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A

Avi I. Flamholz

The Rockefeller University

35H-index
112Paper Count
7.6KCitation Count
Published Papers 34
Publication Date
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Heterotrophic respiration by soil microbes in a changing climate
errNature Reviews Earth & Environment
IF71.5
err2026-07-10
err0
PREAI
errJanet K. Jansson; Avi I. Flamholz; Raquel Peixoto; Joana Falcao Salles; Jay T. Lennon; Alexandre Soares Rosado; Ian R. Sanders; Carsten S. Jacobsen; Thulani Makhalanyane; Christopher W. Schadt; Jack A. Gilbert
errShare
errSave
Electro-microbial production techno-economic viability and environmental implications
errNATURE BIOTECHNOLOGY
IF41.7
err2025-04-22
err0
PREAI
errLovat, Samuel J.; Ben-Nissan, Roee; Milshtein, Eliya; Tzachor, Asaf; Flamholz, Avi; Leger, Dorian; Noor, Elad
errShare
errSave
US grass- fed beef is as carbon intensive as industrial beef and N10-fold more intensive than common protein- dense alternatives
errPROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
IF9.1
err2025-03-17
err0
errOAAI
errEshel, Gidon; Flamholz, Avi I.; Shepon, Alon Alon
errShare
errSave
The proteome is a terminal electron acceptor
errPROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
IF9.1
err2025-01-03
err0
errOAAI
errFlamholz, Avi, I; Fischer, Woodward W.; Newman, Dianne K.; Phillips, Rob
errShare
errSave
Annotation-free prediction of microbial dioxygen utilization
errMSYSTEMS
IF4.6
err2024-10-22
err1
errOAAI
errFlamholz, Avi I.; Goldford, Joshua E.; Richter, Philippa A.; Larsson, Elin M.; Jinich, Adrian; Fischer, Woodward W.; Newman, Dianne K.
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errSave
Closed ecosystems extract energy through self-organized nutrient cycles
errPROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
IF9.1
err2023-12-21
err3
errOAAI
errGoyal, Akshit; Flamholz, Avi I.; Petroff, Alexander P.; Murugan, Arvind
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errSave
Matching metabolic supply to demand optimizes microbial growth
errTRENDS IN MICROBIOLOGY
IF14.9
err2023-08-01
err0
PREAI
errFlamholz, Avi I.; Goyal, Akshit
errShare
errSave
Carbon isotope fractionation by an ancestral rubisco suggests that biological proxies for CO2 through geologic time should be reevaluated
errPROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
IF9.1
err2023-05-08
err4
errOAAI
errWang, Renee Z.; Nichols, Robert J.; Liu, Albert K.; Flamholz, Avi I.; Artier, Juliana; Banda, Doug M.; Savage, David F.; Eiler, John M.; Shih, Patrick M.; Fischer, Woodward W.
errShare
errSave
Competing constraints shape the nonequilibrium limits of cellular decision-making
errPROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
IF9.1
err2023-03-02
err5
errOAAI
errLammers, Nicholas C.; Flamholz, Avi I.; Garcia, Hernan G.
errShare
errSave
Optical O2 Sensors Also Respond to Redox Active Molecules Commonly Secreted by Bacteria
errMBIO
IF4.7
err2022-12-20
err7
errOAAI
errFlamholz, Avi, I; Saccomano, Samuel; Cash, Kevin; Newman, Dianne K.
errShare
errSave
Anthroponumbers.org: A quantitative database of human impacts on Planet Earth
errPATTERNS
IF7.4
err2022-09-01
err0
errOAAI
errChure, Griffin; Blanks, Rachel A.; Flambolz, Avi I.; Sarai, Nicholas S.; Kamb, Mason; Lopez-Gomez, Ignacio; Bar-On, Yinon; Milo, Ron; Phillips, Rob
errShare
errSave
Protein cost minimization promotes the emergence of coenzyme redundancy
errPROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
IF9.1
err2022-03-28
err6
errOAAI
errGoldford, Joshua E.; George, Ashish B.; Flamholz, Avi I.; Segre, Daniel
errShare
errSave
eQuilibrator 3.0: a database solution for thermodynamic constant estimation
errNUCLEIC ACIDS RESEARCH
IF13.1
err2021-11-29
err85
errOAAI
errBeber, Moritz E.; Gollub, Mattia G.; Mozaffari, Dana; Shebek, Kevin M.; Flamholz, Avi, I; Milo, Ron; Noor, Elad
errShare
errSave
Tools for interpretation of wastewater SARS-CoV-2 temporal and spatial trends demonstrated with data collected in the San Francisco Bay Area
errwater research
IF8.2
err2021-08-01
err80
errOAAI
errGreenwald, Hannah D.; Kennedy, Lauren C.; Hinkle, Adrian; Whitney, Oscar N.; Fan, Vinson B.; Crits-Christoph, Alexander; Harris-Lovett, Sasha; Flamholz, Avi, I; Al-Shayeb, Basem; Liao, Lauren D.; Beyers, Matt; Brown, Daniel; Chakrabarti, Alicia R.; Dow, Jason; Frost, Dan; Koekemoer, Mark; Lynch, Chris; Sarkar, Payal; White, Eileen; Kantor, Rose; Nelson, Kara L.
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errSave
The total number and mass of SARS-CoV-2 virions
errPROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
IF9.1
err2021-06-03
err179
errOAAI
errSender, Ron; Bar-On, Yinon M.; Gleizer, Shmuel; Bernshtein, Biana; Flamholz, Avi; Phillips, Rob; Milo, Ron
errShare
errSave
Genome Sequencing of Sewage Detects Regionally Prevalent SARS-CoV-2 Variants
errMBIO
IF4.7
err2021-02-23
err244
errOAAI
errCrits-Christoph, Alexander; Kantor, Rose S.; Olm, Matthew R.; Whitney, Oscar N.; Al-Shayeb, Basem; Lou, Yue Clare; Flamholz, Avi; Kennedy, Lauren C.; Greenwald, Hannah; Hinkle, Adrian; Hetzel, Jonathan; Spitzer, Sara; Koble, Jeffery; Tan, Asako; Hyde, Fred; Schroth, Gary; Kuersten, Scott; Banfield, Jillian F.; Nelson, Kara L.
errShare
errSave
Functional reconstitution of a bacterial CO2 concentrating mechanism in Escherichia coli
errELIFE
IF0
err2020-10-21
err77
errOAAI
errFlamholz, Avi, I; Dugan, Eli; Blikstad, Cecilia; Gleizer, Shmuel; Ben-Nissan, Roee; Amram, Shira; Antonovsky, Niv; Ravishankar, Sumedha; Noor, Elad; Bar-Even, Arren; Milo, Ron; Savage, David F.
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errSave
Phosphoglycolate salvage in a chemolithoautotroph using the Calvin cycle
errPROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
IF9.1
err2020-08-20
err32
errOAAI
errClaassens, Nico J.; Scarinci, Giovanni; Fischer, Axel; Flamholz, Avi I.; Newell, William; Frielingsdorf, Stefan; Lenz, Oliver; Bar-Even, Arren
errShare
errSave
Highly active rubiscos discovered by systematic interrogation of natural sequence diversity
errEMBO JOURNAL
IF8.3
err2020-06-05
err66
errOAAI
errDavidi, Dan; Shamshoum, Melina; Guo, Zhijun; Bar-On, Yinon M.; Prywes, Noam; Oz, Aia; Jablonska, Jagoda; Flamholz, Avi; Wernick, David G.; Antonovsky, Niv; de Pins, Benoit; Shachar, Lior; Hochhauser, Dina; Peleg, Yoav; Albeck, Shira; Sharon, Itai; Mueller-Cajar, Oliver; Milo, Ron
errShare
errSave
SARS-CoV-2 (COVID-19) by the numbers
errELIFE
IF0
err2020-04-02
err777
errOAAI
errBar-On, Yinon M.; Flamholz, Avi; Phillips, Rob; Milo, Ron
errShare
errSave

Research Directions

No research directions
Co-authors
Cooperation Journals
J
Jillian F. Banfield
H-index: 154 · Papers: 935
J
Jennifer A. Doudna
H-index: 149 · Papers: 672
E
Eileen White
H-index: 110 · Papers: 584
J
Janet Jansson
H-index: 98 · Papers: 1.3W
J
John M. Eiler
H-index: 89 · Papers: 659
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