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J

John E. Carlson

pennsylvania state university

52H-index
316Paper Count
1.6WCitation Count
Published Papers 62
Publication Date
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Genomic approaches to accelerate American chestnut restoration
errScience
IF45.8
err2026-02-12
err0
PREAI
errJared W. Westbrook; Joanna Malukiewicz; Qian Zhang; Avinash Sreedasyam; Jerry W. Jenkins; Vasiliy Lakoba; Sara Fitzsimmons; Jamie Van Clief; Kendra Collins; Stephen Hoy; Cassie Stark; Lake Graboski; Eric Jenkins; Thomas M. Saielli; Benjamin T. Jarrett; Lucinda J. Wigfield; Lauren M. Kerwien; Ciera Wilbur; Alexander M. Sandercock; J. Hill Craddock; Susanna Keriö; Tetyana Zhebentyayeva; Shenghua Fan; Austin M. Thomas; Albert G. Abbott; C. Dana Nelson; Xiaoxia Xia; James R. McKenna; Caleb Kell; Melissa Williams; LoriBeth Boston; Christopher Plott; Florian Carle; Jack Swatt; Jack Ostroff; Steven N. Jeffers; Kathleen McKeever; Erica Smith; Thomas J. Ellis; Joseph B. James; Paul Sisco; Andrew Newhouse; Erik Carlson; William A. Powell; Frederick V. Hebard; John Scrivani; Caragh Heverly; Martin Cipollini; Brian Clark; Eric Evans; Bruce Levine; John E. Carlson; David Goodstein; Jack Orebaugh; Zamin K. Yang; Madhavi Z. Martin; Joanna Tannous; Tomás A. Rush; Nancy L. Engle; Timothy J. Tschaplinski; Jane Grimwood; Jeremy Schmutz; Jason A. Holliday; John T. Lovell
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errSave
Bacterial Assembly in the Switchgrass Rhizosphere Is Shaped by Phylogeny, Host Genotype, and Growing Site
errPHYTOBIOMES JOURNAL
IF2.6
err2025-09-01
err2
PREAI
errSutherland, Jeremy; Bell, Terrence H.; Bonos, Stacy; Tkach, Christopher; Hansen, Julie; Crawford, Ryan; Carlson, John E.; Lasky, Jesse R.
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errSave
Direct imaging of active galactic nucleus outflows and their origin with the 23 m Large Binocular Telescope
errNATURE ASTRONOMY
IF14.3
err2025-01-17
err1
PREAI
errIsbell, J. W.; Ertel, S.; Pott, J. -u.; Weigelt, G.; Stalevski, M.; Leftley, J.; Jaffe, W.; Petrov, R. G.; Moszczynski, N.; Vermot, P.; Hinz, P.; Burtscher, L.; Rosas, V. Gamez; Becker, A.; Carlson, J.; Faramaz-Gorka, V.; Hoffmann, W. F.; Leisenring, J.; Power, J.; Wagner, K.
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errSave
Insect Allergy: Barriers in Training and Practice-A Work Group Report of the AAAAI Anaphylaxis Committee
errJOURNAL OF ALLERGY AND CLINICAL IMMUNOLOGY-IN PRACTICE
IF6.6
err2025-01-01
err0
PREAI
errAdams, Karla; Greenhawt, Matthew; Bingemann, Theresa; Tracy, James; Brooks, Joel; Otto, Hans; Steigelman, Daniel; Hsieh, Yvonne; Anagnostou, Aikaterini; Carlson, John; Demain, Jeffrey; Harish, Aasha; Hein, Nina; Nanda, Anil; Hajirawala, Monica; Waserman, Susan; Golden, David B. K.
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Editorial: Deciphering mechanisms of plant adaptation and resistance under cold temperature stress
errFRONTIERS IN PLANT SCIENCE
IF4.8
err2024-08-19
err0
errOAAI
errShah, Sabir Hussain; Carlson, John E.; Niklas, Karl J.; Benavides-Mendoza, Adalberto; Ricachenevsky, Felipe Klein
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errSave
Integrated analysis of miRNAome transcriptome and degradome reveals miRNA-target modules governing floral florescence development and senescence across early- and late-flowering genotypes in tree peony
errFRONTIERS IN PLANT SCIENCE
IF4.8
err2022-12-14
err5
errOAAI
errGuo, Lili; Li, Yuying; Zhang, Chenjie; Wang, Zhanying; Carlson, John E.; Yin, Weinlun; Zhang, Xiuxin; Hou, Xiaogai
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errSave
Genome-wide association study of 23 flowering phenology traits and 4 floral agronomic traits in tree peony (Paeonia section Moutan DC.) reveals five genes known to regulate flowering time
errHORTICULTURE RESEARCH
IF8.5
err2022-12-02
err15
errOAAI
errLi, Yuying; Guo, Lili; Wang, Zhanying; Zhao, Dehui; Guo, Dalong; Carlson, John E. E.; Yin, Weilun; Hou, Xiaogai
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errSave
A high-quality reference genome for Fraxinus pennsylvanica for ash species restoration and research
errMOLECULAR ECOLOGY RESOURCES
IF5.5
err2021-11-27
err21
errOAAI
errHuff, Matt; Seaman, Josiah; Di, Wu; Zhebentyayeva, Tetyana; Kelly, Laura J.; Faridi, Nurul; Nelson, Charles D.; Cooper, Endymion; Best, Teodora; Steiner, Kim; Koch, Jennifer; Severson, Jeanne Romero; Carlson, John E.; Buggs, Richard; Staton, Margaret
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errSave
Phylogenetic analysis based on chloroplast genome uncover evolutionary relationship of all the nine species and six cultivars of tree peony (vol 153, 112567, 2020)
errINDUSTRIAL CROPS AND PRODUCTS
IF6.2
err2020-10-01
err0
PREAI
errGuo, Lili; Guo, Shuai; Xu, Jiang; He, Lixia; Carlson, John E.; Hou, Xiaogai
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errSave
Phylogenetic analysis based on chloroplast genome uncover evolutionary relationship of all the nine species and six cultivars of tree peony
errINDUSTRIAL CROPS AND PRODUCTS
IF6.2
err2020-10-01
err36
errOAAI
errGuo, Lili; Guo, Shuai; Xu, Jiang; He, Lixia; Carlson, John E.; Hou, Xiaogai
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errSave
Transcriptome profiles of Quercus rubra responding to increased O3 stress
errBMC GENOMICS
IF3.7
err2020-02-14
err12
errOAAI
errSoltani, Nourolah; Best, Teo; Grace, Dantria; Nelms, Christen; Shumaker, Ketia; Romero-Severson, Jeanne; Moses, Daniela; Schuster, Stephan; Staton, Margaret; Carlson, John; Gwinn, Kimberly
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errSave
Factoring Ecological, Societal, and Economic Considerations into Inoculant Development
errTRENDS IN BIOTECHNOLOGY
IF14.9
err2019-06-01
err13
PREAI
errBell, Terrence H.; Kaminsky, Laura M.; Gugino, Beth K.; Carlson, John E.; Malik, Rondy J.; Hockett, Kevin L.; Trexler, Ryan V.
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errSave
The first genetic linkage map for Fraxinus pennsylvanica and syntenic relationships with four related species
errPLANT MOLECULAR BIOLOGY
IF3.8
err2019-01-02
err10
PREAI
errWu, Di; Koch, Jennifer; Coggeshall, Mark; Carlson, John
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errSave
Manipulating Wild and Tamed Phlytobiomes: Challenges and Opportunities
errPHYTOBIOMES JOURNAL
IF2.6
err2019-01-01
err32
errOAAI
errBell, Terrence H.; Hockett, Kevin L.; Alcala-Briseno, Ricardo I.; Barbercheck, Mary; Beattie, Gwyn A.; Bruns, Mary Ann; Carlson, John E.; Chung, Taejung; Collins, Alyssa; Emmett, Bryan; Esker, Paul; Garrett, Karen A.; Glenna, Leland; Gugino, Beth K.; del Mar Jimenez-Gasco, Maria; Kinkel, Linda; Kovac, Jasna; Kowalski, Kurt P.; Kuldau, Gretchen; Leveau, Johan H. J.; Michalska-Smith, Matthew J.; Myrick, Jessica; Peter, Kari; Salazar, Maria Fernanda Vivanco; Shade, Ashley; Stopnisek, Nejc; Tan, Xiaoqing; Welty, Amy T.; Wickings, Kyle; Yergeau, Etienne
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errSave
Hardwood Tree Genomics: Unlocking Woody Plant Biology
errFRONTIERS IN PLANT SCIENCE
IF4.8
err2018-12-17
err29
errOAAI
errTuskan, Gerald A.; Groover, Andrew T.; Schmutz, Jeremy; DiFazio, Stephen Paul; Myburg, Alexander; Grattapaglia, Dario; Smart, Lawrence B.; Yin, Tongming; Aury, Jean-Marc; Kremer, Antoine; Leroy, Thibault; Le Provost, Gregoire; Plomion, Christophe; Carlson, John E.; Randall, Jennifer; Westbrook, Jared; Grimwood, Jane; Muchero, Wellington; Jacobson, Daniel; Michener, Joshua K.
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errSave
Host-plant induced changes in microbial community structure and midgut gene expression in an invasive polyphage (Anoplophora glabripennis)
errSCIENTIFIC REPORTS
IF3.9
err2018-06-25
err28
errOAAI
errScully, Erin D.; Geib, Scott M.; Mason, Charles J.; Carlson, John E.; Tien, Ming; Chen, Han-Yi; Harding, Scott; Tsai, Chung-Jui; Hoover, Kelli
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errSave
Genome-wide association study identifies a major gene for beech bark disease resistance in American beech (Fagus grandifolia Ehrh.)
errBMC GENOMICS
IF3.7
err2017-07-20
err24
errOAAI
errCalic, Irina; Koch, Jennifer; Carey, David; Addo-Quaye, Charles; Carlson, John E.; Neale, David B.
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errSave
High-quality genetic mapping with ddRADseq in the non-model tree Quercus rubra
errBMC GENOMICS
IF3.7
err2017-05-30
err34
errOAAI
errKonar, Arpita; Choudhury, Olivia; Bullis, Rebecca; Fiedler, Lauren; Kruser, Jacqueline M.; Stephens, Melissa T.; Gailing, Oliver; Schlarbaum, Scott; Coggeshall, Mark V.; Staton, Margaret E.; Carlson, John E.; Emrich, Scott; Romero-Severson, Jeanne
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errSave
The green ash transcriptome and identification of genes responding to abiotic and biotic stresses
errBMC GENOMICS
IF3.7
err2016-09-02
err34
errOAAI
errLane, Thomas; Best, Teodora; Zembower, Nicole; Davitt, Jack; Henry, Nathan; Xu, Yi; Koch, Jennifer; Liang, Haiying; McGraw, John; Schuster, Stephan; Shim, Donghwan; Coggeshall, Mark V.; Carlson, John E.; Staton, Margaret E.
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errSave
Substantial genome synteny preservation among woody angiosperm species: comparative genomics of Chinese chestnut (Castanea mollissima) and plant reference genomes
errBMC GENOMICS
IF3.7
err2015-10-05
err38
errOAAI
errStaton, Margaret; Zhebentyayeva, Tetyana; Olukolu, Bode; Fang, Guang Chen; Nelson, Dana; Carlson, John E.; Abbott, Albert G.
errShare
errSave

Research Directions

No research directions
Co-authors
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Andrew H. Paterson
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