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Sharmishtaa Seshamani

Allen Institute for Brain Science

18H-index
65Paper Count
1.7KCitation Count
Published Papers 15
Publication Date
The synaptic architecture of layer 5 thick tufted excitatory neurons in mouse visual cortex
err2025-07-28
err0
errOAAI
errAgnes L. Bodor; Casey M. Schneider-Mizell; Chi Zhang; Leila Elabbady; Alex Mallen; Andi Bergeson; Derrick Brittain; JoAnn Buchanan; Daniel J. Bumbarger; Rachel Dalley; Clare Gamlin; Emily Joyce; Daniel Kapner; Sam Kinn; Gayathri Mahalingam; Sharmishtaa Seshamani; Shelby Suckow; Marc Takeno; Russel Torres; Wenjing Yin; J. Alexander Bae; Manuel A. Castro; Sven Dorkenwald; Akhilesh Halageri; Zhen Jia; Chris Jordan; Nico Kemnitz; Kisuk Lee; Kai Li; Ran Lu; Thomas Macrina; Eric Mitchell; Shanka Subhra Mondal; Shang Mu; Barak Nehoran; Sergiy Popovych; William Silversmith; Nicholas L. Turner; Szi-chieh Yu; William Wong; Jingpeng Wu; Brendan Celii; Luke Campagnola; Stephanie C. Seeman; Tim Jarsky; Naixin Ren; Anton Arkhipov; Jacob Reimer; H. Sebastian Seung; R. Clay Reid; Forrest Collman; Nuno Maçarico da Costa
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Inhibitory specificity from a connectomic census of mouse visual cortex (vol 640, pg 448, 2025)
errNATURE
IF48.5
err2025-05-19
err0
errOAAI
errSchneider-Mizell, Casey M.; Bodor, Agnes L.; Brittain, Derrick; Buchanan, Joann; Bumbarger, Daniel J.; Elabbady, Leila; Gamlin, Clare; Kapner, Daniel; Kinn, Sam; Mahalingam, Gayathri; Seshamani, Sharmishtaa; Suckow, Shelby; Takeno, Marc; Torres, Russel; Yin, Wenjing; Dorkenwald, Sven; Bae, J. Alexander; Castro, Manuel A.; Halageri, Akhilesh; Jia, Zhen; Jordan, Chris; Kemnitz, Nico; Lee, Kisuk; Li, Kai; Lu, Ran; Macrina, Thomas; Mitchell, Eric; Mondal, Shanka Subhra; Mu, Shang; Nehoran, Barak; Popovych, Sergiy; Silversmith, William; Turner, Nicholas L.; Wong, William; Wu, Jingpeng; Reimer, Jacob; Tolias, Andreas S.; Seung, H. Sebastian; Reid, R. Clay; Collman, Forrest; da Costa, Nuno Macarico
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Perisomatic ultrastructure efficiently classifies cells in mouse cortex
errNATURE
IF48.5
err2025-04-09
err7
errOAAI
errElabbady, Leila; Seshamani, Sharmishtaa; Mu, Shang; Mahalingam, Gayathri; Schneider-Mizell, Casey M.; Bodor, Agnes L.; Bae, J. Alexander; Brittain, Derrick; Buchanan, Joann; Bumbarger, Daniel J.; Castro, Manuel A.; Dorkenwald, Sven; Halageri, Akhilesh; Jia, Zhen; Jordan, Chris; Kapner, Dan; Kemnitz, Nico; Kinn, Sam; Lee, Kisuk; Li, Kai; Lu, Ran; Macrina, Thomas; Mitchell, Eric; Mondal, Shanka Subhra; Nehoran, Barak; Popovych, Sergiy; Silversmith, William; Takeno, Marc; Torres, Russel; Turner, Nicholas L.; Wong, William; Wu, Jingpeng; Yin, Wenjing; Yu, Szi-chieh; Seung, H. Sebastian; Reid, R. Clay; da Costa, Nuno Macarico
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Connectomics of predicted Sst transcriptomic types in mouse visual cortex
errNATURE
IF48.5
err2025-04-09
err5
errOAAI
errGamlin, Clare R.; Schneider-Mizell, Casey M.; Mallory, Matthew; Elabbady, Leila; Gouwens, Nathan; Williams, Grace; Mukora, Alice; Dalley, Rachel; Bodor, Agnes L.; Brittain, Derrick; Buchanan, JoAnn; Bumbarger, Daniel J.; Joyce, Emily; Kapner, Daniel; Kinn, Sam; Mahalingam, Gayathri; Seshamani, Sharmishtaa; Takeno, Marc; Torres, Russel; Yin, Wenjing; Nicovich, Philip R.; Bae, J. Alexander; Castro, Manuel A.; Dorkenwald, Sven; Halageri, Akhilesh; Jia, Zhen; Jordan, Chris; Kemnitz, Nico; Lee, Kisuk; Li, Kai; Lu, Ran; Macrina, Thomas; Mitchell, Eric; Mondal, Shanka Subhra; Mu, Shang; Nehoran, Barak; Popovych, Sergiy; Silversmith, William; Turner, Nicholas L.; Wong, William; Wu, Jingpeng; Yu, Szi-chieh; Berg, Jim; Jarsky, Tim; Lee, Brian; Seung, H. Sebastian; Zeng, Hongkui; Reid, R. Clay; Collman, Forrest; da Costa, Nuno Macarico
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Inhibitory specificity from a connectomic census of mouse visual cortex
errNATURE
IF48.5
err2025-04-09
err6
errOAAI
errSchneider-Mizell, Casey M.; Bodor, Agnes L.; Brittain, Derrick; Buchanan, Joann; Bumbarger, Daniel J.; Elabbady, Leila; Gamlin, Clare; Kapner, Daniel; Kinn, Sam; Mahalingam, Gayathri; Seshamani, Sharmishtaa; Suckow, Shelby; Takeno, Marc; Torres, Russel; Yin, Wenjing; Dorkenwald, Sven; Bae, J. Alexander; Castro, Manuel A.; Halageri, Akhilesh; Jia, Zhen; Jordan, Chris; Kemnitz, Nico; Lee, Kisuk; Li, Kai; Lu, Ran; Macrina, Thomas; Mitchell, Eric; Mondal, Shanka Subhra; Mu, Shang; Nehoran, Barak; Popovych, Sergiy; Silversmith, William; Turner, Nicholas L.; Wong, William; Wu, Jingpeng; Reimer, Jacob; Tolias, Andreas S.; Seung, H. Sebastian; Reid, R. Clay; Collman, Forrest; da Costa, Nuno Macarico
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Ultrastructural differences impact cilia shape and external exposure across cell classes in the visual cortex
err2024-06-01
err4
errOAAI
errOtt, Carolyn M.; Torres, Russel; Kuan, Tung-Sheng; Kuan, Aaron; Buchanan, Joann; Elabbady, Leila; Seshamani, Sharmishtaa; Bodor, Agnes L.; Collman, Forrest; Bock, Davi D.; Lee, Wei Chung; da Costa, Nuno Macarico; Lippincott-Schwartz, Jennifer
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Oligodendrocyte precursor cells ingest axons in the mouse neocortex
err2022-11-23
err65
errOAAI
errBuchanan, JoAnn; Elabbady, Leila; Collman, Forrest; Jorstad, Nikolas L.; Bakken, Trygve E.; Ott, Carolyn; Glatzer, Jenna; Bleckert, Adam A.; Bodor, Agnes L.; Brittain, Derrick; Bumbarger, Daniel J.; Mahalingam, Gayathri; Seshamani, Sharmishtaa; Schneider-Mizell, Casey; Takeno, Marc M.; Torres, Russel; Yin, Wenjing; Hodge, Rebecca D.; Castro, Manuel; Dorkenwald, Sven; Ih, Dodam; Jordan, Chris S.; Kemnitz, Nico; Lee, Kisuk; Lu, Ran; Macrina, Thomas; Mu, Shang; Popovych, Sergiy; Silversmith, William M.; Tartavull, Ignacio; Turner, Nicholas L.; Wilson, Alyssa M.; Wong, William; Wu, Jingpeng; Zlateski, Aleksandar; Zung, Jonathan; Lippincott-Schwartz, Jennifer; Lein, Ed S.; Seung, H. Sebastian; Bergles, Dwight E.; Reid, R. Clay; da Costa, Nuno Macarico
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Single-cell transcriptomic evidence for dense intracortical neuropeptide networks
err2019-11-11
err102
errOAAI
errSmith, Stephen J.; Sumbul, Uygar; Graybuck, Lucas T.; Collman, Forrest; Seshamani, Sharmishtaa; Gala, Rohan; Gliko, Olga; Elabbady, Leila; Miller, Jeremy A.; Bakken, Trygve E.; Rossier, Jean; Yao, Zizhen; Lein, Ed; Zeng, Hongkui; Tasic, Bosiljka; Hawrylycz, Michael
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A community-developed open-source computational ecosystem for big neuro data
err2018-10-30
err41
errOAAI
errVogelstein, Joshua T.; Perlman, Eric; Falk, Benjamin; Baden, Alex; Roncal, William Gray; Chandrashekhar, Vikram; Collman, Forrest; Seshamani, Sharmishtaa; Patsolic, Jesse L.; Lillaney, Kunal; Kazhdan, Michael; Hider, Robert, Jr.; Pryor, Derek; Matelsky, Jordan; Gion, Timothy; Manavalan, Priya; Wester, Brock; Chevillet, Mark; Trautman, Eric T.; Khairy, Khaled; Bridgeford, Eric; Kleissas, Dean M.; Tward, Daniel J.; Crow, Ailey K.; Hsueh, Brian; Wright, Matthew A.; Miller, Michael I.; Smith, Stephen J.; Vogelstein, R. Jacob; Deisseroth, Karl; Burns, Randal
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Label-free prediction of three-dimensional fluorescence images from transmitted-light microscopy
err2018-09-17
err356
errOAAI
errOunkomol, Chawin; Seshamani, Sharmishtaa; Maleckar, Mary M.; Collman, Forrest; Johnson, Gregory R.
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Detecting default mode networks in utero by integrated 4D fMRI reconstruction and analysis
err2016-10-06
err20
errOAAI
errSeshamani, Sharmishtaa; Blazejewska, Anna I.; Mckown, Susan; Caucutt, Jason; Dighe, Manjiri; Gatenby, Christopher; Studholme, Colin
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3D in utero quantification of T2*relaxation times in human fetal brain tissues for age optimized structural and functional MRI
err2016-10-03
err28
errOAAI
errBlazejewska, Anna I.; Seshamani, Sharmishtaa; McKown, Susan K.; Caucutt, Jason S.; Dighe, Manjiri; Gatenby, Christopher; Studholme, Colin
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A Method for handling intensity inhomogenieties in fMRI sequences of moving anatomy of the early developing brain
err2014-02-01
err22
errOAAI
errSeshamani, Sharmishtaa; Cheng, Xi; Fogtmann, Mads; Thomason, Moriah E.; Studholme, Colin
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A Unified Approach to Diffusion Direction Sensitive Slice Registration and 3-D DTI Reconstruction From Moving Fetal Brain Anatomy
err2014-02-01
err66
errOAAI
errFogtmann, Mads; Seshamani, Sharmishtaa; Kroenke, Christopher; Cheng, Xi; Chapman, Teresa; Wilm, Jakob; Rousseau, Francois; Studholme, Colin
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A Meta Method for Image Matching
err2011-08-01
err6
PREAI
errSeshamani, Sharmishtaa; Kumar, Rajesh; Mullin, Gerard; Dassopoulos, Themistocles; Hager, Gregory D.
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