arrow
Back
I

Ira Cooke

James Cook University

28H-index
155Paper Count
3.5KCitation Count
Published Papers 51
Publication Date
The Southern Ocean as an evolutionary arena for structural genomic variation
err2026-04-27
err0
errOAAI
errSally C.Y. Lau; Nerida G. Wilson; Ira R. Cooke; Kerstin Johannesson; Jan M. Strugnell
errShare
errSave
errShare
errSave
Major transitions in early coral development: novel insights enabled by visualisation of a comprehensive transcriptomic dataset for Acropora millepora
err2026-01-29
err0
errOAAI
errRamona Brunner; Mila Grinblat; Aurelie Moya; Sylvain Foret; David C. Hayward; Bruno Lapeyre; Eldon E. Ball; Ira Cooke; David J. Miller
errShare
errSave
errShare
errSave
Development and Validation of a Standardised Genomic Tool for Conservation Management of the Koala (Phascolarctos cinereus)
err2025-11-22
err0
errOAAI
errLily F. Donnelly; Shannon R. Kjeldsen; Matthew J. Lott; Kellie Leigh; Matthew A. Field; Ira R. Cooke; Belinda R. Wright; Kyall R. Zenger
errShare
errSave
Assessing the potential for assisted gene flow to enhance heat tolerance of multiple coral genera over three key phenotypic traits
err2025-06-01
err0
errOAAI
errMacadam, Alex; Morgans, Carys; Cheok, Jessica; Damjanovic, Katarina; Ciampaglia, Melissa; Toor, Maren; Laffy, Patrick; Cooke, Ira R.; Strugnell, Jan M.; Quigley, Kate M.
errShare
errSave
Synthesis of transcriptomic studies reveals a core response to heat stress in abalone (genus Haliotis)
err2025-05-13
err0
errOAAI
errBarkan, Roy; Cooke, Ira; Watson, Sue-Ann; Strugnell, Jan M.
errShare
errSave
Putting Structural Variants Into Practice: The Role of Chromosomal Inversions in the Management of Marine Environments
err2025-05-08
err0
errOAAI
errNadja M. Schneller; Jan M. Strugnell; Matt A. Field; Kerstin Johannesson; Ira Cooke
errShare
errSave
Rapid Evolution in Action: Environmental Filtering Supports Coral Adaptation to a Hot, Acidic, and Deoxygenated Extreme Habitat
err2025-03-03
err0
errOAAI
errLeiva, Carlos; Torda, Gergely; Zhou, Chengran; Pan, Yunrui; Harris, Jess; Xiang, Xueyan; Tan, Shangjin; Tian, Wei; Hume, Benjamin; Miller, David J.; Li, Qiye; Zhang, Guojie; Cooke, Ira; Rodolfo-Metalpa, Riccardo
errShare
errSave
Circumpolar and Regional Seascape Drivers of Genomic Variation in a Southern Ocean Octopus
err2024-12-04
err0
PREAI
errLau, Sally C. Y.; Wilson, Nerida G.; Watts, Phillip C.; Silva, Catarina N. S.; Cooke, Ira R.; Allcock, A. Louise; Mark, Felix C.; Strugnell, Jan M.
errShare
errSave
Harnessing genomic technologies for one health solutions in the tropics
err2024-11-14
err1
errOAAI
errCalcino, Andrew; Cooke, Ira; Cowman, Pete; Higgie, Megan; Massault, Cecile; Schmitz, Ulf; Whittaker, Maxine; Field, Matt A.
errShare
errSave
Microbiome manipulation by corals and other Cnidaria via quorum quenching
err2024-07-01
err0
PREAI
errMason, Benjamin; Hayward, David C.; Moya, Aurelie; Cooke, Ira; Sorenson, Alanna; Brunner, Ramona; Andrade, Natalia; Huerlimann, Roger; Bourne, David G.; Schaeffer, Patrick; Grinblat, Mila; Ravasi, Timothy; Ueda, Nobuo; Tang, Sen-Lin; Ball, Eldon E.; Miller, David J.
errShare
errSave
SNP data reveals the complex and diverse evolutionary history of the blue-ringed octopus genus (Octopodidae: Hapalochlaena) in the Asia-Pacific
err2023-09-01
err2
errOAAI
errWhitelaw, Brooke L.; Finn, Julian K.; Zenger, Kyall R.; Cooke, Ira R.; Morse, Peter; Strugnell, Jan M.
errShare
errSave
Evolutionary Responses of a Reef-building Coral to Climate Change at the End of the Last Glacial Maximum
err2022-10-11
err13
errOAAI
errZhang, Jia; Richards, Zoe T.; Adam, Arne A. S.; Chan, Cheong Xin; Shinzato, Chuya; Gilmour, James; Thomas, Luke; Strugnell, Jan M.; Miller, David J.; Cooke, Ira
errShare
errSave
Benchmarks in antimicrobial peptide prediction are biased due to the selection of negative data
err2022-08-21
err30
errOAAI
errSidorczuk, Katarzyna; Gagat, Przemyslaw; Pietluch, Filip; Kala, Jakub; Rafacz, Dominik; Bakala, Laura; Slowik, Jadwiga; Kolenda, Rafal; Rodiger, Stefan; Fingerhut, Legana C. H. W.; Cooke, Ira R.; Mackiewicz, Pawel; Burdukiewicz, Michal
errShare
errSave
Newly Discovered Peptides from the Coral Heliofungia actiniformis Show Structural and Functional Diversity
err2022-07-13
err6
PREAI
errSchmidt, Casey A.; Cooke, Ira; Wilson, David T.; Miller, David J.; Peigneur, Steve; Tytgat, Jan; Field, Matthew; Takjoo, Rozita; Smout, Michael J.; Loukas, Alex; Daly, Norelle L.
errShare
errSave
Cryptic diversity and spatial genetic variation in the coral Acropora tenuis and its endosymbionts across the Great Barrier Reef
err2022-07-07
err25
errOAAI
errMatias, Ambrocio Melvin A.; Popovic, Iva; Thia, Joshua A.; Cooke, Ira R.; Torda, Gergely; Lukoschek, Vimoksalehi; Bay, Line K.; Kim, Sun W.; Riginos, Cynthia
errShare
errSave
Spatially varying selection between habitats drives physiological shifts and local adaptation in a broadcast spawning coral on a remote atoll in Western Australia
err2022-04-29
err26
errOAAI
errThomas, Luke; Underwood, Jim N.; Rose, Noah H.; Fuller, Zachary L.; Richards, Zoe T.; Dugal, Laurence; Grimaldi, Camille M.; Cooke, Ira R.; Palumbi, Stephen R.; Gilmour, James P.
errShare
errSave
Biogeography, reproductive biology and phylogenetic divergence within the Fungiidae (mushroom corals)
err2021-11-01
err9
PREAI
errGrinblat, Mila; Cooke, Ira; Shlesinger, Tom; Ben-Zvi, Or; Loya, Yossi; Miller, David J.; Cowman, Peter F.
errShare
errSave
Morphological stasis masks ecologically divergent coral species on tropical reefs
err2021-06-01
err53
errOAAI
errBongaerts, Pim; Cooke, Ira R.; Ying, Hua; Wels, Dagmar; den Haan, Stijn; Hernandez-Agreda, Alejandra; Brunner, Christopher A.; Dove, Sophie; Englebert, Norbert; Eyal, Gal; Foret, Sylvain; Grinblat, Mila; Hay, Kyra B.; Harii, Saki; Hayward, David C.; Lin, Yu; Morana, Mihaljevi C.; Moya, Aurelie; Muir, Paul; Sinniger, Frederic; Smallhorn-West, Patrick; Torda, Gergely; Ragan, Mark A.; van Oppen, Madeleine J. H.; Hoegh-Guldberg, Ove
errShare
errSave