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Shayne D. Wierbowski

Pfizer

11H-index
27Paper Count
774Citation Count
Published Papers 12
Publication Date
Precision fragment addition: domain-specific DeepFrag2 models for smarter lead optimization
err2026-02-26
err0
errOAAI
errCésar R. García-Jacas; Harrison Green; Shayne D. Wierbowski; Jacob D. Durrant
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A comprehensive SARS-CoV-2-human protein-protein interactome reveals COVID-19 pathobiology and potential host therapeutic targets
err2022-10-10
err82
errOAAI
errZhou, Yadi; Liu, Yuan; Gupta, Shagun; Paramo, Mauricio, I; Hou, Yuan; Mao, Chengsheng; Luo, Yuan; Judd, Julius; Wierbowski, Shayne; Bertolotti, Marta; Nerkar, Mriganka; Jehi, Lara; Drayman, Nir; Nicolaescu, Vlad; Gula, Haley; Tay, Savas; Randall, Glenn; Wang, Peihui; Lis, John T.; Feschotte, Cedric; Erzurum, Serpil C.; Cheng, Feixiong; Yu, Haiyuan
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Deep learning methods for 3D structural proteome and interactome modeling
err2022-04-01
err13
errOAAI
errLee, Dongjin; Xiong, Dapeng; Wierbowski, Shayne; Li, Le; Liang, Siqi; Yu, Haiyuan
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A full-proteome, interaction-specific characterization of mutational hotspots across human cancers
err2021-12-28
err5
errOAAI
errChen, Siwei; Liu, Yuan; Zhang, Yingying; Wierbowski, Shayne D.; Lipkin, Steven M.; Wei, Xiaomu; Yu, Haiyuan
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Combining views for newly sequenced organisms
err2021-12-09
err0
PREAI
errZhang, Yingying; Wierbowski, Shayne D.; Yu, Haiyuan
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A 3D structural SARS-CoV-2-human interactome to explore genetic and drug perturbations
err2021-11-29
err22
errOAAI
errWierbowski, Shayne D.; Liang, Siqi; Liu, Yuan; Chen, You; Gupta, Shagun; Andre, Nicole M.; Lipkin, Steven M.; Whittaker, Gary R.; Yu, Haiyuan
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Structure-based validation can drastically underestimate error rate in proteome-wide cross-linking mass spectrometry studies
err2020-09-29
err24
errOAAI
errYugandhar, Kumar; Wang, Ting-Yi; Wierbowski, Shayne D.; Shayhidin, Elnur Elyar; Yu, Haiyuan
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Transcription imparts architecture, function and logic to enhancer units
err2020-09-21
err49
errOAAI
errTippens, Nathaniel D.; Liang, Jin; Leung, Alden King-Yung; Wierbowski, Shayne D.; Ozer, Abdullah; Booth, James G.; Lis, John T.; Yu, Haiyuan
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BraInMap Elucidates the Macromolecular Connectivity Landscape of Mammalian Brain (vol 10, pg 333, 2020)
err2020-08-01
err9
errOAAI
errPourhaghighi, Reza; Ash, Peter E. A.; Phanse, Sadhna; Goebels, Florian; Hu, Lucas Z. M.; Chen, Siwei; Zhang, Yingying; Wierbowski, Shayne D.; Boudeau, Samantha; Moutaoufik, Mohamed T.; Malty, Ramy H.; Malolepsza, Edyta; Tsafou, Kalliopi; Nathan, Aparna; Cromar, Graham; Guo, Hongbo; Al Abdullatif, Ali; Apicco, Daniel J.; Becker, Lindsay A.; Gitler, Aaron D.; Pulst, Stefan M.; Youssef, Ahmed; Hekman, Ryan; Havugimana, Pierre C.; White, Carl A.; Blum, Benjamin C.; Ratti, Antonia; Bryant, Camron D.; Parkinson, John; Lage, Kasper; Babu, Mohan; Yu, Haiyuan; Bader, Gary D.; Wolozin, Benjamin; Emili, Andrew
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A massively parallel barcoded sequencing pipeline enables generation of the first ORFeome and interactome map for rice
err2020-05-12
err17
errOAAI
errWierbowski, Shayne D.; Vo, Tommy V.; Falter-Braun, Pascal; Jobe, Timothy O.; Kruse, Lars H.; Wei, Xiaomu; Liang, Jin; Meyer, Michael J.; Akturk, Nurten; Rivera-Erick, Christen A.; Cordero, Nicolas A.; Paramo, Mauricio I.; Shayhidin, Elnur E.; Bertolotti, Marta; Tippens, Nathaniel D.; Akther, Kazi; Sharma, Rita; Katayose, Yuichi; Salehi-Ashtiani, Kourosh; Hao, Tong; Ronald, Pamela C.; Ecker, Joseph R.; Schweitzer, Peter A.; Kikuchi, Shoshi; Mizuno, Hiroshi; Hill, David E.; Vidal, Marc; Moghe, Gaurav D.; McCouch, Susan R.; Yu, Haiyuan
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BraInMap Elucidates the Macromolecular Connectivity Landscape of Mammalian Brain
err2020-04-01
err46
errOAAI
errPourhaghighi, Reza; Ash, Peter E. A.; Phanse, Sadhna; Goebels, Florian; Hu, Lucas Z. M.; Chen, Siwei; Zhang, Yingying; Wierbowski, Shayne D.; Boudeau, Samantha; Moutaoufik, Mohamed T.; Malty, Ramy H.; Malolepsza, Edyta; Tsafou, Kalliopi; Nathan, Aparna; Cromar, Graham; Guo, Hongbo; Al Abdullatif, Ali; Apicco, Daniel J.; Becker, Lindsay A.; Gitler, Aaron D.; Pulst, Stefan M.; Youssef, Ahmed; Hekman, Ryan; Havugimana, Pierre C.; White, Carl A.; Blum, Benjamin C.; Ratti, Antonia; Bryant, Camron D.; Parkinson, John; Lage, Kasper; Babu, Mohan; Yu, Haiyuan; Bader, Gary D.; Wolozin, Benjamin; Emili, Andrew
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Extensive disruption of protein interactions by genetic variants across the allele frequency spectrum in human populations
err2019-09-12
err47
errOAAI
errFragoza, Robert; Das, Jishnu; Wierbowski, Shayne D.; Liang, Jin; Tran, Tina N.; Liang, Siqi; Beltran, Juan F.; Rivera-Erick, Christen A.; Ye, Kaixiong; Wang, Ting-Yi; Yao, Li; Mort, Matthew; Stenson, Peter D.; Cooper, David N.; Wei, Xiaomu; Keinan, Alon; Schimenti, John C.; Clark, Andrew G.; Yu, Haiyuan
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