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Nathan Rollins

seismic therapeutic, watertown, massachusetts, usa

13H-index
30Paper Count
1.1KCitation Count
Published Papers 14
Publication Date
Results of the Protein Engineering Tournament: An Open Science Benchmark for Protein Modeling and Design
err2025-06-23
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errOAAI
errChase Armer; Hassan Kane; Dana L. Cortade; Henning Redestig; David A. Estell; Adil Yusuf; Nathan Rollins; Aviv Spinner; Debora Marks; T. J. Brunette; Peter J. Kelly; Erika DeBenedictis
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MaveDB 2024: a curated community database with over seven million variant effects from multiplexed functional assays
err2025-01-21
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errOAAI
errRubin, Alan F.; Stone, Jeremy; Bianchi, Aisha Haley; Capodanno, Benjamin J.; Da, Estelle Y.; Dias, Mafalda; Esposito, Daniel; Frazer, Jonathan; Fu, Yunfan; Grindstaff, Sally B.; Harrington, Matthew R.; Li, Iris; Mcewen, Abbye E.; Min, Joseph K.; Moore, Nick; Moscatelli, Olivia G.; Ong, Jesslyn; Polunina, Polina V.; Rollins, Joshua E.; Rollins, Nathan J.; Snyder, Ashley E.; Tam, Amy; Wakefield, Matthew J.; Starita, Lea M.; Bryant, Vanessa L.; Marks, Debora S.; Fowler, Douglas M.
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Preclinical pharmacology of S-1117, a novel engineered Fc-fused IgG cleaving enzyme, for chronic treatment of autoantibody-mediated diseases
err2024-05-01
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PREAI
errSanmarco, Liliana; Pellerin, Alex; Anderson, Jordan; Rollins, Nathan; Newton, Andita; Green, Tobias; Le, Nam; Peckner, Ryan; Mande, Purvi; Xing, Xi; Manasson, Julia; Higginson-Scott, Nathan; Sundy, John; Otipoby, Kevin; Mascanfroni, Ivan
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Protein design using structure-based residue preferences
err2024-02-22
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errOAAI
errDing, David; Shaw, Ada Y.; Sinai, Sam; Rollins, Nathan; Prywes, Noam; Savage, David F.; Laub, Michael T.; Marks, Debora S.
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Machine learning for functional protein design
err2024-02-15
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PREAI
errNotin, Pascal; Rollins, Nathan; Gal, Yarin; Sander, Chris; Marks, Debora
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In vitro assay development to assess successful removal of T and B cell epitopes through Seismic's IMPACT platform
err2023-05-01
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errOAAI
errNewton, Andita P.; Pellerin, Alex; Anderson, Jordan; Rollins, Nathan; Hollfelder, Melissa; Peckner, Ryan; Higginson-Scott, Nathan; Otipoby, Kevin; Mascanfroni, Ivan
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The promise of machine learning: using Seismic's IMPACT platform to design IgG cleaving enzymes for chronic treatment of autoimmune diseases
err2023-05-01
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errOAAI
errPellerin, Alex; Anderson, Jordan; Rollins, Nathan; Sanmarco, Liliana; Newton, Andita; Le, Nam; Shin, June; Hoel, Chris; Cianci, Michael; Hoyt, Emily; Mojta, Shanell; Hollfelder, Melissa; Cipoletta, Daniela; Peckner, Ryan; Higginson-Scott, Nathan; Otipoby, Kevin; Mascanfroni, Ivan
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High-Content Screening and Computational Prediction Reveal Viral Genes That Suppress the Innate Immune Response
err2022-04-26
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errOAAI
errNg, Tai L.; Olson, Erika J.; Yoo, Tae Yeon; Weiss, H. Sloane; Koide, Yukiye; Koch, Peter D.; Rollins, Nathan J.; Mach, Pia; Meisinger, Tobias; Bricken, Trenton; Chang, Timothy Z.; Molloy, Colin; Zurcher, Jerome; Chang, Roger L.; Mitchison, Timothy J.; Glass, John, I; Marks, Debora S.; Way, Jeffrey C.; Silver, Pamela A.
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Natural and Designed Proteins Inspired by Extremotolerant Organisms Can Form Condensates and Attenuate Apoptosis in Human Cells
err2022-02-18
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errOAAI
errVeling, Mike T.; Nguyen, Dan T.; Thadani, Nicole N.; Oster, Michela E.; Rollins, Nathan J.; Brock, Kelly P.; Bethel, Neville P.; Lim, Samuel; Baker, David; Way, Jeffrey C.; Marks, Debora S.; Chang, Roger L.; Silver, Pamela A.
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PDBe-KB: collaboratively defining the biological context of structural data
err2021-11-10
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errOAAI
errVaradi, Mihaly; Anyango, Stephen; Armstrong, David; Berrisford, John; Choudhary, Preeti; Deshpande, Mandar; Nadzirin, Nurul; Nair, Sreenath S.; Pravda, Lukas; Tanweer, Ahsan; Al-Lazikani, Bissan; Andreini, Claudia; Barton, Geoffrey J.; Bednar, David; Berka, Karel; Blundell, Tom; Brock, Kelly P.; Maria Carazo, Jose; Damborsky, Jiri; David, Alessia; Dey, Sucharita; Dunbrack, Roland; Fernandez Recio, Juan; Fraternali, Franca; Gibson, Toby; Helmer-Citterich, Manuela; Hoksza, David; Hopf, Thomas; Jakubec, David; Kannan, Natarajan; Krivak, Radoslav; Kumar, Manjeet; Levy, Emmanuel D.; London, Nir; Macias, Jose Ramon; Srivatsan, Madhusudhan M.; Marks, Debora S.; Martens, Lennart; McGowan, Stuart A.; McGreig, Jake E.; Modi, Vivek; Gonzalo Parra, R.; Pepe, Gerardo; Piovesan, Damiano; Prilusky, Jaime; Putignano, Valeria; Radusky, Leandro G.; Ramasamy, Pathmanaban; Rausch, Atilio O.; Reuter, Nathalie; Rodriguez, Luis A.; Rollins, Nathan J.; Rosato, Antonio; Serrano, Luis; Singh, Gulzar; Skoda, Petr; Sorzano, Carlos Oscar S.; Stourac, Jan; Sulkowska, Joanna, I; Svobodova, Radka; Tichshenko, Natalia; Tosatto, Silvio C. E.; Vranken, Wim; Wass, Mark N.; Xue, Dandan; Zaidman, Daniel; Thornton, Janet; Sternberg, Michael; Orengo, Christine; Velankar, Sameer
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Exploring targeting peptide-shell interactions in encapsulin nanocompartments
err2021-03-02
err26
errOAAI
errAltenburg, Wiggert J.; Rollins, Nathan; Silver, Pamela A.; Giessen, Tobias W.
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Multiplexed measurement of variant abundance and activity reveals VKOR topology, active site and human variant impact
err2020-09-01
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errOAAI
errChiasson, Melissa A.; Rollins, Nathan J.; Stephany, Jason J.; Sitko, Katherine A.; Matreyek, Kenneth A.; Verby, Marta; Sun, Song; Roth, Frederick P.; DeSloover, Daniel; Marks, Debora S.; Rettie, Allan E.; Fowler, Douglas M.
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Inferring protein 3D structure from deep mutation scans
err2019-06-17
err106
errOAAI
errRollins, Nathan J.; Brock, Kelly P.; Poelwijk, Frank J.; Stiffler, Michael A.; Gauthier, Nicholas P.; Sander, Chris; Marks, Debora S.
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Chimeric Fatty Acyl-Acyl Carrier Protein Thioesterases Provide Mechanistic Insight into Enzyme Specificity and Expression
err2018-05-15
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errZiesack, Marika; Rollins, Nathan; Shah, Aashna; Dusel, Brendon; Webster, Gordon; Silver, Pamela A.; Way, Jeffrey C.
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