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J

Jun Hee Lee

university of michigan

52H-index
191Paper Count
1.9WCitation Count
Published Papers 89
Publication Date
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Fluorescence-Guided Spatial Mapping of p21-Expressing Senescent Cells in Aged Liver at Single-Cell Resolution
errBiomolecules
IF4.8
err2026-04-14
err0
errOAAI
errJer-En Hsu; Binsheng Wang; Yongha Hwang; Weiqiu Cheng; Qingyang Zhao; Yichen Si; Ming Xu; Hyun-Min Kang; Jun Hee Lee
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Seq-Scope-eXpanded: spatial omics beyond optical resolution
errNature Communications
IF15.7
err2026-02-10
err0
errOAAI
errAngelo Anacleto; Weiqiu Cheng; Qianlu Feng; Anna Park; Chun-Seok Cho; Yongha Hwang; Yongsung Kim; Yichen Si; Jer-En Hsu; Qingyang Zhao; Xiaoya Zhao; Daniel Kim; Mitchell Schrank; Alex William Schrader; Seokjin Yeo; Rosane Teles; Robert L. Modlin; Olesya Plazyo; Johann E. Gudjonsson; Myungjin Kim; Chang H. Kim; Hee-Sun Han; Hyun Min Kang; Jun Hee Lee
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Mechanosignaling and 3D morphological adaptation of MSCs in response to hydrogel rigidity underpin angiogenic and immunomodulatory efficacy for ischemic injury regeneration
errBIOACTIVE MATERIALS
IF20.3
err2025-11-01
err5
errOAAI
errYun, Yeo Gyun; Heo, Soon Chul; Jung, Ji-Won; Yeo, Donghyeon; Shin, Seong-Jin; Tsogtbaatar, Khaliunsarnai; Hwang, Yongsung; Lee, Jung-Hwan; Lee, Jun Hee; Kim, Hae-Won
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Advancing biological understanding of cellular senescence with computational multiomics
errNature Genetics
IF0
err2025-09-15
err0
PREAI
errSheng Li; Paula A. Agudelo Garcia; Constantin Aliferis; Michael J. Becich; Jazmin Calyeca; Benjamin D. Cosgrove; Jennifer Elisseeff; Negin Farzad; Elana J. Fertig; Carolyn Glass; Liangcai Gu; Qianjiang Hu; Zhicheng Ji; Melanie Königshoff; Nathan K. LeBrasseur; Dongmei Li; Anjun Ma; Qin Ma; Vilas Menon; Jacob T. Mitchell; Ana L. Mora; Sushma Nagaraj; Andrew C. Nelson; Laura J. Niedernhofer; Mauricio Rojas; Hash Brown Taha; Jinhua Wang; Siyuan Wang; Pei-Hsun Wu; Jichun Xie; Ming Xu; Miao Yu; Xu Zhang; Yue Zhao; Peter D. Adams; Cristina Aguayo-Mazzucato; Darren J. Baker; Christopher Benz; David A. Bernlohr; Marta Bueno; Jin Chen; Bennett G. Childs; Jeffrey H. Chuang; Dongjun Chung; Mythili Dileepan; Li Ding; Mingze Dong; Francesca Duncan; Archibald Enninful; William F. Flynn; Ana Catarina Franco; David Furman; Vesna Garovic; Stephanie Halene; Allison B. Herman; Ann V. Hertzel; Kanako Iwasaki; Hyeongseon Jeon; Jeon Woong Kang; Shilpita Karmakar; James L. Kirkland; Ron Korstanje; Erich Kummerfeld; Jun Hee Lee; Yang Liu; Yao Lu; Jose Lugo-Martinez; Helene Martini; Simon Melov; Nicolas Musi; João F. Passos; Samuel T. Peters; Irfan Rahman; Ramalakshmi Ramasamy; Alexandra N. Rindone; Paul D. Robbins; Paul Robson; Jhonny Rodriguez-Lopez; Lorena Rosas; Nadia Rosenthal; Marissa J. Schafer; Birgit Schilling; Elizabeth L. Schmidt; Kevin Schneider; Kaustav Sengupta; Jian Shu; Peter T. C. So; Li Sun; Tamar Tchkonia; Marcos G. Teneche; Natalia Vanegas; Julia Wang; Juan Xie; Shanshan Yin; Ke Zhang; Quan Zhu; Rong Fan
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Spatial omics enters the microscopic realm: opportunities and challenges
errTrends in Genetics
IF16.3
err2025-06-02
err0
PREAI
errYichen Si; Joo Sang Lee; Goo Jun; Hyun Min Kang; Jun Hee Lee
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Low Protein Diet Exacerbates Experimental Mouse Models of Colitis through Epithelial Autonomous and Nonautonomous Mechanisms
errThe Journal of Nutrition
IF3.8
err2025-04-09
err0
PREAI
errSumeet Solanki; Joseph Taranto; Ryan Rebernick; Cristina Castillo; Varun Ponnusamy; Madeline M Sykes; Scott F Leiser; Jun Hee Lee; Thomas Schmidt; Yatrik M Shah
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errSave
Seq-Scope: repurposing Illumina sequencing flow cells for high-resolution spatial transcriptomics
errNATURE PROTOCOLS
IF16
err2024-10-31
err0
PREAI
errKim, Yongsung; Cheng, Weiqiu; Cho, Chun-Seok; Hwang, Yongha; Si, Yichen; Park, Anna; Schrank, Mitchell; Hsu, Jer-En; Anacleto, Angelo; Xi, Jingyue; Kim, Myungjin; Pedersen, Ellen; Koues, Olivia I.; Wilson, Thomas; Lee, Changhee; Jun, Goo; Kang, Hyun Min; Lee, Jun Hee
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FICTURE: scalable segmentation-free analysis of submicron-resolution spatial transcriptomics
errNATURE METHODS
IF32.1
err2024-09-12
err2
PREAI
errSi, Yichen; Lee, ChangHee; Hwang, Yongha; Yun, Jeong H.; Cheng, Weiqiu; Cho, Chun-Seok; Quiros, Miguel; Nusrat, Asma; Zhang, Weizhou; Jun, Goo; Zollner, Sebastian; Lee, Jun Hee; Kang, Hyun Min
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Chaga mushroom extract suppresses oral cancer cell growth via inhibition of energy metabolism
errSCIENTIFIC REPORTS
IF3.9
err2024-05-09
err1
errOAAI
errYeo, Donghyeon; Yun, Yeo Gyun; Shin, Seong-Jin; Dashnyam, Khandmaa; Khurelbaatar, Anand; Lee, Jun Hee; Kim, Hae-Won
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Strontium/Silicon/Calcium-Releasing Hierarchically Structured 3D-Printed Scaffolds Accelerate Osteochondral Defect Repair
errADVANCED HEALTHCARE MATERIALS
IF9.6
err2024-04-29
err2
errOAAI
errLi, Cheng Ji; Park, Jeong-Hui; Jin, Gang Shi; Mandakhbayar, Nandin; Yeo, Donghyeon; Lee, Jun Hee; Lee, Jung-Hwan; Kim, Hye Sung; Kim, Hae-Won
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Iditarod, a Drosophila homolog of the Irisin precursor FNDC5, is critical for exercise performance and cardiac autophagy
errPROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
IF9.1
err2023-09-18
err1
errOAAI
errCobb, Tyler; Hwang, Irene; Soukar, Michael; Namkoong, Sim; Cho, Uhn - Soo; Safdar, Maryam; Kim, Myungjin; Wessells, Robert J.; Lee, Jun Hee
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Spatial mapping of cellular senescence: emerging challenges and opportunities
errNATURE AGING
IF19.4
err2023-07-03
err44
errOAAI
errGurkar, Aditi U.; Gerencser, Akos A.; Mora, Ana L.; Nelson, Andrew C.; Zhang, Anru R.; Lagnado, Anthony B.; Enninful, Archibald; Benz, Christopher; Furman, David; Beaulieu, Delphine; Jurk, Diana; Thompson, Elizabeth L.; Wu, Fei; Rodriguez, Fernanda; Barthel, Grant; Chen, Hao; Phatnani, Hemali; Heckenbach, Indra; Chuang, Jeffrey H.; Horrell, Jeremy; Petrescu, Joana; Alder, Jonathan K.; Lee, Jun Hee; Niedernhofer, Laura J.; Kumar, Manoj; Konigshoff, Melanie; Bueno, Marta; Sokka, Miiko; Scheibye-Knudsen, Morten; Neretti, Nicola; Eickelberg, Oliver; Adams, Peter D.; Hu, Qianjiang; Zhu, Quan; Porritt, Rebecca A.; Dong, Runze; Peters, Samuel; Victorelli, Stella; Pengo, Thomas; Khaliullin, Timur; Suryadevara, Vidyani; Fu, Xiaonan; Bar-Joseph, Ziv; Ji, Zhicheng; Passos, Joao F.
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SiftCell: A robust framework to detect and isolate cell-containing droplets from single-cell RNA sequence reads
errCELL SYSTEMS
IF7.7
err2023-07-01
err3
PREAI
errXi, Jingyue; Park, Sung Rye; Lee, Jun Hee; Kang, Hyun Min
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Spatial Single-cell Technologies for Exploring Gastrointestinal Tissue Transcriptome
errCOMPREHENSIVE PHYSIOLOGY
IF5.2
err2023-06-26
err1
PREAI
errKang, Hyun Min; Lee, Jun Hee
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Single cell and spatial sequencing define processes by which keratinocytes and fibroblasts amplify inflammatory responses in psoriasis
errNATURE COMMUNICATIONS
IF15.7
err2023-06-12
err64
errOAAI
errMa, Feiyang; Plazyo, Olesya; Billi, Allison C. C.; Tsoi, Lam C. C.; Xing, Xianying; Wasikowski, Rachael; Gharaee-Kermani, Mehrnaz; Hile, Grace; Jiang, Yanyun; Harms, Paul W. W.; Xing, Enze; Kirma, Joseph; Xi, Jingyue; Hsu, Jer-En; Sarkar, Mrinal K. K.; Chung, Yutein; Di Domizio, Jeremy; Gilliet, Michel; Ward, Nicole L. L.; Maverakis, Emanual; Klechevsky, Eynav; Voorhees, John J. J.; Elder, James T. T.; Lee, Jun Hee; Kahlenberg, J. Michelle; Pellegrini, Matteo; Modlin, Robert L. L.; Gudjonsson, Johann E. E.
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Fructose-1,6-bisphosphatase is a nonenzymatic safety valve that curtails AKT activation to prevent insulin hyperresponsiveness
errCELL METABOLISM
IF30.9
err2023-06-01
err8
errOAAI
errGu, Li; Zhu, Yahui; Watari, Kosuke; Lee, Maiya; Liu, Junlai; Perez, Sofia; Thai, Melinda; Mayfield, Joshua E.; Zhang, Bichen; Cunha e Rocha, Karina; Li, Fuming; Kim, Laura C.; Jones, Alexander C.; Wierzbicki, Igor H.; Liu, Xiao; Newton, Alexandra C.; Kisseleva, Tatiana; Lee, Jun Hee; Ying, Wei; Gonzalez, David J.; Saltiel, Alan R.; Simon, M. Celeste; Karin, Michael
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Drosophila PDZ-GEF, a guanine nucleotide exchange factor for Rap1 GTPase, reveals a novel upstream regulatory mechanism in the mitogen-activated protein kinase signaling pathway
errMOLECULAR AND CELLULAR BIOLOGY
IF2.7
err2023-03-27
err40
errOAAI
errLee, JH; Cho, KS; Lee, JY; Kim, DH; Lee, SB; Yoo, JS; Cha, GH; Chung, JK
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Dysregulated Amino Acid Sensing Drives Colorectal Cancer Growth and Metabolic Reprogramming Leading to Chemoresistance
errGASTROENTEROLOGY
IF25.1
err2023-03-01
err25
errOAAI
errSolanki, Sumeet; Sanchez, Katherine; Ponnusamy, Varun; Kota, Vasudha; Bell, Hannah N.; Cho, Chun-Seok; Kowalsky, Allison H.; Green, Michael; Lee, Jun Hee; Shah, Yatrik M.
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NIH SenNet Consortium to map senescent cells throughout the human lifespan to understand physiological health
errNATURE AGING
IF19.4
err2022-12-20
err49
errOAAI
errLee, Patty J.; Benz, Christopher C.; Blood, Philip; Boerner, Katy; Campisi, Judith; Chen, Feng; Daldrup-Link, Heike; De Jager, Phil; Ding, Li; Duncan, Francesca E.; Eickelberg, Oliver; Fan, Rong; Finkel, Toren; Furman, David; Garovic, Vesna; Gehlenborg, Nils; Glass, Carolyn; Heckenbach, Indra; Joseph, Ziv-Bar; Katiyar, Pragati; Kim, So-Jin; Koenigshoff, Melanie; Kuchel, George A.; Lee, Haesung; Lee, Jun Hee; Ma, Jian; Ma, Qin; Melov, Simon; Metis, Kay; Mora, Ana L.; Musi, Nicolas; Neretti, Nicola; Passos, Joao F.; Rahman, Irfan; Rivera-Mulia, Juan Carlos; Robson, Paul; Rojas, Mauricio; Roy, Ananda L.; Scheibye-Knudsen, Morten; Schilling, Birgit; Shi, Pixu; Silverstein, Jonathan C.; Suryadevara, Vidyani; Xie, Jichun; Wang, Jinhua; Wong, A. Ian; Niedernhofer, Laura J.; Wang, Siyuan (Steven); Anvari, Hannah; Balough, Julia; Benz, Christopher; Bons, Joanna; Brenerman, Boris; Evans, William; Gerencser, Akos; Gregory, Heather; Hansen, Malene; Justice, Jamie; Kapahi, Pankaj; Murad, Natalia; O'Broin, Amy; Pavone, Mary Ellen; Powell, Mark; Scott, Gary; Shanes, Elisheva; Shankaran, Mahalakshmi; Verdin, Eric; Winer, Daniel; Wu, Fei; Adams, Andrew; Blood, Philip D.; Bueckle, Andreas; Cao-Berg, Ivan; Chen, Hao; Davis, Michael; Filus, Shane; Hao, Yuhan; Hartman, Austin; Hasanaj, Euxhen; Helfer, Jesse; Herr, Bruce, II; Bar Joseph, Ziv; Molla, Gesmira; Mou, Gloria; Puerto, Juan; Quardokus, Ellen M.; Ropelewski, Alexander J.; Ruffalo, Matt; Satija, Rahul; Schwenk, Melissa; Scibek, Robin; Shirey, William; Sibilla, Max; Welling, Joel; Yuan, Zhou; Bonneau, Richard; Christiano, Angela; Izar, Benjamin; Menon, Vilas; Owens, David M.; Phatnani, Hemali; Smith, Colin; Suh, Yousin; Teich, Andrew F.; Bekker, Valerie; Chan, Cliburn; Coutavas, Elias; Hartwig, Matthew G.; Ji, Zhicheng; Nixon, Andrew B.; Dou, Zhixun; Rajagopal, Jayaraj; Slavov, Nikolai; Holmes, David, III; Jurk, Diana; Kirkland, James L.; Lagnado, Anthony; Tchkonia, Tamara; Abraham, Kristin; Dibattista, Amanda; Fridell, Yih-Woei; Howcroft, T. Kevin; Jhappan, Chamelli; Montes, Viviana Perez; Prabhudas, Mercy; Resat, Haluk; Taylor, Veronica; Kumar, Manoj; Cigarroa, Francisco; Cohn, Rachel; Cortes, Tiffany M.; Courtois, Elise; Chuang, Jeffrey; Dave, Monica; Domanskyi, Sergii; Enninga, Elizabeth Ann Lieser; Eryilmaz, Giray Naim; Espinoza, Sara E.; Gelfond, Jon; Kirkland, James; Kuo, Chia-Ling; Lehman, Julia S.; Aguayo-Mazzucato, Cristina; Meves, Alexander; Rani, Meenakshi; Sanders, Shane; Thibodeau, Asa; Tullius, Stefan G.; Ucar, Duygu; White, Brian; Wu, Qian; Xu, Ming; Yamaguchi, Seiji; Assarzadegan, Naziheh; Cho, Chun-Seok; Hwang, Irene; Hwang, Yongha; Xi, Jingyue; Adeyi, Oyedele A.; Aliferis, Constantin F.; Bartolomucci, Alessandro; Dong, Xiao; DuFresne-To, Mickayla J.; Ikramuddin, Sayeed; Johnson, Steve G.; Nelson, Andrew C.; Revelo, Xavier S.; Trevilla-Garcia, Claudia; Sedivy, John M.; Thompson, Elizabeth L.; Robbins, Paul D.; Wang, Jinhua; Aird, Katherine M.; Alder, Jonathan K.; Beaulieu, Delphine; Bueno, Marta; Calyeca, Jazmin; Chamucero-Millaris, Julian A.; Chan, Stephen Y.; Chung, Dongjun; Corbett, Anthony; Gorbunova, Vera; Gowdy, Kymberly M.; Gurkar, Aditi; Horowitz, Jeffrey C.; Hu, Qianjiang; Kaur, Gagandeep; Khaliullin, Timur O.; Lafyatis, Robert; Lanna, Serafina; Li, Dongmei; Ma, Anjun; Morris, Alison; Muthumalage, Thivanka M.; Peters, Victor; Pryhuber, Gloria S.; Reader, Brenda F.; Rosas, Lorena; Sembrat, John C.; Shaikh, Sadiya; Shi, Hangchuan; Stacey, Sean D.; St Croix, Claudette; Wang, Cankun; Wang, Qixin; Watts, Andrew; Gu, Liangcai; Lin, Yiing; Rabinovitch, Peter S.; Sweetwyne, Mariya T.; Artyomov, Maxim N.; Ballentine, Samuel J.; Chheda, Milan G.; Davies, Sherri R.; DiPersio, John F.; Fields, Ryan C.; Fitzpatrick, James A. J.; Fulton, Robert S.; Imai, Shin-ichiro; Jain, Sanjay; Ju, Tao; Kushnir, Vladimir M.; Link, Daniel C.; Ben Major, Michael; Oh, Stephen T.; Rapp, Daniel; Rettig, Michael P.; Stewart, Shelia A.; Veis, Deborah J.; Vij, Kiran R.; Wendl, Michael C.; Wyczalkowski, Matthew A.; Craft, Joseph E.; Enninful, Archibald; Farzad, Negin; Gershkovich, Peter; Halene, Stephanie; Kluger, Yuval; VanOudenhove, Jennifer; Xu, Mina; Yang, Junchen; Yang, Mingyu
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Identification of the niche and mobilization mechanism for tissue-protective multipotential bone marrow ILC progenitors
errSCIENCE ADVANCES
IF12.5
err2022-11-23
err4
errOAAI
errLiu, Qingyang; Lee, Jun Hee; Kang, Hyun Min; Kim, Chang H.
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Research Directions

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Co-authors
Cooperation Journals
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