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Aleksei Aksimentiev

Center for Biophysics and Quantitative Biology

74H-index
350Paper Count
1.9WCitation Count
Published Papers 169
Publication Date
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How We Simulate Nanopores
errSmall Methods
IF9.1
err2026-08-04
err0
errOAAI
errBehzad Mehrafrooz; Xavier Mleziva; Meng Xu; Melika Shekari; Christopher Maffeo; Aleksei Aksimentiev
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errSave
Engineering a Biological Nanopore for Monitoring Protein Dynamics and Conformational Changes at the Single-Molecule Level
errACS Nano
IF16
err2026-06-22
err0
PREAI
errKumar Sarthak; Veerle Van Meervelt; Misha Soskine; Giovanni Maglia; Aleksei Aksimentiev
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errSave
DNA-Lipid Nanodiscs with a Polyethylene Glycol Interface
errJournal of the American Chemical Society
IF15.6
err2026-05-04
err0
errOAAI
errSoumya Chandrasekhar; Christopher Maffeo; Sanjai Karanth; Rachel Bricker; Joy Kabuga; Diana Patricia Nunes Gonçalves; Aleksei Aksimentiev; Thorsten L. Schmidt
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errSave
Nanopores with dynamic pore opening diameter
errfaraday discuss.
IF0
err2026-04-29
err0
PREAI
errSavannah Silva †; Xavier Mleziva †; Anthony Dougman Cho; Christopher Maffeo; Bernadeta Srijanto; Ivan V. Vlassiouk; Ethan Cao; Aleksei Aksimentiev; Zuzanna S. Siwy
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errSave
Single-Molecule Electron Transport in Peptoids
errThe Journal of Physical Chemistry B
IF2.9
err2026-03-04
err0
errOAAI
errBrittany Prempin; Rajarshi Samajdar; Hemani Chhabra; Moeen Meigooni; Aleksei Aksimentiev; Emad Tajkhorshid; Jeffrey S. Moore; Charles M. Schroeder
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errSave
A Site-Specific Self-Association of a Protein Hub Drives Its Phase Separation
errACS CHEMICAL BIOLOGY
IF3.8
err2025-12-01
err0
PREAI
errAhmad, Mohammad; Wang, Yazheng; Krishnan, Siddharth; Imran, Ali; Aksimentiev, Aleksei; Movileanu, Liviu
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errSave
Full-length protein classification via cysteine fingerprinting in solid-state nanopores
errNature Nanotechnology
IF34.9
err2025-09-24
err0
PREAI
errNeeraj Soni; Zohar Rosenstock; Navneet C. Verma; Krishnan Siddharth; Noam Talor; Jingqian Liu; Barak Marom; Anatoly B. Kolomeisky; Aleksei Aksimentiev; Amit Meller
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errSave
Single-molecule dynamic structural biology with vertically arranged DNA on a fluorescence microscope
errNATURE METHODS
IF32.1
err2024-11-08
err1
PREAI
errSzalai, Alan M.; Ferrari, Giovanni; Richter, Lars; Hartmann, Jakob; Kesici, Merve-Zeynep; Ji, Bosong; Coshic, Kush; Dagleish, Martin R. J.; Jaeger, Annika; Aksimentiev, Aleksei; Tessmer, Ingrid; Kaminska, Izabela; Vera, Andres M.; Tinnefeld, Philip
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errSave
Atomic view of photosynthetic metabolite permeability pathways and confinement in synthetic carboxysome shells
errPROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
IF9.1
err2024-11-01
err1
PREAI
errSarkar, Daipayan; Maffeo, Christopher; Sutter, Markus; Aksimentiev, Aleksei; Kerfeld, Cheryl A.; Vermaas, Josh V.
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errSave
Cation-induced intramolecular coil-to-globule transition in poly(ADP-ribose)
errNATURE COMMUNICATIONS
IF15.7
err2024-09-10
err1
errOAAI
errWang, Tong; Coshic, Kush; Badiee, Mohsen; McDonald, Maranda R.; Aksimentiev, Aleksei; Pollack, Lois; Leung, Anthony K. L.
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errSave
Electric Field of DNA in Solution: Who Is in Charge?
errPHYSICAL REVIEW X
IF15.7
err2024-09-05
err0
errOAAI
errHedley, Jonathan G.; Coshic, Kush; Aksimentiev, Aleksei; Kornyshev, Alexei A.
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errSave
A lumen-tunable triangular DNA nanopore for molecular sensing and cross-membrane transport
errNATURE COMMUNICATIONS
IF15.7
err2024-08-22
err0
errOAAI
errLiu, Xiaoming; Liu, Fengyu; Chhabra, Hemani; Maffeo, Christopher; Chen, Zhuo; Huang, Qiang; Aksimentiev, Aleksei; Arai, Tatsuo
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errSave
Electro-osmotic Flow Generation via a Sticky Ion Action
errACS NANO
IF16
err2024-06-04
err2
errOAAI
errMehrafrooz, Behzad; Yu, Luning; Pandey, Laxmi; Siwy, Zuzanna S.; Wanunu, Meni; Aksimentiev, Aleksei
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errSave
Nanopore Translocation Reveals Electrophoretic Force on Noncanonical RNA:DNA Double Helix
errACS NANO
IF16
err2024-06-01
err0
errOAAI
errBoskovic, Filip; Maffeo, Christopher; Patino-Guillen, Gerardo; Tivony, Ran; Aksimentiev, Aleksei; Keyser, Ulrich F.
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errSave
Single molecule delivery into living cells
errNATURE COMMUNICATIONS
IF15.7
err2024-05-23
err1
errOAAI
errChau, Chalmers C.; Maffeo, Christopher M.; Aksimentiev, Aleksei; Radford, Sheena E.; Hewitt, Eric W.; Actis, Paolo
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errSave
Dehydrated Biomimetic Membranes with Skinlike Structure and Function
errACS APPLIED MATERIALS & INTERFACES
IF8.2
err2024-04-10
err1
PREAI
errOh, Hyeonji; Tu, Yu-Ming; Samineni, Laximicharan; De Respino, Sophie; Mehrafrooz, Behzad; Joshi, Himanshu; Massenburg, Lynnicia; Lopez-Marques, Horacio; Elessawy, Nada; Song, Woochul; Behera, Harekrushna; Dhiman, Raman; Boorla, Veda Sheersh; Kher, Kartik; Lin, Yi-Chih; Maranas, Costas; Aksimentiev, Aleksei; Freeman, Benny D.; Kumar, Manish
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errSave
A DNA turbine powered by a transmembrane potential across a nanopore
errNATURE NANOTECHNOLOGY
IF34.9
err2023-10-26
err20
errOAAI
errShi, Xin; Pumm, Anna-Katharina; Maffeo, Christopher; Kohler, Fabian; Feigl, Elija; Zhao, Wenxuan; Verschueren, Daniel; Golestanian, Ramin; Aksimentiev, Aleksei; Dietz, Hendrik; Dekker, Cees
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Unidirectional single-file transport of full-length proteins through a nanopore (vol 41, pg 1130, 2023)
errNATURE BIOTECHNOLOGY
IF41.7
err2023-09-21
err1
errOAAI
errYu, Luning; Kang, Xinqi; Li, Fanjun; Mehrafrooz, Behzad; Makhamreh, Amr; Fallahi, Ali; Foster, Joshua C.; Aksimentiev, Aleksei; Chen, Min; Wanunu, Meni
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Sulfur-Containing Foldamer-Based Artificial Lithium Channels
errANGEWANDTE CHEMIE-INTERNATIONAL EDITION
IF16.9
err2023-08-17
err15
errOAAI
errShen, Jie; Deepa, R.; Li, Zhongyan; Oh, Hyeonji; Behera, Harekrushna; Joshi, Himanshu; Kumar, Manish; Aksimentiev, Aleksei; Zeng, Huaqiang
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errSave
Engineering Biological Nanopore Approaches toward Protein Sequencing
errACS NANO
IF16
err2023-07-25
err19
errOAAI
errWei, Xiaojun; Penkauskas, Tadas; Reiner, Joseph E.; Kennard, Celeste; Uline, Mark J.; Wang, Qian; Li, Sheng; Aksimentiev, Aleksei; Robertson, Joseph W. F.; Liu, Chang
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Research Directions

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Co-authors
Cooperation Journals
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Chuan He
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K
Klaus Schulten
H-index: 145 · Papers: 718
B
Benoı̂t Roux
H-index: 128 · Papers: 722
J
Jeffrey S. Moore
H-index: 126 · Papers: 852
A
A. K. Geǐm
H-index: 126 · Papers: 488
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