Meenakshi S. Kagda - Publications, H-index & Citations

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Meenakshi S. Kagda

Stanford University

14H-index

29Paper Count

1.8KCitation Count

Published Papers 9

Publication Date

The IGVF catalog-from genetic variation to function

NUCLEIC ACIDS RESEARCH

IF13.1

2025-12-01

PREAI

Li, Daofeng; Liu, Shane; Assis, Pedro R.; Li, Mingjie; Dong, Shengcheng; Whaling, Ian; Jolanki, Otto; Kagda, Meenakshi; Zhang, Wenjin; Macias-Velasco, Juan F.; Liu, Tianjie; Cody, Sarah; Antonacci-Fulton, Lucinda; Huang, Yuanhao; Liu, Jie; Montgomery, Michael T.; Zeiberg, Daniel; Jain, Shantanu; Pejaver, Vikas; Bergquist, Timothy; Chen, Yile; Radivojac, Predrag; Gersbach, Charles A.; Sherpa, Rintsen N.; Castro, Christopher P.; Boyle, Alan P.; Starita, Lea M.; Fowler, Douglas M.; Ahituv, Nadav; Dey, Kushal K.; Majoros, William H.; Reddy, Timothy E.; Craven, Mark; Sinha, Riya; Sverchkov, Yuriy; Cai, Xiangmeng; Nzima, Mpathi Z.; Calderwood, Michael A.; Rozowsky, Joel; Gerstein, Mark; Ma, Jian; Yue, Feng; Cherry, J. Michael; Love, Michael, I; Engreitz, Jesse M.; Hitz, Benjamin C.; Wang, Ting

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Data navigation on the ENCODE portal

Nature Communications

IF15.7

2025-10-30

OAAI

Meenakshi S. Kagda; Bonita Lam; Casey Litton; Corinn Small; Cricket A. Sloan; Emma Spragins; Forrest Tanaka; Ian Whaling; Idan Gabdank; Ingrid Youngworth; J. Seth Strattan; Jason Hilton; Jennifer Jou; Jessica Au; Jin-Wook Lee; Kalina Andreeva; Keenan Graham; Khine Lin; Matt Simison; Otto Jolanki; Paul Sud; Pedro Assis; Philip Adenekan; Stuart Miyasato; Weiwei Zhong; Yunhai Luo; Zachary Myers; J. Michael Cherry; Benjamin C. Hitz

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Exploring virus presence in field-collected potato leaf samples using RNA sequencing

JOURNAL OF GENETIC ENGINEERING AND BIOTECHNOLOGY

IF2.8

2023-12-01

OAAI

Elwan, Esraa A.; Rabie, Mona; Aleem, Engy E. Abdel; Fattouh, Faiza A.; Kagda, Meenakshi S.; Zaghloul, Heba A. H.

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Annotating and prioritizing human non-coding variants with RegulomeDB v.2

NATURE GENETICS

IF31.8

2023-04-25

OAAI

Dong, Shengcheng; Zhao, Nanxiang; Spragins, Emma; Kagda, Meenakshi S.; Li, Mingjie; Assis, Pedro; Jolanki, Otto; Luo, Yunhai; Cherry, J. Michael; Boyle, Alan P.; Hitz, Benjamin C.

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Transcriptomic Evidence That Switching from Tobacco to Electronic Cigarettes Does Not Reverse Damage to the Respiratory Epithelium

TOXICS

IF4.1

2022-07-04

OAAI

Pozuelos, Giovanna L.; Kagda, Meenakshi; Rubin, Matine A.; Goniewicz, Maciej L.; Girke, Thomas; Talbot, Prue

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Invertases in Phytophthora infestans Localize to Haustoria and Are Programmed for Infection-Specific Expression

MBIO

IF4.7

2020-10-27

OAAI

Kagda, Meenakshi S.; Martinez-Soto, Domingo; Ah-Fong, Audrey M., V; Judelson, Howard S.

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New developments on the Encyclopedia of DNA Elements (ENCODE) data portal

NUCLEIC ACIDS RESEARCH

IF13.1

2019-11-12

422

OAAI

Luo, Yunhai; Hitz, Benjamin C.; Gabdank, Idan; Hilton, Jason A.; Kagda, Meenakshi S.; Lam, Bonita; Myers, Zachary; Sud, Paul; Jou, Jennifer; Lin, Khine; Baymuradov, Ulugbek K.; Graham, Keenan; Litton, Casey; Miyasato, Stuart R.; Strattan, J. Seth; Jolanki, Otto; Lee, Jin-Wook; Tanaka, Forrest Y.; Adenekan, Philip; O'Neill, Emma; Cherry, J. Michael

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Niche-specific metabolic adaptation in biotrophic and necrotrophic oomycetes is manifested in differential use of nutrients, variation in gene content, and enzyme evolution

PLOS PATHOGENS

IF4.9

2019-04-19

OAAI

Ah-Fong, Audrey M., V; Kagda, Meenakshi S.; Abrahamian, Melanie; Judelson, Howard S.

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Genome-wide Prediction and Functional Validation of Promoter Motifs Regulating Gene Expression in Spore and Infection Stages of Phytophthora infestans

PLOS PATHOGENS

IF4.9

2013-03-14

OAAI

Roy, Sourav; Kagda, Meenakshi; Judelson, Howard S.

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Research Directions