arrow
Back
A

Adam R. Abate

university of california san francisco

67H-index
243Paper Count
1.9WCitation Count
Published Papers 112
Publication Date
PURE-seq integrates FACS and PIP-seq for single-cell genomics of ultra-rare cells
err2026-01-21
err0
errOAAI
errSixuan Pan; Inés Fernández-Maestre; Kai-Chun Chang; Stéphane Van Haver; Matthew G. Wereski; Alexandra M. Haugh; Katy K. Tsai; Adil I. Daud; Robert L. Bowman; Harish N. Vasudevan; Ross L. Levine; Adam R. Abate
errShare
errSave
Myeloid-mesenchymal crosstalk drives ARG1dependent profibrotic metabolism via ornithine in lung fibrosis
err2025-11-03
err1
errOAAI
errYadav, Preeti; Ortega, Javier Gomez; Dabral, Prerna; Tamaki, Whitney; Chien, Charles; Chang, Kai-Chun; Biswas, Nivedita; Pan, Sixuan; Nilsson, Julia; Yin, Xiaoyang; Bhattacharyya, Aritra; Boostanpour, Kaveh; Jujaray, Tanay; Wang, Jasper T.; Tsukui, Tatsuya; Molina, Christopher J.; Auyeung, Vincent C.; Sheppard, Dean; Li, Baosheng; Maishan, Mazharul; Taenaka, Hiroki; Matthay, Michael A.; Muramatsu, Rieko; Maliskova, Lenka; Ghosh, Arnab; Eckalbar, Walter L.; Molofsky, Ari B.; Tamaki, Stanley J.; Bivona, Trever G.; Abate, Adam R.; Wagner, Allon; Pillai, Satish K.; Wolters, Paul J.; Tharp, Kevin M.; Bhattacharya, Mallar
errShare
errSave
Deterministic Cell Pairing with Simultaneous Microfluidic Merging and Sorting of Droplets
err2025-09-26
err0
PREAI
errKevin Michael Joslin; Sophia Dateshidze; Seung Won Shin; Adam R Abate; Iain Clark
errShare
errSave
Microbiome Single Cell Atlases Generated with a Commercial Instrument
err2025-06-03
err0
errOAAI
errXiangpeng Li; Linfeng Xu; Benjamin Demaree; Cecilia Noecker; Jordan E. Bisanz; Daniel W. Weisgerber; Cyrus Modavi; Peter J. Turnbaugh; Adam R. Abate
errShare
errSave
DNA MUTATION SEQUENCING AND METHYLATION ANALYSIS OF SOMATICNF1 MUTANT IDH-WILDTYPE GLIOBLASTOMA IDENTIFIES THREE EPIGENETIC GROUPS ANDCDKN2A/B LOSS AS A NEGATIVE PROGNOSTIC BIOMARKER
err2024-11-11
err0
PREAI
errMirchia, Kanish; Pan, Sixuan; Payne, Emily; Liu, John; Peeran, Zain; Shukla, Poojan; Young, Jacob; Gupta, Rohit; Wu, Jasper; Pak, Joanna; Seo, Kyounghee; Ozawa, Tomoko; Na, Brian; Reddy, Alyssa; Braunstein, Steve; Phillips, Joanna; Chang, Susan; Solomon, David; Perry, Arie; Raleigh, David; Berger, Mitchel; Abate, Adam; Vasudevan, Harish
errShare
errSave
Multiomic single cell sequencing identifies stemlike nature of mixed phenotype acute leukemia
err2024-09-18
err0
errOAAI
errPeretz, Cheryl A. C.; Kennedy, Vanessa E.; Walia, Anushka; Delley, Cyrille L.; Koh, Andrew; Tran, Elaine; Clark, Iain C.; Hayford, Corey E.; D'Amato, Chris; Xue, Yi; Fontanez, Kristina M.; May-Zhang, Aaron A.; Smithers, Trinity; Agam, Yigal; Wang, Qian; Dai, Hai-ping; Roy, Ritu; Logan, Aaron C.; Perl, Alexander E.; Abate, Adam; Olshen, Adam; Smith, Catherine C.
errShare
errSave
FIND-seq: high-throughput nucleic acid cytometry for rare single-cell transcriptomics
err2024-07-22
err1
PREAI
errShin, Seung Won; Mudvari, Prakriti; Thaploo, Shravan; Wheeler, Michael A.; Douek, Daniel C.; Quintana, Francisco J.; Boritz, Eli A.; Abate, Adam R.; Clark, Iain C.
errShare
errSave
Printhead on a chip: empowering droplet-based bioprinting with microfluidics
err2024-03-01
err4
PREAI
errZhang, Pengfei; Liu, Congying; Modavi, Cyrus; Abate, Adam; Chen, Huawei
errShare
errSave
Functional interactions between neurofibromatosis tumor suppressors underlie Schwann cell tumor de-differentiation and treatment resistance
err2024-01-12
err3
errOAAI
errVasudevan, Harish N.; Payne, Emily; Delley, Cyrille L.; Liu, S. John; Mirchia, Kanish; Sale, Matthew J.; Lastella, Sydney; Nunez, Maria Sacconi; Lucas, Calixto-Hope G.; Eaton, Charlotte D.; Casey-Clyde, Tim; Magill, Stephen T.; Chen, William C.; Braunstein, Steve E.; Perry, Arie; Jacques, Line; Reddy, Alyssa T.; Pekmezci, Melike; Abate, Adam R.; McCormick, Frank; Raleigh, David R.
errShare
errSave
Microfluidics-free single-cell genomics with templated emulsification
err2023-03-06
err64
errOAAI
errClark, Iain C.; Fontanez, Kristina M.; Meltzer, Robert H.; Xue, Yi; Hayford, Corey; May-Zhang, Aaron; D'Amato, Chris; Osman, Ahmad; Zhang, Jesse Q.; Hettige, Pabodha; Ishibashi, Jacob S. A.; Delley, Cyrille L.; Weisgerber, Daniel W.; Replogle, Joseph M.; Jost, Marco; Phong, Kiet T.; Kennedy, Vanessa E.; Peretz, Cheryl A. C.; Kim, Esther A.; Song, Siyou; Karlon, William; Weissman, Jonathan S.; Smith, Catherine C.; Gartner, Zev J.; Abate, Adam R.
errShare
errSave
Flow cytometric printing of double emulsions into open droplet arrays
err2023-01-01
err6
PREAI
errZhang, Pengfei; Xu, Linfeng; Chen, Huawei; Abate, Adam R.
errShare
errSave
Viral load quantitation at the point-of-care with shaken digital droplet RT-LAMP
err2023-01-01
err0
errOAAI
errWeisgerber, Daniel W.; Langer, Krzysztof; Servellita, Venice; Xu, Peng; Chiu, Charles Y.; Abate, Adam R.
errShare
errSave
Controlled fabrication of functional liver spheroids with microfluidic flow cytometric printing
err2022-08-23
err10
PREAI
errZhang, Pengfei; Li, Xiangpeng; Chen, Jennifer Y.; Abate, Adam R.
errShare
errSave
G1/S restriction point coordinates phasic gene expression and cell differentiation
err2022-06-27
err6
errOAAI
errDeVeale, Brian; Liu, Leqian; Boileau, Ryan; Swindlehurst-Chan, Jennifer; Marsh, Bryan; Freimer, Jacob W.; Abate, Adam; Blelloch, Robert
errShare
errSave
Polyhedral Particles with Controlled Concavity by Indentation Templating
err2022-05-17
err1
errOAAI
errWeisgerber, Daniel W.; Hatori, Makiko; Li, Xiangpeng; Abate, Adam R.
errShare
errSave
Droplet-microfluidics-assisted sequencing of HIV proviruses and their integration sites in cells from people on antiretroviral therapy
err2022-03-28
err28
errOAAI
errSun, Chen; Liu, Leqian; Perez, Liliana; Li, Xiangpeng; Liu, Yifan; Xu, Peng; Boritz, Eli A.; Mullins, James, I; Abate, Adam R.
errShare
errSave
Microbowls with Controlled Concavity for Accurate Microscale Mass Spectrometry
err2022-02-10
err9
errOAAI
errXu, Linfeng; Li, Xiangpeng; Li, Wenzong; Chang, Kai-chun; Yang, Hyunjun; Tao, Nannan; Zhang, Pengfei; Payne, Emory M.; Modavi, Cyrus; Humphries, Jacqueline; Lu, Chia-Wei; Abate, Adam R.
errShare
errSave
Dual-layered hydrogels allow complete genome recovery with nucleic acid cytometry
err2022-02-10
err4
errOAAI
errHatori, Makiko N.; Modavi, Cyrus; Xu, Peng; Weisgerber, Daniel; Abate, Adam R.
errShare
errSave
Characterizing cell interactions at scale with made-to-order droplet ensembles (MODEs)
err2022-01-24
err27
errOAAI
errMadrigal, Justin L.; Schoepp, Nathan G.; Xu, Linfeng; Powell, Codian S.; Delley, Cyrille L.; Siltanen, Christian A.; Danao, Jay; Srinivasan, Maithreyan; Cole, Russell H.; Abate, Adam R.
errShare
errSave
Rapid parallel generation of a fluorescently barcoded drop library from a microtiter plate using the plate-interfacing parallel encapsulation (PIPE) chip
err2022-01-01
err2
errOAAI
errZath, Geoffrey K.; Sperling, Ralph A.; Hoffman, Carter W.; Bikos, Dimitri A.; Abbasi, Reha; Abate, Adam R.; Weitz, David A.; Chang, Connie B.
errShare
errSave