
S
Sarah A. Teichmann
H-index: 141 · Papers: 677
R
Roderic Guigó
H-index: 126 · Papers: 704
I
Ido Amit
H-index: 111 · Papers: 476
R
R. Alon
H-index: 109 · Papers: 609
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