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A gene desert required for regulatory control of pleiotropic Shox2 expression and embryonic survival Abassah-Oppong, Samuel; Zoia, Matteo; Mannion, Brandon J.; Rouco, Raquel; Tissieres, Virginie; Spurrell, Cailyn H.; Roland, Virginia; Darbellay, Fabrice; Itum, Anja; Gamart, Julie; Festa-Daroux, Tabitha A.; Sullivan, Carly S.; Kosicki, Michael; Rodriguez-Carballo, Eddie; Fukuda-Yuzawa, Yoko; Hunter, Riana D.; Novak, Catherine S.; Plajzer-Frick, Ingrid; Tran, Stella; Akiyama, Jennifer A.; Dickel, Diane E.; Lopez-Rios, Javier; Barozzi, Iros; Andrey, Guillaume; Visel, Axel; Pennacchio, Len A.; Cobb, John; Osterwalder, Marco Share Save
Increased enhancer-promoter interactions during developmental enhancer activation in mammals Chen, Zhuoxin; Snetkova, Valentina; Bower, Grace; Jacinto, Sandra; Clock, Benjamin; Dizehchi, Atrin; Barozzi, Iros; Mannion, Brandon J.; Alcaina-Caro, Ana; Lopez-Rios, Javier; Dickel, Diane E.; Visel, Axel; Pennacchio, Len A.; Kvon, Evgeny Z. Share Save
Conserved enhancers control notochord expression of vertebrate Brachyury Kemmler, Cassie L.; Smolikova, Jana; Moran, Hannah R.; Mannion, Brandon J.; Knapp, Dunja; Lim, Fabian; Czarkwiani, Anna; Hermosilla Aguayo, Viviana; Rapp, Vincent; Fitch, Olivia E.; Boetschi, Seraina; Selleri, Licia; Farley, Emma; Braasch, Ingo; Yun, Maximina; Visel, Axel; Osterwalder, Marco; Mosimann, Christian; Kozmik, Zbynek; Burger, Alexa Share Save
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Genome-wide fetalization of enhancer architecture in heart disease Spurrell, Cailyn H.; Barozzi, Iros; Kosicki, Michael; Mannion, Brandon J.; Blow, Matthew J.; Fukuda-Yuzawa, Yoko; Slaven, Neil; Afzal, Sarah Y.; Akiyama, Jennifer A.; Afzal, Veena; Tran, Stella; Plajzer-Frick, Ingrid; Novak, Catherine S.; Kato, Momoe; Lee, Elizabeth A.; Garvin, Tyler H.; Pham, Quan T.; Kronshage, Anne N.; Lisgo, Steven; Bristow, James; Cappola, Thomas P.; Morley, Michael P.; Margulies, Kenneth B.; Pennacchio, Len A.; Dickel, Diane E.; Visel, Axel Share Save
Coding and noncoding variants in EBF3 are involved in HADDS and simplex autism Padhi, Evin M.; Hayeck, Tristan J.; Cheng, Zhang; Chatterjee, Sumantra; Mannion, Brandon J.; Byrska-Bishop, Marta; Willems, Marjolaine; Pinson, Lucile; Redon, Sylvia; Benech, Caroline; Uguen, Kevin; Audebert-Bellanger, Severine; Le Marechal, Cedric; Ferec, Claude; Efthymiou, Stephanie; Rahman, Fatima; Maqbool, Shazia; Maroofian, Reza; Houlden, Henry; Musunuri, Rajeeva; Narzisi, Giuseppe; Abhyankar, Avinash; Hunter, Riana D.; Akiyama, Jennifer; Fries, Lauren E.; Ng, Jeffrey K.; Mehinovic, Elvisa; Stong, Nick; Allen, Andrew S.; Dickel, Diane E.; Bernier, Raphael A.; Gorkin, David U.; Pennacchio, Len A.; Zody, Michael C.; Turner, Tychele N. Share Save
Ultraconserved enhancer function does not require perfect sequence conservation Snetkova, Valentina; Ypsilanti, Athena R.; Akiyama, Jennifer A.; Mannion, Brandon J.; Plajzer-Frick, Ingrid; Novak, Catherine S.; Harrington, Anne N.; Pham, Quan T.; Kato, Momoe; Zhu, Yiwen; Godoy, Janeth; Meky, Eman; Hunter, Riana D.; Shi, Marie; Kvon, Evgeny Z.; Afzal, Veena; Tran, Stella; Rubenstein, John L. R.; Visel, Axel; Pennacchio, Len A.; Dickel, Diane E. Share Save
ATAC-Seq Reveals an Isl1 Enhancer That Regulates Sinoatrial Node Development and Function Galang, Giselle; Mandla, Ravi; Ruan, Hongmei; Jung, Catherine; Sinha, Tanvi; Stone, Nicole R.; Wu, Roland S.; Mannion, Brandon J.; Allu, Prasanna K. R.; Chang, Kevin; Rammohan, Ashwin; Shi, Marie B.; Pennacchio, Len A.; Black, Brian L.; Vedantham, Vasanth Share Save
Supervised enhancer prediction with epigenetic pattern recognition and targeted validation Sethi, Anurag; Gu, Mengting; Gumusgoz, Emrah; Chan, Landon; Yan, Koon-Kiu; Rozowsky, Joel; Barozzi, Iros; Afzal, Veena; Akiyama, Jennifer A.; Plajzer-Frick, Ingrid; Yan, Chengfei; Novak, Catherine S.; Kato, Momoe; Garvin, Tyler H.; Pham, Quan; Harrington, Anne; Mannion, Brandon J.; Lee, Elizabeth A.; Fukuda-Yuzawa, Yoko; Visel, Axel; Dickel, Diane E.; Yip, Kevin Y.; Sutton, Richard; Pennacchio, Len A.; Gerstein, Mark Share Save
Genome-wide compendium and functional assessment of in vivo heart enhancers Dickel, Diane E.; Barozzi, Iros; Zhu, Yiwen; Fukuda-Yuzawa, Yoko; Osterwalder, Marco; Mannion, Brandon J.; May, Dalit; Spurrell, Cailyn H.; Plajzer-Frick, Ingrid; Pickle, Catherine S.; Lee, Elizabeth; Garvin, Tyler H.; Kato, Momoe; Akiyama, Jennifer A.; Afzal, Veena; Lee, Ah Young; Gorkin, David U.; Ren, Bing; Rubin, Edward M.; Visel, Axel; Pennacchio, Len A. Share Save
Nanosensor dosimetry of mouse blood proteins after exposure to ionizing radiation Kim, Dokyoon; Marchetti, Francesco; Chen, Zuxiong; Zaric, Sasa; Wilson, Robert J.; Hall, Drew A.; Gaster, Richard S.; Lee, Jung-Rok; Wang, Junyi; Osterfeld, Sebastian J.; Yu, Heng; White, Robert M.; Blakely, William F.; Peterson, Leif E.; Bhatnagar, Sandhya; Mannion, Brandon; Tseng, Serena; Roth, Kristen; Coleman, Matthew; Snijders, Antoine M.; Wyrobek, Andrew J.; Wang, Shan X. Share Save
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