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Aaron Streets

University of California

29H-index
92Paper Count
7.6KCitation Count
Published Papers 33
Publication Date
Single-nucleus analysis of human white adipose tissue reveals adipocyte subsets with distinct metabolic profiles
err2026-08-05
err0
errOAAI
errVissarion Efthymiou; Adhideb Ghosh; Sean D. Kodani; Habib Muallem; Xavier Caubit; Waqar Ali; Lindsay S. Poulos; Henrique Camara; Anushka Gupta; Yasmine Belaidouni; A. Sina Booeshaghi; Shiyi Yang; Ruchir Rastogi; Farnaz Shamsi; Ashley Vernon; Laurent Fasano; Assaf Rudich; Aaron Streets; Yu-Hua Tseng; Mary Elizabeth Patti
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Mapping protein-DNA interactions with DiMeLo-seq
err2024-09-05
err0
PREAI
errMaslan, Annie; Altemose, Nicolas; Marcus, Jeremy; Mishra, Reet; Brennan, Lucy D.; Sundararajan, Kousik; Karpen, Gary; Straight, Aaron F.; Streets, Aaron
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Deep generative modeling of transcriptional dynamics for RNA velocity analysis in single cells
err2023-09-21
err14
errOAAI
errGayoso, Adam; Weiler, Philipp; Lotfollahi, Mohammad; Klein, Dominik; Hong, Justin; Streets, Aaron; Theis, Fabian J.; Yosef, Nir
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Single-cell multiomic analysis of thymocyte development reveals drivers of CD4+ T cell and CD8+ T cell lineage commitment
err2023-08-14
err12
errOAAI
errSteier, Zoe; Aylard, Dominik A.; McIntyre, Laura L.; Baldwin, Isabel; Kim, Esther Jeong Yoon; Lutes, Lydia K.; Ergen, Can; Huang, Tse-Shun; Robey, Ellen A.; Yosef, Nir; Streets, Aaron
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Mapping the transcriptional landscape of human white and brown adipogenesis using single-nuclei RNA-seq
err2023-08-01
err5
errOAAI
errGupta, Anushka; Efthymiou, Vissarion; Kodani, Sean D.; Shamsi, Farnaz; Patti, Mary Elizabeth; Tseng, Yu-Hua; Streets, Aaron
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Loss of TJP1 disrupts gastrulation patterning and increases differentiation toward the germ cell lineage in human pluripotent stem cells
err2023-08-01
err6
errOAAI
errVasic, Ivana; Libby, Ashley R. G.; Maslan, Annie; Bulger, Emily A.; Zalazar, David; Compagno, Martina Z. Krakora; Streets, Aaron; Tomoda, Kiichiro; Yamanaka, Shinya; Mcdevitt, Todd C.
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Towards an active droplet-based microfluidic platform for programmable fluid handling
err2023-01-01
err6
errOAAI
errCao, Xiaobao; Buryska, Tomas; Yang, Tianjin; Wang, Jing; Fischer, Peter; Streets, Aaron; Stavrakis, Stavros; deMello, Andrew
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Phototoxic effects of nonlinear optical microscopy on cell cycle, oxidative states, and gene expression
err2022-11-05
err9
errOAAI
errZhang, Xinyi; Dorlhiac, Gabriel; Landry, Markita P.; Streets, Aaron
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DiMeLo-seq: a long-read, single-molecule method for mapping protein-DNA interactions genome wide
err2022-04-08
err57
errOAAI
errAltemose, Nicolas; Maslan, Annie; Smith, Owen K.; Sundararajan, Kousik; Brown, Rachel R.; Mishra, Reet; Detweiler, Angela M.; Neff, Norma; Miga, Karen H.; Straight, Aaron F.; Streets, Aaron
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A Python library for probabilistic analysis of single-cell omics data
err2022-02-07
err208
errOAAI
errGayoso, Adam; Lopez, Romain; Xing, Galen; Boyeau, Pierre; Amiri, Valeh Valiollah Pour; Hong, Justin; Wu, Katherine; Jayasuriya, Michael; Mehlman, Edouard; Langevin, Maxime; Liu, Yining; Samaran, Jules; Misrachi, Gabriel; Nazaret, Achille; Clivio, Oscar; Xu, Chenling; Ashuach, Tal; Gabitto, Mariano; Lotfollahi, Mohammad; Svensson, Valentine; Beltrame, Eduardo da Veiga; Kleshchevnikov, Vitalii; Talavera-Lopez, Carlos; Pachter, Lior; Theis, Fabian J.; Streets, Aaron; Jordan, Michael I.; Regier, Jeffrey; Yosef, Nir
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Characterization of transcript enrichment and detection bias in single-nucleus RNA-seq for mapping of distinct human adipocyte lineages
err2022-01-18
err34
errOAAI
errGupta, Anushka; Shamsi, Farnaz; Altemose, Nicolas; Dorlhiac, Gabriel F.; Cypess, Aaron M.; White, Andrew P.; Yosef, Nir; Patti, Mary Elizabeth; Tseng, Yu-Hua; Streets, Aaron
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CXCR3 regulates stem and proliferative CD8+T cells during chronic infection by promoting interactions with DCs in splenic bridging channels
err2022-01-01
err20
errOAAI
errBangs, Derek J.; Tsitsiklis, Alexandra; Steier, Zoe; Chan, Shiao Wei; Kaminski, James; Streets, Aaron; Yosef, Nir; Robey, Ellen A.
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Single cell biology-a Keystone Symposia report
err2021-10-03
err3
errOAAI
errCable, Jennifer; Elowitz, Michael B.; Domingos, Ana I.; Habib, Naomi; Itzkovitz, Shalev; Hamidzada, Homaira; Balzer, Michael S.; Yanai, Itai; Liberali, Prisca; Whited, Jessica; Streets, Aaron; Cai, Long; Stergachis, Andrew B.; Hong, Clarice Kit Yee; Keren, Leeat; Guilliams, Martin; Alon, Uri; Shalek, Alex K.; Hamel, Regan; Pfau, Sarah J.; Raj, Arjun; Quake, Stephen R.; Zhang, Nancy R.; Fan, Jean; Trapnell, Cole; Wang, Bo; Greenwald, Noah F.; Vento-Tormo, Roser; Santos, Silvia D. M.; Spencer, Sabrina L.; Garcia, Hernan G.; Arekatla, Geethika; Gaiti, Federico; Arbel-Goren, Rinat; Rulands, Steffen; Junker, Jan Philipp; Klein, Allon M.; Morris, Samantha A.; Murray, John I.; Galloway, Kate E.; Ratz, Michael; Romeike, Merrit
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T cell self-reactivity during thymic development dictates the timing of positive selection
err2021-04-22
err16
errOAAI
errLutes, Lydia K.; Steier, Zoe; McIntyre, Laura L.; Pandey, Shraddha; Kaminski, James; Hoover, Ashley R.; Ariotti, Silvia; Streets, Aaron; Yosef, Nir; Robey, Ellen A.
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Joint probabilistic modeling of single-cell multi-omic data with totalVI
err2021-02-15
err223
errOAAI
errGayoso, Adam; Steier, Zoe; Lopez, Romain; Regier, Jeffrey; Nazor, Kristopher L.; Streets, Aaron; Yosef, Nir
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Paper-thin multilayer microfluidic devices with integrated valves
err2021-01-01
err4
errOAAI
errKim, Soohong; Dorlhiac, Gabriel; Chaves, Rodrigo Cotrim; Zalavadia, Mansi; Streets, Aaron
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μDamID: A Microfluidic Approach for Joint Imaging and Sequencing of Protein-DNA Interactions in Single Cells
err2020-10-01
err16
errOAAI
errAltemose, Nicolas; Maslan, Annie; Rios-Martinez, Carolina; Lai, Andre; White, Jonathan A.; Streets, Aaron
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μCB-seq: microfluidic cell barcoding and sequencing for high-resolution imaging and sequencing of single cells
err2020-01-01
err53
errOAAI
errChen, Tyler N.; Gupta, Anushka; Zalavadia, Mansi D.; Streets, Aaron
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High-throughput smFRET analysis of freely diffusing nucleic acid molecules and associated proteins
errMETHODS
IF4.3
err2019-10-01
err9
errOAAI
errSegal, Maya; Ingargiola, Antonino; Lerner, Eitan; Chung, SangYoon; White, Jonathan A.; Streets, Aaron; Weiss, S.; Michalet, X.
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Radial variation in biochemical composition of the bovine caudal intervertebral disc
err2019-09-02
err30
errOAAI
errBezci, Semih E.; Werbner, Benjamin; Zhou, Minhao; Malollari, Katerina G.; Dorlhiac, Gabriel; Carraro, Carlo; Streets, Aaron; O'Connell, Grace D.
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