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D
David I. Heiman
Broad Institute of MIT and Harvard
97H-index
223Paper Count
10.8WCitation Count
Published Papers 17
Publication Date
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Integrative analysis of lung adenocarcinoma across diverse ethnicities and exposures.png)
Cancer Cell.png)
2025-07-31
0
OAAI
Shankha Satpathy; Natalie M. Clark; Yi-Ju Chen; Noshad Hosseini; Ya-Hsuan Chang; Yi Hsiao; Jonathan T. Lei; Francesca Petralia; Jin-Shing Chen; Yifat Geffen; David I. Heiman; Indranil Paul; Hanbyul Cho; Michelle Hollenberg; Giacomo B. Marino; Kuen-Tyng Lin; Rahul Mannan; C. Jackson White; Joe Allen; Shayan C. Avanessian; M. Harry Kane; Ashley Wolfe; Miloni Kinarivala; Wenke Liu; Shankara Anand; Mong-Wei Lin; Moe Haines; Erik J. Bergstrom; Grant Hussey; Ginny Xiaohe Li; Deepak C. Mani; Hao Fang; Eric J. Jaehnig; Hasmik Keshishian; Brecca Miller; Kang-Yi Su; Yi-Jing Hsiao; Hsao-Hsun Hsu; Min-Shu Hsieh; Kuo-Hsuan Hsu; Alexi Monovoukas; Simone Gohsman; John R. Thorup; Yamei Deng; Yo Akiyama; Eden Deng; Eric Sheng-Wen Chen; Azra Krek; Rodrigo Espinoza; Weiping Ma; Daniel Charytonowicz; Robert Sebra; Jyun-Hong Lin; Yan-Si Chen; Yin-Chen Hsu; Ze-Shiang Lin; Kun-Chieh Chen; Chang-Wei Yeh; Yu-Tai Wang; Alexander J. Lazar; Mehdi Mesri; Eunkyung An; Xu Zhang; Karl R. Clauser; David Fenyö; Arul M. Chinnaiyan; Bing Zhang; Li Ding; Kelly Ruggles; Chelsea Newton; Hui Zhang; Pei Wang; Galen Hostetter; Gilbert S. Omenn; Chandan Kumar-Sinha; Mathangi Thiagarajan; Ramaswamy Govindan; Paul Paik; Abhijit Parolia; Qing K. Li; Avi Ma’ayan; Gad A. Getz; Saravana M. Dhanasekaran; Ana I. Robles; Gee-Chen Chang; Pan-Chyr Yang; Sung-Liang Yu; Hsuan-Yu Chen; Alexey I. Nesvizhskii; Steven A. Carr; D.R. Mani; Marcin P. Cieslik; Yu-Ju Chen; Michael A. Gillette
Cancer CellIF44.5
2025-07-310OAAIShankha Satpathy; Natalie M. Clark; Yi-Ju Chen; Noshad Hosseini; Ya-Hsuan Chang; Yi Hsiao; Jonathan T. Lei; Francesca Petralia; Jin-Shing Chen; Yifat Geffen; David I. Heiman; Indranil Paul; Hanbyul Cho; Michelle Hollenberg; Giacomo B. Marino; Kuen-Tyng Lin; Rahul Mannan; C. Jackson White; Joe Allen; Shayan C. Avanessian; M. Harry Kane; Ashley Wolfe; Miloni Kinarivala; Wenke Liu; Shankara Anand; Mong-Wei Lin; Moe Haines; Erik J. Bergstrom; Grant Hussey; Ginny Xiaohe Li; Deepak C. Mani; Hao Fang; Eric J. Jaehnig; Hasmik Keshishian; Brecca Miller; Kang-Yi Su; Yi-Jing Hsiao; Hsao-Hsun Hsu; Min-Shu Hsieh; Kuo-Hsuan Hsu; Alexi Monovoukas; Simone Gohsman; John R. Thorup; Yamei Deng; Yo Akiyama; Eden Deng; Eric Sheng-Wen Chen; Azra Krek; Rodrigo Espinoza; Weiping Ma; Daniel Charytonowicz; Robert Sebra; Jyun-Hong Lin; Yan-Si Chen; Yin-Chen Hsu; Ze-Shiang Lin; Kun-Chieh Chen; Chang-Wei Yeh; Yu-Tai Wang; Alexander J. Lazar; Mehdi Mesri; Eunkyung An; Xu Zhang; Karl R. Clauser; David Fenyö; Arul M. Chinnaiyan; Bing Zhang; Li Ding; Kelly Ruggles; Chelsea Newton; Hui Zhang; Pei Wang; Galen Hostetter; Gilbert S. Omenn; Chandan Kumar-Sinha; Mathangi Thiagarajan; Ramaswamy Govindan; Paul Paik; Abhijit Parolia; Qing K. Li; Avi Ma’ayan; Gad A. Getz; Saravana M. Dhanasekaran; Ana I. Robles; Gee-Chen Chang; Pan-Chyr Yang; Sung-Liang Yu; Hsuan-Yu Chen; Alexey I. Nesvizhskii; Steven A. Carr; D.R. Mani; Marcin P. Cieslik; Yu-Ju Chen; Michael A. Gillette.png){kind=icon}
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SaveHigh-Resolution Profiling of Lung Adenocarcinoma Identifies Expression Subtypes with Specific Biomarkers and Clinically Relevant VulnerabilitiesCANCER RESEARCH2022-08-3015
OAAIRoh, Whijae; Geffen, Yifat; Cha, Hongui; Miller, Mendy; Anand, Shankara; Kim, Jaegil; Heiman, David, I; Gainor, Justin F.; Laird, Peter W.; Cherniack, Andrew D.; Ock, Chan-Young; Lee, Se-Hoon; Getz, Gad
CANCER RESEARCHIF16.6
2022-08-3015OAAIRoh, Whijae; Geffen, Yifat; Cha, Hongui; Miller, Mendy; Anand, Shankara; Kim, Jaegil; Heiman, David, I; Gainor, Justin F.; Laird, Peter W.; Cherniack, Andrew D.; Ock, Chan-Young; Lee, Se-Hoon; Getz, GadShareSavePANOPLY: a cloud-based platform for automated and reproducible proteogenomic data analysisNATURE METHODS2021-05-2612OAAIMani, D. R.; Maynard, Myranda; Kothadia, Ramani; Krug, Karsten; Christianson, Karen E.; Heiman, David; Clauser, Karl R.; Birger, Chet; Getz, Gad; Carr, Steven A.
NATURE METHODSIF32.1
2021-05-2612OAAIMani, D. R.; Maynard, Myranda; Kothadia, Ramani; Krug, Karsten; Christianson, Karen E.; Heiman, David; Clauser, Karl R.; Birger, Chet; Getz, Gad; Carr, Steven A.ShareSaveBefore and After: Comparison of Legacy and Harmonized TCGA Genomic Data Commons' DataCELL SYSTEMS2019-07-01107OAAIGao, Galen F.; Parker, Joel S.; Reynolds, Sheila M.; Silva, Tiago C.; Wang, Liang-Bo; Zhou, Wanding; Akbani, Rehan; Bailey, Matthew; Balu, Saianand; Berman, Benjamin P.; Brooks, Denise; Chen, Hu; Cherniack, Andrew D.; Demchok, John A.; Ding, Li; Felau, Ina; Gaheen, Sharon; Gerhard, Daniela S.; Heiman, David, I; Hernandez, Kyle M.; Hoadley, Katherine A.; Jayasinghe, Reyka; Kemal, Anab; Knijnenburg, Theo A.; Laird, Peter W.; Mensah, Michael K. A.; Mungall, Andrew J.; Robertson, A. Gordon; Shen, Hui; Tarnuzzer, Roy; Wang, Zhining; Wyczalkowski, Matthew; Yang, Liming; Zenklusen, Jean C.; Zhang, Zhenyu; Liang, Han; Noble, Michael S.
CELL SYSTEMSIF7.7
2019-07-01107OAAIGao, Galen F.; Parker, Joel S.; Reynolds, Sheila M.; Silva, Tiago C.; Wang, Liang-Bo; Zhou, Wanding; Akbani, Rehan; Bailey, Matthew; Balu, Saianand; Berman, Benjamin P.; Brooks, Denise; Chen, Hu; Cherniack, Andrew D.; Demchok, John A.; Ding, Li; Felau, Ina; Gaheen, Sharon; Gerhard, Daniela S.; Heiman, David, I; Hernandez, Kyle M.; Hoadley, Katherine A.; Jayasinghe, Reyka; Kemal, Anab; Knijnenburg, Theo A.; Laird, Peter W.; Mensah, Michael K. A.; Mungall, Andrew J.; Robertson, A. Gordon; Shen, Hui; Tarnuzzer, Roy; Wang, Zhining; Wyczalkowski, Matthew; Yang, Liming; Zenklusen, Jean C.; Zhang, Zhenyu; Liang, Han; Noble, Michael S.ShareSaveIntegrative Molecular Characterization of Malignant Pleural MesotheliomaCANCER DISCOVERY2018-12-03438OAAIHmeljaki, Jutija; Sanchez-Vega, Francisco; Hoadley, Katherine A.; Shih, Juliann; Stewart, Chip; Heiman, David; Tarpeyg, Patrick; Danitova, Ludmila; Drill, Esther; Gibb, Ewan A.; Bowlby, Reanne; Kanchil, Rupa; Osmanbeyoglull, Hatice U.; Sekido, Yoshitaka; Takeshita, Jumpei; Newton, Yulia; Graim, Kiley; Gupta, Manaswi; Gaylg, Cart M.; Diaol, Lixia; Gibbs, David L.; Thorsson, Vesteinn; Lype, Lisa; Kanthetir, Havish; Severson, David T.; Ravegnini, Gloria; Desrneules, Patrice; Jungbluth, Achim A.; Travis, William D.; Dacic, Sanja; Chirieac, Lucian R.; Galateau-Salle, Francoise; Fujimoto, Junya; Husain, Aliya N.; Silveira, Henrique C.; Rusch, Valerie W.; Rintoul, Robert C.; Pass, Harvey; Kindler, Heciy; Zauderer, Marjorie G.; Kwiatkowski, David J.; Bueno, Raphael; Tsaols, Anne S.; Creaney, Jenette; Lichtenberg, Tara; Leraas, Kristen; Bowen, Jay; Felau, Ina; Zenklusen, Jean Claude; Akbanil, Rehan; Cherniack, Andrew D.; Byers, Lauren A.; Noble, Michael S.; Fletcher, Jonathan A.; Robertsong, A. Gordon; Shen, Rongtai; Aburatani, Hiroyuki; Robinson, Bruce W.; Campbells, Peter; Ladanyi, Marc
CANCER DISCOVERYIF33.3
2018-12-03438OAAIHmeljaki, Jutija; Sanchez-Vega, Francisco; Hoadley, Katherine A.; Shih, Juliann; Stewart, Chip; Heiman, David; Tarpeyg, Patrick; Danitova, Ludmila; Drill, Esther; Gibb, Ewan A.; Bowlby, Reanne; Kanchil, Rupa; Osmanbeyoglull, Hatice U.; Sekido, Yoshitaka; Takeshita, Jumpei; Newton, Yulia; Graim, Kiley; Gupta, Manaswi; Gaylg, Cart M.; Diaol, Lixia; Gibbs, David L.; Thorsson, Vesteinn; Lype, Lisa; Kanthetir, Havish; Severson, David T.; Ravegnini, Gloria; Desrneules, Patrice; Jungbluth, Achim A.; Travis, William D.; Dacic, Sanja; Chirieac, Lucian R.; Galateau-Salle, Francoise; Fujimoto, Junya; Husain, Aliya N.; Silveira, Henrique C.; Rusch, Valerie W.; Rintoul, Robert C.; Pass, Harvey; Kindler, Heciy; Zauderer, Marjorie G.; Kwiatkowski, David J.; Bueno, Raphael; Tsaols, Anne S.; Creaney, Jenette; Lichtenberg, Tara; Leraas, Kristen; Bowen, Jay; Felau, Ina; Zenklusen, Jean Claude; Akbanil, Rehan; Cherniack, Andrew D.; Byers, Lauren A.; Noble, Michael S.; Fletcher, Jonathan A.; Robertsong, A. Gordon; Shen, Rongtai; Aburatani, Hiroyuki; Robinson, Bruce W.; Campbells, Peter; Ladanyi, MarcShareSaveIntegrated Molecular Characterization of Testicular Germ Cell TumorsCELL REPORTS2018-06-01316OAAIShen, Hui; Shih, Juliann; Hollern, Daniel P.; Wang, Linghua; Bowlby, Reanne; Tickoo, Satish K.; Thorsson, Vesteinn; Mungall, Andrew J.; Newton, Yulia; Hegde, Apurva M.; Armenia, Joshua; Sanchez-Vega, Francisco; Pluta, John; Pyle, Louise C.; Mehra, Rohit; Reuter, Victor E.; Godoy, Guilherme; Jones, Jeffrey; Shelley, Carl S.; Feldman, Darren R.; Vidal, Daniel O.; Lesse, Davor; Kulis, Tomislav; Carcano, Flavio M.; Leraas, Kristen M.; Lichtenberg, Tara M.; Brooks, Denise; Cherniack, Andrew D.; Cho, Juok; Heiman, David, I; Kasaian, Katayoon; Liu, Minwei; Noble, Michael S.; Xi, Liu; Zhang, Hailei; Zhou, Wanding; ZenKlusen, Jean C.; Hutter, Carolyn M.; Felau, Ina; Zhang, Jiashan; Schultz, Nikolaus; Getz, Gad; Meyerson, Matthew; Stuart, Joshua M.; Akbani, Rehan; Wheeler, David A.; Laird, Peter W.; Nathanson, Katherine L.; Cortessis, Victoria K.; Hoadley, Katherine A.
CELL REPORTSIF6.9
2018-06-01316OAAIShen, Hui; Shih, Juliann; Hollern, Daniel P.; Wang, Linghua; Bowlby, Reanne; Tickoo, Satish K.; Thorsson, Vesteinn; Mungall, Andrew J.; Newton, Yulia; Hegde, Apurva M.; Armenia, Joshua; Sanchez-Vega, Francisco; Pluta, John; Pyle, Louise C.; Mehra, Rohit; Reuter, Victor E.; Godoy, Guilherme; Jones, Jeffrey; Shelley, Carl S.; Feldman, Darren R.; Vidal, Daniel O.; Lesse, Davor; Kulis, Tomislav; Carcano, Flavio M.; Leraas, Kristen M.; Lichtenberg, Tara M.; Brooks, Denise; Cherniack, Andrew D.; Cho, Juok; Heiman, David, I; Kasaian, Katayoon; Liu, Minwei; Noble, Michael S.; Xi, Liu; Zhang, Hailei; Zhou, Wanding; ZenKlusen, Jean C.; Hutter, Carolyn M.; Felau, Ina; Zhang, Jiashan; Schultz, Nikolaus; Getz, Gad; Meyerson, Matthew; Stuart, Joshua M.; Akbani, Rehan; Wheeler, David A.; Laird, Peter W.; Nathanson, Katherine L.; Cortessis, Victoria K.; Hoadley, Katherine A.ShareSaveA comprehensive genomic history of extinct and living elephants2018-02-26129OAAIPalkopoulou, Eleftheria; Lipson, Mark; Mallick, Swapan; Nielsen, Svend; Rohland, Nadin; Baleka, Sina; Karpinski, Emil; Ivancevici, Atma M.; Thu-Hien To; Kortschak, Daniel; Raison, Joy M.; Qu, Zhipeng; Chin, Tat-Jun; Alt, Kurt W.; Claesson, Stefan; Dalen, Love; MacPhee, Ross D. E.; Meller, Harald; Rocar, Alfred L.; Ryder, Oliver A.; Heiman, David; Young, Sarah; Breen, Matthew; Williams, Christina; Aken, Bronwen L.; Ruffier, Magali; Karlsson, Elinor; Johnson, Jeremy; Di Palma, Federica; Alfoldi, Jessica; Adelsoni, David L.; Mailund, Thomas; Munch, Kasper; Lindblad-Toh, Kerstin; Hofreiter, Michael; Poinar, Hendrik; Reich, David
2018-02-26129OAAIPalkopoulou, Eleftheria; Lipson, Mark; Mallick, Swapan; Nielsen, Svend; Rohland, Nadin; Baleka, Sina; Karpinski, Emil; Ivancevici, Atma M.; Thu-Hien To; Kortschak, Daniel; Raison, Joy M.; Qu, Zhipeng; Chin, Tat-Jun; Alt, Kurt W.; Claesson, Stefan; Dalen, Love; MacPhee, Ross D. E.; Meller, Harald; Rocar, Alfred L.; Ryder, Oliver A.; Heiman, David; Young, Sarah; Breen, Matthew; Williams, Christina; Aken, Bronwen L.; Ruffier, Magali; Karlsson, Elinor; Johnson, Jeremy; Di Palma, Federica; Alfoldi, Jessica; Adelsoni, David L.; Mailund, Thomas; Munch, Kasper; Lindblad-Toh, Kerstin; Hofreiter, Michael; Poinar, Hendrik; Reich, DavidShareSaveComprehensive, Integrative Genomic Analysis of Diffuse Lower-Grade Gliomas2015-06-252.4KOAAIBrat, Daniel J.; Verhaak, Roel G. W.; Al-dape, Kenneth D.; Yung, W. K. Alfred; Salama, Sofie R.; Cooper, Lee A. D.; Rheinbay, Esther; Miller, C. Ryan; Vitucci, Mark; Morozova, Olena; Robertson, A. Gordon; Noushmehr, Houtan; Laird, Peter W.; Cherniack, Andrew D.; Akbani, Rehan; Huse, Jason T.; Ciriello, Giovanni; Poisson, Laila M.; Barnholtz-Sloan, Jill S.; Berger, Mitchel S.; Brennan, Cameron; Colen, Rivka R.; Colman, Howard; Flanders, Adam E.; Giannini, Caterina; Grifford, Mia; Iavarone, Antonio; Jain, Rajan; Joseph, Isaac; Kim, Jaegil; Kasaian, Katayoon; Mikkelsen, Tom; Murray, Bradley A.; O'Neill, Brian Patrick; Pachter, Lior; Parsons, Donald W.; Sougnez, Carrie; Sulman, Erik P.; Vandenberg, Scott R.; Van Meir, Erwin G.; von Deimling, Andreas; Zhang, Hailei; Crain, Daniel; Lau, Kevin; Mallery, David; Morris, Scott; Paulauskis, Joseph; Penny, Robert; Shelton, Troy; Sherman, Mark; Yena, Peggy; Black, Aaron; Bowen, Jay; Dicostanzo, Katie; Gastier-Foster, Julie; Leraas, Kristen M.; Lichtenberg, Tara M.; Pierson, Christopher R.; Ramirez, Nilsa C.; Taylor, Cynthia; Weaver, Stephanie; Wise, Lisa; Zmuda, Erik; Davidsen, Tanja; Demchok, John A.; Eley, Greg; Ferguson, Martin L.; Hutter, Carolyn M.; Shaw, Kenna R. Mills; Ozenberger, Bradley A.; Sheth, Margi; Sofia, Heidi J.; Tarnuzzer, Roy; Wang, Zhining; Yang, Liming; Zenklusen, Jean Claude; Ayala, Brenda; Baboud, Julien; Chudamani, Sudha; Jensen, Mark A.; Liu, Jia; Pihl, Todd; Raman, Rohini; Wan, Yunhu; Wu, Ye; Ally, Adrian; Auman, J. Todd; Balasundaram, Miruna; Balu, Saianand; Baylin, Stephen B.; Beroukhim, Rameen; Bootwalla, Moiz S.; Bowlby, Reanne; Bristow, Christopher A.; Brooks, Denise; Butterfield, Yaron; Carlsen, Rebecca; Carter, Scott; Chin, Lynda; Chu, Andy; Chuah, Eric; Cibulskis, Kristian; Clarke, Amanda; Coetzee, Simon G.; Dhalla, Noreen; Fennell, Tim; Fisher, Sheila; Gabriel, Stacey; Getz, Gad; Gibbs, Richard; Guin, Ranabir; Hadjipanayis, Angela; Hayes, Neil; Hinoue, Toshinori; Hoadley, Katherine; Holt, Robert A.; Hoyle, Alan P.; Jefferys, Stuart R.; Jones, Steven; Jones, Corbin D.; Kucherlapati, Raju; Lai, Phillip H.; Lander, Eric; Lee, Semin; Lichtenstein, Lee; Ma, Yussanne; Maglinte, Dennis T.; Mahadeshwar, Harshad S.; Marra, Marco A.; Mayo, Michael; Meng, Shaowu; Meyerson, Matthew L.; Mieczkowski, Piotr A.; Moore, Richard A.; Mose, Lisle E.; Mungall, Andrew J.; Pantazi, Angeliki; Parfenov, Michael; Park, Peter J.; Parker, Joel S.; Perou, Charles M.; Proto-Popov, Alexei; Ren, Xiaojia; Roach, Jeffrey; Sabedot, Thas S.; Schein, Jacqueline; Schumacher, Steven E.; Seidman, Jonathan G.; Seth, Sahil; Shen, Hui; Simons, Janae V.; Sipahimalani, Payal; Soloway, Matthew G.; Song, Xingzhi; Sun, Huandong; Tabak, Barbara; Tam, Angela; Tan, Donghui; Tang, Jiabin; Thiessen, Nina; Triche, Timothy, Jr.; Van Den Berg, David J.; Veluvolu, Umadevi; Waring, Scot; Weisenberger, Daniel J.; Wilkerson, Matthew D.; Wong, Tina; Wu, Junyuan; Xi, Liu; Xu, Andrew W.; Yang, Lixing; Zack, Travis I.; Zhang, Jianhua; Aksoy, B. Arman; Arachchi, Harindra; Benz, Chris; Bernard, Brady; Carlin, Daniel; Cho, Juok; DiCara, Daniel; Frazer, Scott; Fuller, Gregory N.; Gao, JianJiong; Gehlenborg, Nils; Haussler, David; Heiman, David I.; Iype, Lisa; Jacobsen, Anders; Ju, Zhenlin; Katzman, Sol; Kim, Hoon; Knijnenburg, Theo; Kreisberg, Richard Bailey; Lawrence, Michael S.; Lee, William; Leinonen, Kalle; Lin, Pei; Ling, Shiyun; Liu, Wenbin; Liu, Yingchun; Liu, Yuexin; Lu, Yiling; Mills, Gordon; Ng, Sam; Noble, Michael S.; Paull, Evan; Rao, Arvind; Reynolds, Sheila; Saksena, Gordon; Sanborn, Zack; Sander, Chris; Schultz, Nikolaus; Senbabaoglu, Yasin; Shen, Ronglai; Shmulevich, Ilya; Sinha, Rileen; Stuart, Josh; Sumer, Onur; Sun, Yichao; Tasman, Natalie; Taylor, Barry S.; Voet, Doug; Weinhold, Nils; Weinstein, John N.; Yang, Da; Yoshihara, Kosuke; Zheng, Siyuan; Zhang, Wei; Zou, Lihua; Abel, Ty; Sadeghi, Sara; Cohen, Mark L.; Eschbacher, Jenny; Hattab, Eyas M.; Raghunathan, Aditya; Schniederjan, Matthew J.; Aziz, Dina; Barnett, Gene; Barrett, Wendi; Bigner, Darell D.; Boice, Lori; Brewer, Cathy; Calatozzolo, Chiara; Campos, Benito; Carlotti, Carlos Gilberto, Jr.; Chan, Timothy A.; Cuppini, Lucia; Curley, Erin; Cuzzubbo, Stefania; Devine, Karen; DiMeco, Francesco; Duell, Rebecca; Elder, J. Bradley; Fehrenbach, Ashley; Finocchiaro, Gaetano; Friedman, William; Fulop, Jordonna; Gardner, Johanna; Hermes, Beth; Herold-Mende, Christel; Jungk, Christine; Kendler, Ady; Lehman, Norman L.; Lipp, Eric; Liu, Ouida; Mandt, Randy; McGraw, Mary; Mclendon, Roger; McPherson, Christopher; Neder, Luciano; Nguyen, Phuong; Noss, Ardene; Nunziata, Raffaele; Ostrom, Quinn T.; Palmer, Cheryl; Perin, Alessandro; Pollo, Bianca; Potapov, Alexander; Potapova, Olga; Rathmell, W. Kimryn; Rotin, Daniil; Scarpace, Lisa; Schilero, Cathy; Senecal, Kelly; Shimmel, Kristen; Shurkhay, Vsevolod; Sifri, Suzanne; Singh, Rosy; Sloan, Andrew E.; Smolenski, Kathy; Staugaitis, Susan M.; Steele, Ruth; Thorne, Leigh; Tirapelli, Daniela P. C.; Unterberg, Andreas; Vallurupalli, Mahitha; Wang, Yun; Warnick, Ronald; Williams, Felicia; Wolinsky, Yingli; Bell, Sue; Rosenberg, Mara; Stewart, Chip; Huang, Franklin; Grimsby, Jonna L.; Radenbaugh, Amie J.; Zhang, Jianan
2015-06-252.4KOAAIBrat, Daniel J.; Verhaak, Roel G. W.; Al-dape, Kenneth D.; Yung, W. K. Alfred; Salama, Sofie R.; Cooper, Lee A. D.; Rheinbay, Esther; Miller, C. Ryan; Vitucci, Mark; Morozova, Olena; Robertson, A. Gordon; Noushmehr, Houtan; Laird, Peter W.; Cherniack, Andrew D.; Akbani, Rehan; Huse, Jason T.; Ciriello, Giovanni; Poisson, Laila M.; Barnholtz-Sloan, Jill S.; Berger, Mitchel S.; Brennan, Cameron; Colen, Rivka R.; Colman, Howard; Flanders, Adam E.; Giannini, Caterina; Grifford, Mia; Iavarone, Antonio; Jain, Rajan; Joseph, Isaac; Kim, Jaegil; Kasaian, Katayoon; Mikkelsen, Tom; Murray, Bradley A.; O'Neill, Brian Patrick; Pachter, Lior; Parsons, Donald W.; Sougnez, Carrie; Sulman, Erik P.; Vandenberg, Scott R.; Van Meir, Erwin G.; von Deimling, Andreas; Zhang, Hailei; Crain, Daniel; Lau, Kevin; Mallery, David; Morris, Scott; Paulauskis, Joseph; Penny, Robert; Shelton, Troy; Sherman, Mark; Yena, Peggy; Black, Aaron; Bowen, Jay; Dicostanzo, Katie; Gastier-Foster, Julie; Leraas, Kristen M.; Lichtenberg, Tara M.; Pierson, Christopher R.; Ramirez, Nilsa C.; Taylor, Cynthia; Weaver, Stephanie; Wise, Lisa; Zmuda, Erik; Davidsen, Tanja; Demchok, John A.; Eley, Greg; Ferguson, Martin L.; Hutter, Carolyn M.; Shaw, Kenna R. Mills; Ozenberger, Bradley A.; Sheth, Margi; Sofia, Heidi J.; Tarnuzzer, Roy; Wang, Zhining; Yang, Liming; Zenklusen, Jean Claude; Ayala, Brenda; Baboud, Julien; Chudamani, Sudha; Jensen, Mark A.; Liu, Jia; Pihl, Todd; Raman, Rohini; Wan, Yunhu; Wu, Ye; Ally, Adrian; Auman, J. Todd; Balasundaram, Miruna; Balu, Saianand; Baylin, Stephen B.; Beroukhim, Rameen; Bootwalla, Moiz S.; Bowlby, Reanne; Bristow, Christopher A.; Brooks, Denise; Butterfield, Yaron; Carlsen, Rebecca; Carter, Scott; Chin, Lynda; Chu, Andy; Chuah, Eric; Cibulskis, Kristian; Clarke, Amanda; Coetzee, Simon G.; Dhalla, Noreen; Fennell, Tim; Fisher, Sheila; Gabriel, Stacey; Getz, Gad; Gibbs, Richard; Guin, Ranabir; Hadjipanayis, Angela; Hayes, Neil; Hinoue, Toshinori; Hoadley, Katherine; Holt, Robert A.; Hoyle, Alan P.; Jefferys, Stuart R.; Jones, Steven; Jones, Corbin D.; Kucherlapati, Raju; Lai, Phillip H.; Lander, Eric; Lee, Semin; Lichtenstein, Lee; Ma, Yussanne; Maglinte, Dennis T.; Mahadeshwar, Harshad S.; Marra, Marco A.; Mayo, Michael; Meng, Shaowu; Meyerson, Matthew L.; Mieczkowski, Piotr A.; Moore, Richard A.; Mose, Lisle E.; Mungall, Andrew J.; Pantazi, Angeliki; Parfenov, Michael; Park, Peter J.; Parker, Joel S.; Perou, Charles M.; Proto-Popov, Alexei; Ren, Xiaojia; Roach, Jeffrey; Sabedot, Thas S.; Schein, Jacqueline; Schumacher, Steven E.; Seidman, Jonathan G.; Seth, Sahil; Shen, Hui; Simons, Janae V.; Sipahimalani, Payal; Soloway, Matthew G.; Song, Xingzhi; Sun, Huandong; Tabak, Barbara; Tam, Angela; Tan, Donghui; Tang, Jiabin; Thiessen, Nina; Triche, Timothy, Jr.; Van Den Berg, David J.; Veluvolu, Umadevi; Waring, Scot; Weisenberger, Daniel J.; Wilkerson, Matthew D.; Wong, Tina; Wu, Junyuan; Xi, Liu; Xu, Andrew W.; Yang, Lixing; Zack, Travis I.; Zhang, Jianhua; Aksoy, B. Arman; Arachchi, Harindra; Benz, Chris; Bernard, Brady; Carlin, Daniel; Cho, Juok; DiCara, Daniel; Frazer, Scott; Fuller, Gregory N.; Gao, JianJiong; Gehlenborg, Nils; Haussler, David; Heiman, David I.; Iype, Lisa; Jacobsen, Anders; Ju, Zhenlin; Katzman, Sol; Kim, Hoon; Knijnenburg, Theo; Kreisberg, Richard Bailey; Lawrence, Michael S.; Lee, William; Leinonen, Kalle; Lin, Pei; Ling, Shiyun; Liu, Wenbin; Liu, Yingchun; Liu, Yuexin; Lu, Yiling; Mills, Gordon; Ng, Sam; Noble, Michael S.; Paull, Evan; Rao, Arvind; Reynolds, Sheila; Saksena, Gordon; Sanborn, Zack; Sander, Chris; Schultz, Nikolaus; Senbabaoglu, Yasin; Shen, Ronglai; Shmulevich, Ilya; Sinha, Rileen; Stuart, Josh; Sumer, Onur; Sun, Yichao; Tasman, Natalie; Taylor, Barry S.; Voet, Doug; Weinhold, Nils; Weinstein, John N.; Yang, Da; Yoshihara, Kosuke; Zheng, Siyuan; Zhang, Wei; Zou, Lihua; Abel, Ty; Sadeghi, Sara; Cohen, Mark L.; Eschbacher, Jenny; Hattab, Eyas M.; Raghunathan, Aditya; Schniederjan, Matthew J.; Aziz, Dina; Barnett, Gene; Barrett, Wendi; Bigner, Darell D.; Boice, Lori; Brewer, Cathy; Calatozzolo, Chiara; Campos, Benito; Carlotti, Carlos Gilberto, Jr.; Chan, Timothy A.; Cuppini, Lucia; Curley, Erin; Cuzzubbo, Stefania; Devine, Karen; DiMeco, Francesco; Duell, Rebecca; Elder, J. Bradley; Fehrenbach, Ashley; Finocchiaro, Gaetano; Friedman, William; Fulop, Jordonna; Gardner, Johanna; Hermes, Beth; Herold-Mende, Christel; Jungk, Christine; Kendler, Ady; Lehman, Norman L.; Lipp, Eric; Liu, Ouida; Mandt, Randy; McGraw, Mary; Mclendon, Roger; McPherson, Christopher; Neder, Luciano; Nguyen, Phuong; Noss, Ardene; Nunziata, Raffaele; Ostrom, Quinn T.; Palmer, Cheryl; Perin, Alessandro; Pollo, Bianca; Potapov, Alexander; Potapova, Olga; Rathmell, W. Kimryn; Rotin, Daniil; Scarpace, Lisa; Schilero, Cathy; Senecal, Kelly; Shimmel, Kristen; Shurkhay, Vsevolod; Sifri, Suzanne; Singh, Rosy; Sloan, Andrew E.; Smolenski, Kathy; Staugaitis, Susan M.; Steele, Ruth; Thorne, Leigh; Tirapelli, Daniela P. C.; Unterberg, Andreas; Vallurupalli, Mahitha; Wang, Yun; Warnick, Ronald; Williams, Felicia; Wolinsky, Yingli; Bell, Sue; Rosenberg, Mara; Stewart, Chip; Huang, Franklin; Grimsby, Jonna L.; Radenbaugh, Amie J.; Zhang, JiananShareSaveContrasting host-pathogen interactions and genome evolution in two generalist and specialist microsporidian pathogens of mosquitoesNATURE COMMUNICATIONS2015-05-1392OAAIDesjardins, Christopher A.; Sanscrainte, Neil D.; Goldberg, Jonathan M.; Heiman, David; Young, Sarah; Zeng, Qiandong; Madhani, Hiten D.; Becnel, James J.; Cuomo, Christina A.
NATURE COMMUNICATIONSIF15.7
2015-05-1392OAAIDesjardins, Christopher A.; Sanscrainte, Neil D.; Goldberg, Jonathan M.; Heiman, David; Young, Sarah; Zeng, Qiandong; Madhani, Hiten D.; Becnel, James J.; Cuomo, Christina A.ShareSaveComparative Genome Analysis of Trichophyton rubrum and Related Dermatophytes Reveals Candidate Genes Involved in InfectionMBIO2012-11-01398OAAIMartinez, Diego A.; Oliver, Brian G.; Graeser, Yvonne; Goldberg, Jonathan M.; Li, Wenjun; Martinez-Rossi, Nilce M.; Monod, Michel; Shelest, Ekaterina; Barton, Richard C.; Birch, Elizabeth; Brakhage, Axel A.; Chen, Zehua; Gurr, Sarah J.; Heiman, David; Heitman, Joseph; Kosti, Idit; Rossi, Antonio; Saif, Sakina; Samalova, Marketa; Saunders, Charles W.; Shea, Terrance; Summerbell, Richard C.; Xu, Jun; Young, Sarah; Zeng, Qiandong; Birren, Bruce W.; Cuomo, Christina A.; White, Theodore C.
MBIOIF4.7
2012-11-01398OAAIMartinez, Diego A.; Oliver, Brian G.; Graeser, Yvonne; Goldberg, Jonathan M.; Li, Wenjun; Martinez-Rossi, Nilce M.; Monod, Michel; Shelest, Ekaterina; Barton, Richard C.; Birch, Elizabeth; Brakhage, Axel A.; Chen, Zehua; Gurr, Sarah J.; Heiman, David; Heitman, Joseph; Kosti, Idit; Rossi, Antonio; Saif, Sakina; Samalova, Marketa; Saunders, Charles W.; Shea, Terrance; Summerbell, Richard C.; Xu, Jun; Young, Sarah; Zeng, Qiandong; Birren, Bruce W.; Cuomo, Christina A.; White, Theodore C.ShareSaveLifestyle transitions in plant pathogenic Colletotrichum fungi deciphered by genome and transcriptome analysesNATURE GENETICS2012-08-12854OAAIO'Connell, Richard J.; Thon, Michael R.; Hacquard, Stephane; Amyotte, Stefan G.; Kleemann, Jochen; Torres, Maria F.; Damm, Ulrike; Buiate, Ester A.; Epstein, Lynn; Alkan, Noam; Altmueller, Janine; Alvarado-Balderrama, Lucia; Bauser, Christopher A.; Becker, Christian; Birren, Bruce W.; Chen, Zehua; Choi, Jaeyoung; Crouch, Jo Anne; Duvick, Jonathan P.; Farman, Mark A.; Gan, Pamela; Heiman, David; Henrissat, Bernard; Howard, Richard J.; Kabbage, Mehdi; Koch, Christian; Kracher, Barbara; Kubo, Yasuyuki; Law, Audrey D.; Lebrun, Marc-Henri; Lee, Yong-Hwan; Miyara, Itay; Moore, Neil; Neumann, Ulla; Nordstroem, Karl; Panaccione, Daniel G.; Panstruga, Ralph; Place, Michael; Proctor, Robert H.; Prusky, Dov; Rech, Gabriel; Reinhardt, Richard; Rollins, Jeffrey A.; Rounsley, Steve; Schardl, Christopher L.; Schwartz, David C.; Shenoy, Narmada; Shirasu, Ken; Sikhakolli, Usha R.; Stueber, Kurt; Sukno, Serenella A.; Sweigard, James A.; Takano, Yoshitaka; Takahara, Hiroyuki; Trail, Frances; van der Does, H. Charlotte; Voll, Lars M.; Will, Isa; Young, Sarah; Zeng, Qiandong; Zhang, Jingze; Zhou, Shiguo; Dickman, Martin B.; Schulze-Lefert, Paul; van Themaat, Emiel Ver Loren; Ma, Li-Jun; Vaillancourt, Lisa J.
NATURE GENETICSIF31.8
2012-08-12854OAAIO'Connell, Richard J.; Thon, Michael R.; Hacquard, Stephane; Amyotte, Stefan G.; Kleemann, Jochen; Torres, Maria F.; Damm, Ulrike; Buiate, Ester A.; Epstein, Lynn; Alkan, Noam; Altmueller, Janine; Alvarado-Balderrama, Lucia; Bauser, Christopher A.; Becker, Christian; Birren, Bruce W.; Chen, Zehua; Choi, Jaeyoung; Crouch, Jo Anne; Duvick, Jonathan P.; Farman, Mark A.; Gan, Pamela; Heiman, David; Henrissat, Bernard; Howard, Richard J.; Kabbage, Mehdi; Koch, Christian; Kracher, Barbara; Kubo, Yasuyuki; Law, Audrey D.; Lebrun, Marc-Henri; Lee, Yong-Hwan; Miyara, Itay; Moore, Neil; Neumann, Ulla; Nordstroem, Karl; Panaccione, Daniel G.; Panstruga, Ralph; Place, Michael; Proctor, Robert H.; Prusky, Dov; Rech, Gabriel; Reinhardt, Richard; Rollins, Jeffrey A.; Rounsley, Steve; Schardl, Christopher L.; Schwartz, David C.; Shenoy, Narmada; Shirasu, Ken; Sikhakolli, Usha R.; Stueber, Kurt; Sukno, Serenella A.; Sweigard, James A.; Takano, Yoshitaka; Takahara, Hiroyuki; Trail, Frances; van der Does, H. Charlotte; Voll, Lars M.; Will, Isa; Young, Sarah; Zeng, Qiandong; Zhang, Jingze; Zhou, Shiguo; Dickman, Martin B.; Schulze-Lefert, Paul; van Themaat, Emiel Ver Loren; Ma, Li-Jun; Vaillancourt, Lisa J.ShareSaveMicrosporidian genome analysis reveals evolutionary strategies for obligate intracellular growthGENOME RESEARCH2012-07-18236OAAICuomo, Christina A.; Desjardins, Christopher A.; Bakowski, Malina A.; Goldberg, Jonathan; Ma, Amy T.; Becnel, James J.; Didier, Elizabeth S.; Fan, Lin; Heiman, David I.; Levin, Joshua Z.; Young, Sarah; Zeng, Qiandong; Troemel, Emily R.
GENOME RESEARCHIF5.5
2012-07-18236OAAICuomo, Christina A.; Desjardins, Christopher A.; Bakowski, Malina A.; Goldberg, Jonathan; Ma, Amy T.; Becnel, James J.; Didier, Elizabeth S.; Fan, Lin; Heiman, David I.; Levin, Joshua Z.; Young, Sarah; Zeng, Qiandong; Troemel, Emily R.ShareSaveComparative Genomic Analysis of Human Fungal Pathogens Causing ParacoccidioidomycosisPLOS GENETICS2011-10-27292OAAIDesjardins, Christopher A.; Champion, Mia D.; Holder, Jason W.; Muszewska, Anna; Goldberg, Jonathan; Bailao, Alexandre M.; Brigido, Marcelo Macedo; da Silva Ferreira, Marcia Eliana; Garcia, Ana Maria; Grynberg, Marcin; Gujja, Sharvari; Heiman, David I.; Henn, Matthew R.; Kodira, Chinnappa D.; Leon-Narvaez, Henry; Longo, Larissa V. G.; Ma, Li-Jun; Malavazi, Iran; Matsuo, Alisson L.; Morais, Flavia V.; Pereira, Maristela; Rodriguez-Brito, Sabrina; Sakthikumar, Sharadha; Salem-Izacc, Silvia M.; Sykes, Sean M.; Teixeira, Marcus Melo; Vallejo, Milene C.; Machado Telles Walter, Maria Emilia; Yandava, Chandri; Young, Sarah; Zeng, Qiandong; Zucker, Jeremy; Felipe, Maria Sueli; Goldman, Gustavo H.; Haas, Brian J.; McEwen, Juan G.; Nino-Vega, Gustavo; Puccia, Rosana; San-Blas, Gioconda; de Almeida Soares, Celia Maria; Birren, Bruce W.; Cuomo, Christina A.
PLOS GENETICSIF3.7
2011-10-27292OAAIDesjardins, Christopher A.; Champion, Mia D.; Holder, Jason W.; Muszewska, Anna; Goldberg, Jonathan; Bailao, Alexandre M.; Brigido, Marcelo Macedo; da Silva Ferreira, Marcia Eliana; Garcia, Ana Maria; Grynberg, Marcin; Gujja, Sharvari; Heiman, David I.; Henn, Matthew R.; Kodira, Chinnappa D.; Leon-Narvaez, Henry; Longo, Larissa V. G.; Ma, Li-Jun; Malavazi, Iran; Matsuo, Alisson L.; Morais, Flavia V.; Pereira, Maristela; Rodriguez-Brito, Sabrina; Sakthikumar, Sharadha; Salem-Izacc, Silvia M.; Sykes, Sean M.; Teixeira, Marcus Melo; Vallejo, Milene C.; Machado Telles Walter, Maria Emilia; Yandava, Chandri; Young, Sarah; Zeng, Qiandong; Zucker, Jeremy; Felipe, Maria Sueli; Goldman, Gustavo H.; Haas, Brian J.; McEwen, Juan G.; Nino-Vega, Gustavo; Puccia, Rosana; San-Blas, Gioconda; de Almeida Soares, Celia Maria; Birren, Bruce W.; Cuomo, Christina A.ShareSaveComparative Genomics Yields Insights into Niche Adaptation of Plant Vascular Wilt PathogensPLOS PATHOGENS2011-07-28517OAAIKlosterman, Steven J.; Subbarao, Krishna V.; Kang, Seogchan; Veronese, Paola; Gold, Scott E.; Thomma, Bart P. H. J.; Chen, Zehua; Henrissat, Bernard; Lee, Yong-Hwan; Park, Jongsun; Garcia-Pedrajas, Maria D.; Barbara, Dez J.; Anchieta, Amy; de Jonge, Ronnie; Santhanam, Parthasarathy; Maruthachalam, Karunakaran; Atallah, Zahi; Amyotte, Stefan G.; Paz, Zahi; Inderbitzin, Patrik; Hayes, Ryan J.; Heiman, David I.; Young, Sarah; Zeng, Qiandong; Engels, Reinhard; Galagan, James; Cuomo, Christina A.; Dobinson, Katherine F.; Ma, Li-Jun
PLOS PATHOGENSIF4.9
2011-07-28517OAAIKlosterman, Steven J.; Subbarao, Krishna V.; Kang, Seogchan; Veronese, Paola; Gold, Scott E.; Thomma, Bart P. H. J.; Chen, Zehua; Henrissat, Bernard; Lee, Yong-Hwan; Park, Jongsun; Garcia-Pedrajas, Maria D.; Barbara, Dez J.; Anchieta, Amy; de Jonge, Ronnie; Santhanam, Parthasarathy; Maruthachalam, Karunakaran; Atallah, Zahi; Amyotte, Stefan G.; Paz, Zahi; Inderbitzin, Patrik; Hayes, Ryan J.; Heiman, David I.; Young, Sarah; Zeng, Qiandong; Engels, Reinhard; Galagan, James; Cuomo, Christina A.; Dobinson, Katherine F.; Ma, Li-JunShareSavePopulation genomic sequencing of Coccidioides fungi reveals recent hybridization and transposon controlGENOME RESEARCH2010-06-01382OAAINeafsey, Daniel E.; Barker, Bridget M.; Sharpton, Thomas J.; Stajich, Jason E.; Park, Daniel J.; Whiston, Emily; Hung, Chiung-Yu; McMahan, Cody; White, Jared; Sykes, Sean; Heiman, David; Young, Sarah; Zeng, Qiandong; Abouelleil, Amr; Aftuck, Lynne; Bessette, Daniel; Brown, Adam; FitzGerald, Michael; Lui, Annie; Macdonald, J. Pendexter; Priest, Margaret; Orbach, Marc J.; Galgiani, John N.; Kirkland, Theo N.; Cole, Garry T.; Birren, Bruce W.; Henn, Matthew R.; Taylor, John W.; Rounsley, Steven D.
GENOME RESEARCHIF5.5
2010-06-01382OAAINeafsey, Daniel E.; Barker, Bridget M.; Sharpton, Thomas J.; Stajich, Jason E.; Park, Daniel J.; Whiston, Emily; Hung, Chiung-Yu; McMahan, Cody; White, Jared; Sykes, Sean; Heiman, David; Young, Sarah; Zeng, Qiandong; Abouelleil, Amr; Aftuck, Lynne; Bessette, Daniel; Brown, Adam; FitzGerald, Michael; Lui, Annie; Macdonald, J. Pendexter; Priest, Margaret; Orbach, Marc J.; Galgiani, John N.; Kirkland, Theo N.; Cole, Garry T.; Birren, Bruce W.; Henn, Matthew R.; Taylor, John W.; Rounsley, Steven D.ShareSaveNitazoxanide for the treatment of moderate to severe Clostridium difficile infection in hospitalized patients2008-09-010Heiman, David; Yangco, Bienvenido
2008-09-010PREAI
Heiman, David; Yangco, BienvenidoShareSaveMobilferrin is an intermediate in iron transport between transferrin and hemoglobin in K562 cells1996-09-1518OAAIConrad, ME; Umbreit, JN; Moore, EG; Heiman, D
1996-09-1518OAAIConrad, ME; Umbreit, JN; Moore, EG; Heiman, DShareSaveResearch Directions
No research directions