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Resident Kupffer cells and neutrophils drive liver toxicity in cancer immunotherapy Siwicki, Marie; Gort-Freitas, Nicolas A.; Messemaker, Marius; Bill, Ruben; Gungabeesoon, Jeremy; Engblom, Camilla; Zilionis, Rapolas; Garris, Christopher; Gerhard, Genevieve M.; Kohl, Anna; Lin, Yunkang; Zou, Angela E.; Cianciaruso, Chiara; Bolli, Evangelia; Pfirschke, Christina; Lin, Yi-Jang; Piot, Cecile; Mindur, John E.; Talele, Nilesh; Kohler, Rainer H.; Iwamoto, Yoshiko; Mino-Kenudson, Mari; Pai, Sara, I; DeVito, Claudio; Koessler, Thibaud; Merkler, Doron; Coukos, Alexander; Wicky, Alexandre; Fraga, Montserrat; Sempoux, Christine; Jain, Rakesh K.; Dietrich, Pierre-Yves; Michielin, Olivier; Weissleder, Ralph; Klein, Allon M.; Pittet, Mikael J. Share Save
Identification of a targetable KRAS-mutant epithelial population in non-small cell lung cancer Maroni, Giorgia; Bassal, Mahmoud A.; Krishnan, Indira; Fhu, Chee Wai; Savova, Virginia; Zilionis, Rapolas; Maymi, Valerie A.; Pandell, Nicole; Csizmadia, Eva; Zhang, Junyan; Storti, Barbara; Castano, Julio; Panella, Riccardo; Li, Jia; Gustafson, Corinne E.; Fox, Sam; Levy, Rachel D.; Meyerovitz, Claire, V; Tramontozzi, Peter J.; Vermilya, Kimberly; De Rienzo, Assunta; Crucitta, Stefania; Basseres, Daniela S.; Weetall, Marla; Branstrom, Art; Giorgetti, Alessandra; Ciampi, Raffaele; Del Re, Marzia; Danesi, Romano; Bizzarri, Ranieri; Yang, Henry; Kocher, Olivier; Klein, Allon M.; Welner, Robert S.; Bueno, Raphael; Magli, Maria Cristina; Clohessy, John G.; Ali, Azhar; Tenen, Daniel G.; Levantini, Elena Share Save
Tumor-Promoting Ly-6G+ SiglecFhigh Cells Are Mature and Long-Lived Neutrophils Pfirschke, Christina; Engblom, Camilla; Gungabeesoon, Jeremy; Lin, Yunkang; Rickelt, Steffen; Zilionis, Rapolas; Messemaker, Marius; Siwicki, Marie; Gerhard, Genevieve M.; Kohl, Anna; Meylan, Etienne; Weissleder, Ralph; Klein, Allon M.; Pittet, Mikael J. Share Save
A large pool of actively cycling progenitors orchestrates self-renewal and injury repair of an ectodermal appendage Sharir, Amnon; Marangoni, Pauline; Zilionis, Rapolas; Wan, Mian; Wald, Tomas; Hu, Jimmy K.; Kawaguchi, Kyogo; Castillo-Azofeifa, David; Epstein, Leo; Harrington, Kyle; Pagella, Pierfrancesco; Mitsiadis, Thimios; Siebel, Christian W.; Klein, Allon M.; Klein, Ophir D. Share Save
Single-Cell Transcriptomics of Human and Mouse Lung Cancers Reveals Conserved Myeloid Populations across Individuals and Species Zilionis, Rapolas; Engblom, Camilla; Pfirschke, Christina; Savova, Virginia; Zemmour, David; Saatcioglu, Hatice D.; Krishnan, Indira; Maroni, Giorgia; Meyerovitz, Claire V.; Kerwin, Clara M.; Choi, Sun; Richards, William G.; De Rienzo, Assunta; Tenen, Daniel G.; Bueno, Raphael; Levantini, Elena; Pittet, Mikael J.; Klein, Allon M. Share Save
Quantitative Clonal Analysis and Single-Cell Transcriptomics Reveal Division Kinetics, Hierarchy, and Fate of Oral Epithelial Progenitor Cells Jones, Kyle B.; Furukawa, Sachiko; Marangoni, Pauline; Ma, Hongfang; Pinkard, Henry; D'Urso, Rebecca; Zilionis, Rapolas; Klein, Allon M.; Klein, Ophir D. Share Save
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Novel anti-BMI-1 therapy in non-small cell lung cancer Krishnan, Indira; Maroni, Giorgia; Clohessy, Sean; Savova, Virginia; Bassal, Mahmoud; Zilionis, Rapolas; Csizmadia, Eva; Kerwin, Clara M.; Choi, Sun; Meyerovitz, Claire V.; Pandell, Nicole; Fhu, Chee W.; Zhang, Junyan; Basseres, Daniela S.; Magli, Cristina M.; Goggi, Julian; Welner, Robert S.; Klein, Allon M.; Weetall, Marla; Branstrom, Art; Bueno, Raphael; Ali, Azhar; Tenen, Daniel G.; Levantini, Elena Share Save
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End Sequence Analysis Toolkit (ESAT) expands the extractable information from single-cell RNA-seq data Derr, Alan; Yang, Chaoxing; Zilionis, Rapolas; Sergushichev, Alexey; Blodgett, David M.; Redick, Sambra; Bortell, Rita; Luban, Jeremy; Harlan, David M.; Kadener, Sebastian; Greiner, Dale L.; Klein, Allon; Artyomov, Maxim N.; Garber, Manuel Share Save
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