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High-dimensional imaging using combinatorial channel multiplexing and deep learning Ben-Uri, Raz; Ben Shabat, Lior; Shainshein, Dana; Bar-Tal, Omer; Bussi, Yuval; Maimon, Noa; Haran, Tal Keidar; Milo, Idan; Goliand, Inna; Addadi, Yoseph; Salame, Tomer Meir; Rochwarger, Alexander; Schuerch, Christian M.; Bagon, Shai; Elhanani, Ofer; Keren, Leeat Share Save
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B cell infiltration and memory TOX+CD8+T cells in stage I-II non-small cell lung cancer (NSCLC) predict response to neoadjuvant pembrolizumab: A phase I study Bar, J.; Maimon, N.; Glantzspiegel, Y.; Kamer, I.; Zadok, O.; Ofek, E.; Daniel-Meshulam, I.; Urban, D.; Ackerstein, A.; Daher, S. N.; Sorotsky, H. Gantz; Onn, A.; Zeitlin, N.; Kremer, R. Y.; Redinsky, I.; Gat-Viks, I.; Keren, L. Share Save
Immune profiling and tracking of two-dimensional transition metal dichalcogenides in cells and tissues Gazzi, Arianna; Fusco, Laura; Orecchioni, Marco; Keshavan, Sandeep; Shin, Yuyoung; Grivel, Jean-Charles; Rinchai, Darawan; Ahmed, Eiman I.; Elhanani, Ofer; Furesi, Giulia; Rauner, Martina; Keren, Leeat; Ley, Klaus; Casiraghi, Cinzia; Bedognetti, Davide; Fadeel, Bengt; Delogu, Lucia Gemma Share Save
The total mass, number, and distribution of immune cells in the human body Sendera, Ron; Weiss, Yarden; Navon, Yoav; Milo, Idan; Azulay, Nofar; Keren, Leeat; Fuchs, Shai; Ben-Zvie, Danny; Noora, Elad; Milo, Ron Share Save
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Immune Profiling and Multiplexed Label-Free Detection of 2D MXenes by Mass Cytometry and High-Dimensional Imaging Fusco, Laura; Gazzi, Arianna; Shuck, Christopher E.; Orecchioni, Marco; Alberti, Dafne; D'Almeida, Senan Mickael; Rinchai, Darawan; Ahmed, Eiman; Elhanani, Ofer; Rauner, Martina; Zavan, Barbara; Grivel, Jean-Charles; Keren, Leeat; Pasqual, Giulia; Bedognetti, Davide; Ley, Klaus; Gogotsi, Yury; Delogu, Lucia Gemma Share Save
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The immunoregulatory landscape of human tuberculosis granulomas (vol 23, pg 318, 2022) McCaffrey, Erin F.; Donato, Michele; Keren, Leeat; Chen, Zhenghao; Delmastro, Alea; Fitzpatrick, Megan B.; Gupta, Sanjana; Greenwald, Noah F.; Baranski, Alex; Graf, William; Kumar, Rashmi; Bosse, Marc; Fullaway, Christine Camacho; Ramdial, Pratista K.; Forgo, Erna; Jojic, Vladimir; Van Valen, David; Mehra, Smriti; Khader, Shabaana A.; Bendall, Sean C.; van de Rijn, Matt; Kalman, Daniel; Kaushal, Deepak; Hunter, Robert L.; Banaei, Niaz; Steyn, Adrie J. C.; Khatri, Purvesh; Angelo, Michael Share Save
The immunoregulatory landscape of human tuberculosis granulomas McCaffrey, Erin F.; Donato, Michele; Keren, Leeat; Chen, Zhenghao; Delmastro, Alea; Fitzpatrick, Megan B.; Gupta, Sanjana; Greenwald, Noah F.; Baranski, Alex; Graf, William; Kumar, Rashmi; Bosse, Marc; Fullaway, Christine Camacho; Ramdial, Pratista K.; Forgo, Erna; Jojic, Vladimir; Van Valen, David; Mehra, Smriti; Khader, Shabaana A.; Bendall, Sean C.; van de Rijn, Matt; Kalman, Daniel; Kaushal, Deepak; Hunter, Robert L.; Banaei, Niaz; Steyn, Adrie J. C.; Khatri, Purvesh; Angelo, Michael Share Save
Whole-cell segmentation of tissue images with human-level performance using large-scale data annotation and deep learning Greenwald, Noah F.; Miller, Geneva; Moen, Erick; Kong, Alex; Kagel, Adam; Dougherty, Thomas; Fullaway, Christine Camacho; McIntosh, Brianna J.; Leow, Ke Xuan; Schwartz, Morgan Sarah; Pavelchek, Cole; Cui, Sunny; Camplisson, Isabella; Bar-Tal, Omer; Singh, Jaiveer; Fong, Mara; Chaudhry, Gautam; Abraham, Zion; Moseley, Jackson; Warshawsky, Shiri; Soon, Erin; Greenbaum, Shirley; Risom, Tyler; Hollmann, Travis; Bendall, Sean C.; Keren, Leeat; Graf, William; Angelo, Michael; Van Valen, David Share Save
Single cell biology-a Keystone Symposia report Cable, Jennifer; Elowitz, Michael B.; Domingos, Ana I.; Habib, Naomi; Itzkovitz, Shalev; Hamidzada, Homaira; Balzer, Michael S.; Yanai, Itai; Liberali, Prisca; Whited, Jessica; Streets, Aaron; Cai, Long; Stergachis, Andrew B.; Hong, Clarice Kit Yee; Keren, Leeat; Guilliams, Martin; Alon, Uri; Shalek, Alex K.; Hamel, Regan; Pfau, Sarah J.; Raj, Arjun; Quake, Stephen R.; Zhang, Nancy R.; Fan, Jean; Trapnell, Cole; Wang, Bo; Greenwald, Noah F.; Vento-Tormo, Roser; Santos, Silvia D. M.; Spencer, Sabrina L.; Garcia, Hernan G.; Arekatla, Geethika; Gaiti, Federico; Arbel-Goren, Rinat; Rulands, Steffen; Junker, Jan Philipp; Klein, Allon M.; Morris, Samantha A.; Murray, John I.; Galloway, Kate E.; Ratz, Michael; Romeike, Merrit Share Save
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Adjacent Cell Marker Lateral Spillover Compensation and Reinforcement for Multiplexed Images Bai, Yunhao; Zhu, Bokai; Rovira-Clave, Xavier; Chen, Han; Markovic, Maxim; Chan, Chi Ngai; Su, Tung-Hung; McIlwain, David R.; Estes, Jacob D.; Keren, Leeat; Nolan, Garry P.; Jiang, Sizun Share Save
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MIBI-TOF: A multiplexed imaging platform relates cellular phenotypes and tissue structure Keren, Leeat; Bosse, Marc; Thompson, Steve; Risom, Tyler; Vijayaragavan, Kausalia; McCaffrey, Erin; Marquez, Diana; Angoshtari, Roshan; Greenwald, Noah F.; Fienberg, Harris; Wang, Jennifer; Kambham, Neeraja; Kirkwood, David; Nolan, Garry; Montine, Thomas J.; Galli, Stephen J.; West, Robert; Bendall, Sean C.; Angelo, Michael Share Save
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