Not logged in Pathogenic Roles for RNASET2 in Clear Cell Renal Cell Carcinoma Peak, Taylor; Tian, Yijun; Patel, Aman; Shaw, Tim; Obermayer, Alyssa; Laborde, Jose; Kim, Youngchul; Johnson, Joseph; Stewart, Paul; Fang, Bin; Teer, Jamie K.; Koomen, John; Berglund, Anders; Marchion, Doug; Francis, Natasha; Echevarria, Paola Ramos; Dhillon, Jasreman; Clark, Noel; Chang, Andrew; Sexton, Wade; Zemp, Logan; Chahoud, Jad; Wang, Liang; Manley, Brandon Share Save
St. Jude Cloud: A Pediatric Cancer Genomic Data-Sharing Ecosystem McLeod, Clay; Gout, Alexander M.; Zhou, Xin; Thrasher, Andrew; Rahbarinia, Delaram; Brady, Samuel W.; Macias, Michael; Birch, Kirby; Finkelstein, David; Sunny, Jobin; Mudunuri, Rahul; Orr, Brent A.; Treadway, Madison; Davidson, Bob; Ard, Tracy K.; Chiao, Arthur; Swistak, Andrew; Wiggins, Stephanie; Foy, Scott; Wang, Jian; Sioson, Edgar; Wang, Shuoguo; Michael, J. Robert; Liu, Yu; Ma, Xiaotu; Patel, Aman; Edmonson, Michael N.; Wilkinson, Mark R.; Frantz, Andrew M.; Chang, Ti-Cheng; Tian, Liqing; Lei, Shaohua; Islam, S. M. Ashiqul; Meyer, Christopher; Thangaraj, Naina; Tater, Pamella; Kandali, Vijay; Ma, Singer; Tuan Nguyen; Serang, Omar; McGuire, Irina; Robison, Nedra; Gentry, Darrell; Tang, Xing; Palmer, Lance E.; Wu, Gang; Suh, Ed; Tanner, Leigh; McMurry, James; Lear, Matthew; Pappo, Alberto S.; Wang, Zhaoming; Wilson, Carmen L.; Cheng, Yong; Meshinchi, Soheil; Alexandrov, Ludmil B.; Weiss, Mitchell J.; Armstrong, Gregory T.; Robison, Leslie L.; Yasui, Yutaka; Nichols, Kim E.; Ellison, David W.; Bangur, Chaitanya; Mullighan, Charles G.; Baker, Suzanne J.; Dyer, Michael A.; Miller, Geralyn; Newman, Scott; Rusch, Michael; Daly, Richard; Perry, Keith; Downing, James R.; Zhang, Jinghui Share Save
HPV-driven cancers show distinct methylation signatures in cell-free DNA (cfDNA) Calef, Robert; Venn, Oliver; Maher, M. Cyrus; Beausang, John F.; Hubbell, Earl; Patel, Aman; Fields, Alexander P.; Bredno, Joerg; Jamshidi, Arash; Aravanis, Alexander M. Share Save
Pediatric Cancer Variant Pathogenicity Information Exchange (PeCanPIE): a cloud-based platform for curating and classifying germline variants Edmonson, Michael N.; Patel, Aman N.; Hedges, Dale J.; Wang, Zhaoming; Rampersaud, Evadnie; Kesserwan, Chimene A.; Zhou, Xin; Liu, Yanling; Newman, Scott; Rusch, Michael C.; McLeod, Clay L.; Wilkinson, Mark R.; Rice, Stephen, V; Soussi, Thierry; Taylor, J. Paul; Benatar, Michael; Becksfort, Jared B.; Nichols, Kim E.; Robison, Leslie L.; Downing, James R.; Zhang, Jinghui Share Save
Increased prevalence of germline monoallelic RECQL4 mutations in children with cancer Maciaszek, Jamie L.; Wu, Gang; Hamilton, Kayla; McGee, Rose B.; Wang, Zhaoming; Nuccio, Regina; Hines-Dowell, Stacy; Harrison, Lynn; Gerhardt, Elsie L.; Ouma, Annastasia; Newman, Scott; Patel, Aman; Nakitandwe, Joy; Azzato, Elizabeth; Pappo, Alberto S.; Shurtleff, Sheila A.; Ellison, David W.; Downing, James R.; Hudson, Melissa M.; Robison, Leslie L.; Santana, Victor; Zhang, Jinghui; Nichols, Kim E.; Kesserwan, Chimene A. Share Save
Clinical cancer genomic profiling by three-platform sequencing of whole genome, whole exome and transcriptome Rusch, Michael; Nakitandwe, Joy; Shurtleff, Sheila; Newman, Scott; Zhang, Zhaojie; Edmonson, Michael N.; Parker, Matthew; Jiao, Yuannian; Ma, Xiaotu; Liu, Yanling; Gu, Jiali; Walsh, Michael F.; Becksfort, Jared; Thrasher, Andrew; Li, Yongjin; McMurry, James; Hedlund, Erin; Patel, Aman; Easton, John; Yergeau, Donald; Vadodaria, Bhavin; Tatevossian, Ruth G.; Raimondi, Susana; Hedges, Dale; Chen, Xiang; Hagiwara, Kohei; McGee, Rose; Robinson, Giles W.; Klco, Jeffery M.; Gruber, Tanja A.; Ellison, David W.; Downing, James R.; Zhang, Jinghui Share Save
Access, visualize and analyze 5,000 whole-genomes from pediatric cancer patients on St. Jude Cloud Newman, Scott; Zhou, Xin; McLeod, Clay; Rusch, Michael; Wu, Gang; Sioson, Edgar; Wang, Shuoguo; Michael, J. Robert; Patel, Aman; Edmonson, Michael N.; Frantz, Andrew; Chang, Ti-Cheng; Li, Yongjin; Davidson, Robert I.; Ma, Singer; McGuire, Irina; Robison, Nedra; Tang, Xing; Palmer, Lance; Suh, Ed; Tanner, Leigh; McMurry, James; Perry, Keith; Wang, Zhaoming; Wilson, Carmen; Cheng, Yong; Weiss, Mitch; Robison, Leslie L.; Yasui, Yutaka; Nichols, Kim E.; Ellison, David W.; Downing, James R.; Zhang, Jinghui Share Save
Monogenic and polygenic associations with subsequent breast cancer risk in survivors of childhood cancer: The St. Jude Lifetime Cohort Study (SJLIFE) Wang, Zhaoming; Wilson, Carmen L.; Liu, Qi; Easton, John; Mulder, Heather L.; Rusch, Michael; Edmonson, Michael; Levy, Shawn; Patel, Aman; Shao, Ying; Chang, Ti-Cheng; Rice, Stephen V.; Sapkota, Yadav; Brooke, Russell J.; Moon, Wonjong; Rampersaud, Evadnie; Ma, Xiaotu; Pepper, Cynthia; Zhou, Xin; Chen, Xiang; Chen, Wenan; Jones, Angela; Boone, Braden; Ehrhardt, Matthew J.; Howell, Rebecca M.; Phillips, Nicholas; Lewis, Courtney; Kesserwan, Chimene A.; Wu, Gang; Nichols, Kim E.; Downing, James R.; Hudson, Melissa M.; Zhang, Jinghui; Yasui, Yutaka; Robison, Leslie L. Share Save
Aspirin abrogates impairment of mammary gland differentiation induced by early in life second-hand smoke in mice Santucci-Pereira, Julia; Pogash, Thomas J.; Patel, Aman; Hundal, Navroop; Barton, Maria; Camoirano, Anna; Micale, Rosanna T.; La Maestra, Sebastiano; Balansky, Roumen; De Flora, Silvio; Russo, Jose Share Save
Germline mutations in cancer predisposition genes and risk for subsequent neoplasms among long-term survivors of childhood cancer in the St. Jude Lifetime Cohort Wang, Zhaoming; Wilson, Carmen L.; Easton, John; Hedges, Dale; Liu, Qi; Wu, Gang; Rusch, Michael; Edmonson, Michael; Levy, Shawn; Lanctot, Jennifer Q.; Caron, Eric; Shelton, Kyla; Currie, Kelsey; Lear, Matthew; Mulder, Heather L.; Yergeau, Donald; Rosencrance, Celeste; Vadodaria, Bhavin; Sapkota, Yadav; Brooke, Russell J.; Moon, Wonjong; Rampersaud, Evadnie; Ma, Xiaotu; Wang, Shuoguo; Chang, Ti-Cheng; Rice, Stephen; Thrasher, Andrew; Patel, Aman; Pepper, Cynthia; Zhou, Xin; Chen, Xiang; Chen, Wenan; Jones, Angela; Boone, Braden; Srivastava, Deo Kumar; Kesserwan, Chimene A.; Nichols, Kim E.; Downing, James R.; Hudson, Melissa M.; Yasui, Yutaka; Robison, Leslie L.; Zhang, Jinghui Share Save
Exploring genomic alterations in pediatric cancer using ProteinPaint Zhou, Xin; Edmonson, Michael N.; Wilkinson, Mark R.; Patel, Aman; Wu, Gang; Liu, Yu; Li, Yongjin; Zhang, Zhaojie; Rusch, Michael; Parker, Matthew; Becksfort, Jared; Downing, James R.; Zhang, Jinghui Share Save
Molecular diagnosis for pediatric cancer through integrative analysis of whole-genome, whole-exome and transcriptome sequencing Zhang, Jinghui; Rusch, Michael; Nakitandwe, Joy; Zhang, Zhaojie; Edmonson, Michael N.; Parker, Matthew; Ma, Xiaotu; Becksfort, Jared; Thrasher, Andrew; Gu, Jiali; Li, Yongjin; Hedlund, Erin; Patel, Aman; Easton, John; Yergeau, Donald; Vadodaria, Bhavin; Chen, Xiang; Gruber, Tanja A.; McGee, Rose; Ellison, David; Shurtleff, Sheila; Downing, James R. Share Save
Exploring genomic alteration in pediatric cancer using ProteinPaint Zhou, Xin; Edmonson, Michael N.; Wilkinson, Mark R.; Patel, Aman; Wu, Gang; Liu, Yu; Li, Yongjin; Zhang, Zhaojie; Rusch, Michael C.; Parker, Matthew; Becksfort, Jared; Downing, James R.; Zhang, Jinghui Share Save
Germline Mutations in Predisposition Genes in Pediatric Cancer Zhang, Jinghui; Walsh, Michael F.; Wu, Gang; Edmonson, Michael N.; Gruber, Tanja A.; Easton, John; Hedges, Dale; Ma, Xiaotu; Zhou, Xin; Yergeau, Donald A.; Wilkinson, Mark R.; Vadodaria, Bhavin; Chen, Xiang; McGee, Rose B.; Hines-Dowell, Stacy; Nuccio, Regina; Quinn, Emily; Shurtleff, Sheila A.; Rusch, Michael; Patel, Aman; Becksfort, Jared B.; Wang, Shuoguo; Weaver, Meaghann S.; Ding, Li; Mardis, Elaine R.; Wilson, Richard K.; Gajjar, Amar; Ellison, David W.; Pappo, Alberto S.; Pui, Ching-Hon; Nichols, Kim E.; Downing, James R. Share Save
CONSERTING: integrating copy-number analysis with structural-variation detection Chen, Xiang; Gupta, Pankaj; Wang, Jianmin; Nakitandwe, Joy; Roberts, Kathryn; Dalton, James D.; Parker, Matthew; Patel, Samir; Holmfeldt, Linda; Payne, Debbie; Easton, John; Ma, Jing; Rusch, Michael; Wu, Gang; Patel, Aman; Baker, Suzanne J.; Dyer, Michael A.; Shurtleff, Sheila; Espy, Stephen; Pounds, Stanley; Downing, James R.; Ellison, David W.; Mullighan, Charles G.; Zhang, Jinghui Share Save
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