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H

Haim Ashkenazy

max planck institute for biology

27H-index
57Paper Count
1.0WCitation Count
Published Papers 32
Publication Date
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Clustering the protein universe of life using DIAMOND DeepClust
errNature Methods
IF32.1
err2026-03-24
err0
errOAAI
errBenjamin J. Buchfink; Émile Barbé; Haim Ashkenazy; Klaus Reuter; John A. Kennedy; Hajk-Georg Drost
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A comparison of 27 Arabidopsis thaliana genomes and the path toward an unbiased characterization of genetic polymorphism
errNature Genetics
IF0
err2025-08-19
err0
errOAAI
errAnna A. Igolkina; Sebastian Vorbrugg; Fernando A. Rabanal; Hai-Jun Liu; Haim Ashkenazy; Aleksandra E. Kornienko; Joffrey Fitz; Max Collenberg; Christian Kubica; Almudena Mollá Morales; Benjamin Jaegle; Travis Wrightsman; Vitaly Voloshin; Alexander D. Bezlepsky; Victor Llaca; Viktoria Nizhynska; Ilka Reichardt; Ilja Bezrukov; Christa Lanz; Felix Bemm; Pádraic J. Flood; Sileshi Nemomissa; Angela Hancock; Ya-Long Guo; Paul Kersey; Detlef Weigel; Magnus Nordborg
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errSave
Spatial metatranscriptomics resolves host-bacteria-fungi interactomes
errNATURE BIOTECHNOLOGY
IF41.7
err2023-11-20
err29
errOAAI
errSaarenpaeae, Sami; Shalev, Or; Ashkenazy, Haim; Carlos, Vanessa; Lundberg, Derek Severi; Weigel, Detlef; Giacomello, Stefania
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errSave
Targeted nanoparticles modify neutrophil function in vivo
errFRONTIERS IN IMMUNOLOGY
IF5.9
err2022-10-05
err13
errOAAI
errVols, Sandra; Kaisar-Iluz, Naomi; Shaul, Merav E.; Ryvkin, Arik; Ashkenazy, Haim; Yehuda, Avishag; Atamneh, Ronza; Heinberg, Adina; Ben-David-Naim, Meital; Nadav, Menucha; Hirsch, Shira; Mitesser, Vera; Salpeter, Seth J.; Dzikowski, Ron; Hayouka, Zvi; Gershoni, Jonathan M.; Fridlender, Zvi G.; Granot, Zvi
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errSave
Commensal Pseudomonas strains facilitate protective response against pathogens in the host plant
errNATURE ECOLOGY & EVOLUTION
IF14.5
err2022-02-24
err51
errOAAI
errShalev, Or; Karasov, Talia L.; Lundberg, Derek S.; Ashkenazy, Haim; Ayutthaya, Pratchaya Pramoj Na; Weigel, Detlef
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errSave
Commensal Pseudomonas protect Arabidopsis thaliana from a coexisting pathogen via multiple lineage-dependent mechanisms
errISME JOURNAL
IF10
err2021-12-11
err15
errOAAI
errShalev, Or; Ashkenazy, Haim; Neumann, Manuela; Weigel, Detlef
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errSave
PredictProtein - Predicting Protein Structure and Function for 29 Years
errNUCLEIC ACIDS RESEARCH
IF13.1
err2021-05-17
err160
errOAAI
errBernhofer, Michael; Dallago, Christian; Karl, Tim; Satagopam, Venkata; Heinzinger, Michael; Littmann, Maria; Olenyi, Tobias; Qiu, Jiajun; Schuetze, Konstantin; Yachdav, Guy; Ashkenazy, Haim; Ben-Tal, Nir; Bromberg, Yana; Goldberg, Tatyana; Kajan, Laszlo; O'Donoghue, Sean; Sander, Chris; Schafferhans, Andrea; Schlessinger, Avner; Vriend, Gerrit; Mirdita, Milot; Gawron, Piotr; Gu, Wei; Jarosz, Yohan; Trefois, Christophe; Steinegger, Martin; Schneider, Reinhard; Rost, Burkhard
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errSave
Genetic variation, environment and demography intersect to shape Arabidopsis defense metabolite variation across Europe
errELIFE
IF0
err2021-05-05
err28
errOAAI
errKatz, Ella; Li, Jia-Jie; Jaegle, Benjamin; Ashkenazy, Haim; Abrahams, Shawn R.; Bagaza, Clement; Holden, Samuel; Pires, Chris J.; Angelovici, Ruthie; Kliebenstein, Daniel J.
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errSave
Domain-Scan: Combinatorial Sero-Diagnosis of Infectious Diseases Using Machine Learning
errFRONTIERS IN IMMUNOLOGY
IF5.9
err2021-02-10
err5
errOAAI
errHada-Neeman, Smadar; Weiss-Ottolenghi, Yael; Wagner, Naama; Avram, Oren; Ashkenazy, Haim; Maor, Yaakov; Sklan, Ella H.; Shcherbakov, Dmitry; Pupko, Tal; Gershoni, Jonathan M.
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errSave
A Truncated Singleton NLR Causes Hybrid Necrosis in Arabidopsis thaliana
errMOLECULAR BIOLOGY AND EVOLUTION
IF5.3
err2020-09-23
err31
errOAAI
errBarragan, Ana Cristina; Collenberg, Maximilian; Wang, Jinge; Lee, Rachelle R. Q.; Cher, Wei Yuan; Rabanal, Fernando A.; Ashkenazy, Haim; Weigel, Detlef; Chae, Eunyoung
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errSave
Using Phylogeny to Decipher Electrogenicity in Cation/Proton Antiporters
errBIOPHYSICAL JOURNAL
IF3.1
err2019-02-01
err0
errOAAI
errMasrati, Gal; Dwivedi, Manish; Rimon, Abraham; Gluck-Margolin, Yael; Kessel, Amit; Ashkenazy, Haim; Mayrose, Itay; Padan, Etana; Ben-Tal, Nir
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errSave
Broad phylogenetic analysis of cation/proton antiporters reveals transport determinants
errNATURE COMMUNICATIONS
IF15.7
err2018-10-11
err64
errOAAI
errMasrati, Gal; Dwivedi, Manish; Rimon, Abraham; Gluck-Margolin, Yael; Kessel, Amit; Ashkenazy, Haim; Mayrose, Itay; Padan, Etana; Ben-Tal, Nir
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errSave
A Simulation-Based Approach to Statistical Alignment
errSYSTEMATIC BIOLOGY
IF5.7
err2018-09-15
err6
PREAI
errKarin, Eli Levy; Ashkenazy, Haim; Hein, Jotun; Pupko, Tal
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errSave
ASAp - A Webserver for Immunoglobulin-Sequencing Analysis pipeline
errFRONTIERS IN IMMUNOLOGY
IF5.9
err2018-07-30
err11
errOAAI
errAvram, Oren; Vaisman-Mentesh, Anna; Yehezkel, Dror; Ashkenazy, Haim; Pupko, Tal; Wine, Yariv
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errSave
Multiple Sequence Alignment Averaging Improves Phylogeny Reconstruction
errSYSTEMATIC BIOLOGY
IF5.7
err2018-06-22
err23
errOAAI
errAshkenazy, Haim; Sela, Itamar; Karin, Eli Levy; Landan, Giddy; Pupko, Tal
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errSave
Phage display peptide libraries: deviations from randomness and correctives
errNUCLEIC ACIDS RESEARCH
IF13.1
err2018-02-06
err35
errOAAI
errRyvkin, Arie; Ashkenazy, Haim; Weiss-Ottolenghi, Yael; Piller, Chen; Pupko, Tal; Gershoni, Jonathan M.
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errSave
Inferring Rates and Length-Distributions of Indels Using Approximate Bayesian Computation
errGENOME BIOLOGY AND EVOLUTION
IF2.8
err2017-05-01
err5
errOAAI
errKarin, Eli Levy; Shkedy, Dafna; Ashkenazy, Haim; Cartwright, Reed A.; Pupko, Tal
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errSave
SpartaABC: a web server to simulate sequences with indel parameters inferred using an approximate Bayesian computation algorithm
errNUCLEIC ACIDS RESEARCH
IF13.1
err2017-04-29
err5
errOAAI
errAshkenazy, Haim; Karin, Eli Levy; Mertens, Zach; Cartwright, Reed A.; Pupko, Tal
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errSave
TraitRateProp: a web server for the detection of trait-dependent evolutionary rate shifts in sequence sites
errNUCLEIC ACIDS RESEARCH
IF13.1
err2017-04-27
err7
errOAAI
errKarin, Eli Levy; Ashkenazy, Haim; Wicke, Susann; Pupko, Tal; Mayrose, Itay
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errSave
ConSurf 2016: an improved methodology to estimate and visualize evolutionary conservation in macromolecules
errNUCLEIC ACIDS RESEARCH
IF13.1
err2016-05-10
err2.2K
errOAAI
errAshkenazy, Haim; Abadi, Shiran; Martz, Eric; Chay, Ofer; Mayrose, Itay; Pupko, Tal; Ben-Tal, Nir
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Research Directions

No research directions
Co-authors
Cooperation Journals
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Charles A. Dinarello
H-index: 196 · Papers: 1.2K
C
Chris Sander
H-index: 191 · Papers: 849
D
Detlef Weigel
H-index: 163 · Papers: 944
B
Burkhard Rost
H-index: 101 · Papers: 705
E
Eytan Ruppin
H-index: 98 · Papers: 1.0K
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