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Amos Bairoch

swiss institute of bioinformatics

95H-index
245Paper Count
6.6WCitation Count
Published Papers 104
Publication Date
A large collection of bioinformatics question–query pairs over federated knowledge graphs: methodology and applications
err2025-05-16
err0
errOAAI
errJerven Bolleman; Vincent Emonet; Adrian Altenhoff; Amos Bairoch; Marie-Claude Blatter; Alan Bridge; Séverine Duvaud; Elisabeth Gasteiger; Dmitry Kuznetsov; Sébastien Moretti; Pierre-Andre Michel; Anne Morgat; Marco Pagni; Nicole Redaschi; Monique Zahn-Zabal; Tarcisio Mendes de Farias; Ana Claudia Sima
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Guidelines for managing and using the digital phenotypes of pluripotent stem cell lines
err2024-10-01
err2
errOAAI
errWells, Christine A.; Guhr, Anke; Bairoch, Amos; Chen, Ying; Hu, Mengqi; Loser, Peter; Ludwig, Tenneille E.; Mah, Nancy; Mueller, Sabine C.; Wulczyn, Andrea E. M. Seiler; Seltmann, Stefanie; Rossbach, Bella; Kurtz, Andreas
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The SIB Swiss Institute of Bioinformatics Semantic Web of data
err2023-10-25
err2
errOAAI
errAltenhoff, Adrian; Bairoch, Amos; Bansal, Parit; Baratin, Delphine; Bastian, Frederic; Bolleman, Jerven; Bridge, Alan; Burdet, Frederic; Crameri, Katrin; Dauvillier, Jerome; Dessimoz, Christophe; Gehant, Sebastien; Glover, Natasha; Gnodtke, Kristin; Hayes, Catherine; Ibberson, Mark; Kriventseva, Evgenia; Kuznetsov, Dmitry; Lisacek, Frederique; Mehl, Florence; de Farias, Tarcisio Mendes; Michel, Pierre-Andre; Moretti, Sebastien; Morgat, Anne; Osterle, Sabine; Pagni, Marco; Redaschi, Nicole; Robinson-Rechavi, Marc; Samarasinghe, Kasun; Sima, Ana-Claudia; Szklarczyk, Damian; Topalov, Orlin; Toure, Vasundra; Unni, Deepak; von Mering, Christian; Wollbrett, Julien; Zahn-Zabal, Monique; Zdobnov, Evgeny
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C11orf83, a Mitochondrial Cardiolipin-Binding Protein Involved in bc1 Complex Assembly and Supercomplex Stabilization
err2023-03-20
err64
errOAAI
errDesmurs, Marjorie; Foti, Michelangelo; Raemy, Etienne; Vaz, Frederic Maxime; Martinou, Jean-Claude; Bairoch, Amos; Lane, Lydie
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A high-stringency blueprint of the human proteome
err2020-10-16
err151
errOAAI
errAdhikari, Subash; Nice, Edouard C.; Deutsch, Eric W.; Lane, Lydie; Omenn, Gilbert S.; Pennington, Stephen R.; Paik, Young-Ki; Overall, Christopher M.; Corrales, Fernando J.; Cristea, Ileana M.; Van Eyk, Jennifer E.; Uhlen, Mathias; Lindskog, Cecilia; Chan, Daniel W.; Bairoch, Amos; Waddington, James C.; Justice, Joshua L.; LaBaer, Joshua; Rodriguez, Henry; He, Fuchu; Kostrzewa, Markus; Ping, Peipei; Gundry, Rebekah L.; Stewart, Peter; Srivastava, Sanjeeva; Srivastava, Sudhir; Nogueira, Fabio C. S.; Domont, Gilberto B.; Vandenbrouck, Yves; Lam, Maggie P. Y.; Wennersten, Sara; Vizcaino, Juan Antonio; Wilkins, Marc; Schwenk, Jochen M.; Lundberg, Emma; Bandeira, Nuno; Marko-Varga, Gyorgy; Weintraub, Susan T.; Pineau, Charles; Kusebauch, Ulrike; Moritz, Robert L.; Ahn, Seong Beom; Palmblad, Magnus; Snyder, Michael P.; Aebersold, Ruedi; Baker, Mark S.
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Brain Metastasis Cell Lines Panel: A Public Resource of Organotropic Cell Lines
err2020-10-15
err64
errOAAI
errValiente, Manuel; Van Swearingen, Amanda E. D.; Anders, Carey K.; Bairoch, Amos; Boire, Adrienne; Bos, Paula D.; Cittelly, Diana M.; Erez, Neta; Ferraro, Gino B.; Fukumura, Dai; Gril, Brunilde; Herlyn, Meenhard; Holmen, Sheri L.; Jain, Rakesh K.; Joyce, Johanna A.; Lorger, Mihaela; Massague, Joan; Neman, Josh; Sibson, Nicola R.; Steeg, Patricia S.; Thorsen, Frits; Young, Leonie S.; Vareslija, Damir; Vultur, Adina; Weis-Garcia, Frances; Winkler, Frank
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The neXtProt knowledgebase in 2020: data, tools and usability improvements
err2019-11-14
err141
errOAAI
errZahn-Zabal, Monique; Michel, Pierre-Andre; Gateau, Alain; Nikitin, Frederic; Schaeffer, Mathieu; Audot, Estelle; Gaudet, Pascale; Duek, Paula D.; Teixeira, Daniel; de Laval, Valentine Rech; Samarasinghe, Kasun; Bairoch, Amos; Lane, Lydie
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The ABCD database: a repository for chemically defined antibodies
err2019-08-14
err28
errOAAI
errLima, Wanessa C.; Gasteiger, Elisabeth; Marcatili, Paolo; Duek, Paula; Bairoch, Amos; Cosson, Pierre
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Cell Lines as Biological Models: Practical Steps for More Reliable Research
err2019-06-15
err16
errOAAI
errCapes-Davis, Amanda; Bairoch, Amos; Barrett, Tanya; Burnett, Edward C.; Dirks, Wilhelm G.; Hall, Erin M.; Healy, Lyn; Kniss, Douglas A.; Korch, Christopher; Liu, Yuqin; Neve, Richard M.; Nims, Raymond W.; Parodi, Barbara; Schweppe, Rebecca E.; Storts, Douglas R.; Tian, Fang
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Incidences of problematic cell lines are lower in papers that use RRIDs to identify cell lines
err2019-01-29
err30
errOAAI
errBabic, Zeljana; Capes-Davis, Amanda; Martone, Maryann E.; Bairoch, Amos; Ozyurt, I. Burak; Gillespie, Thomas H.; Bandrowski, Anita E.
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Exploring the Uncharacterized Human Proteome Using neXtProt
err2018-09-07
err29
PREAI
errDuek, Paula; Gateau, Alain; Bairoch, Amos; Lane, Lydie
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Large-Scale Reanalysis of Publicly Available HeLa Cell Proteomics Data in the Context of the Human Proteome Project
err2018-09-03
err19
PREAI
errRobin, Thibault; Bairoch, Amos; Mueller, Markus; Lisacek, Frederique; Lane, Lydie
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A new bioinformatics tool to help assess the significance of BRCA1 variants
err2018-07-11
err8
errOAAI
errCusin, Isabelle; Teixeira, Daniel; Zahn-Zabal, Monique; de Laval, Valentine Rech; Gleizes, Anne; Viassolo, Valeria; Chappuis, Pierre O.; Hutter, Pierre; Bairoch, Amos; Gaudet, Pascale
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A Standard Nomenclature for Referencing and Authentication of Pluripotent Stem Cells
err2018-01-01
err33
errOAAI
errKurtz, Andreas; Seltmann, Stefanie; Bairoch, Amos; Bittner, Marie-Sophie; Bruce, Kevin; Capes-Davis, Amanda; Clarke, Laura; Crook, Jeremy M.; Daheron, Laurence; Dewender, Johannes; Faulconbridge, Adam; Fujibuchi, Wataru; Gutteridge, Alexander; Hei, Derek J.; Kim, Yong-Ou; Kim, Jung-Hyun; Kolb-Kokocinski, Anja; Lekschas, Fritz; Lomax, Geoffrey P.; Loring, Jeanne F.; Ludwig, Tenneille; Mah, Nancy; Matsui, Tohru; Mueller, Robert; Parkinson, Helen; Sheldon, Michael; Smith, Kelly; Stachelscheid, Harald; Stacey, Glyn; Streeter, Ian; Veiga, Anna; Xu, Ren-He
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Triage by ranking to support the curation of protein interactions
err2017-06-11
err6
errOAAI
errMottin, Luc; Pasche, Emilie; Gobeill, Julien; de laval, Valentine Rech; Gleizes, Anne; Michel, Pierre-Andre; Bairoch, Amos; Gaudet, Pascale; Ruch, Patrick
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Annotation of functional impact of voltage-gated sodium channelmutations
err2017-02-28
err10
errOAAI
errHinard, Valerie; Britan, Aurore; Schaeffer, Mathieu; Zahn-Zabal, Monique; Thomet, Urs; Rougier, Jean-Sebastien; Bairoch, Amos; Abriel, Hugues; Gaudet, Pascale
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The neXtProt knowledgebase on human proteins: 2017 update
err2016-11-29
err145
errOAAI
errGaudet, Pascale; Michel, Pierre-Andre; Zahn-Zabal, Monique; Britan, Aurore; Cusin, Isabelle; Domagalski, Marcin; Duek, Paula D.; Gateau, Alain; Gleizes, Anne; Hinard, Valerie; de Laval, Valentine Rech; Lin, JinJin; Nikitin, Frederic; Schaeffer, Mathieu; Teixeira, Daniel; Lane, Lydie; Bairoch, Amos
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Missing Protein Landscape of Human Chromosomes 2 and 14: Progress and Current Status
err2016-08-17
err13
errOAAI
errDuek, Paula; Bairoch, Amos; Gateau, Alain; Vandenbrouck, Yves; Lane, Lydie
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