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Eleftherios Garyfallidis

Indiana University

27H-index
133Paper Count
6.3KCitation Count
Published Papers 20
Publication Date
BundleWarp: Enhancing white matter tractometry and morphometry with precise neuronal mapping using streamline-based nonlinear registration
err2026-04-28
err0
PREAI
errBramsh Qamar Chandio; Emanuele Olivetti; David Romero-Bascones; Sophia I. Thomopoulos; Julio E. Villalon-Reina; Talia M. Nir; Jaroslaw Harezlak; Paul M. Thompson; Eleftherios Garyfallidis
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Spatially regularized super-resolved constrained spherical deconvolution (SR 2-CSD) of diffusion MRI data
err2025-12-16
err0
errOAAI
errEkin Taskin; Gabriel Girard; Juan Luis Villarreal Haro; Jonathan Rafael-Patiño; Eleftherios Garyfallidis; Jean-Philippe Thiran; Erick Jorge Canales-Rodríguez
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Multi-view fusion of diffusion MRI microstructural models: a preterm birth study
err2024-12-20
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errOAAI
errTro, Rosella; Roascio, Monica; Tortora, Domenico; Severino, Mariasavina; Rossi, Andrea; Garyfallidis, Eleftherios; Arnulfo, Gabriele; Fato, Marco Massimo; Fadnavis, Shreyas
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brainlife.io: a decentralized and open-source cloud platform to support neuroscience research (Apr, 10.1038/s41592-024-02237-2, 2024)
err2024-05-07
err0
errOAAI
errHayashi, Soichi; Caron, Bradley A.; Heinsfeld, Anibal Solon; Vinci-Booher, Sophia; Mcpherson, Brent; Bullock, Daniel N.; Berto, Giulia; Niso, Guiomar; Hanekamp, Sandra; Levitas, Daniel; Ray, Kimberly; Mackenzie, Anne; Avesani, Paolo; Kitchell, Lindsey; Leong, Josiah K.; Nascimento-Silva, Filipi; Koudoro, Serge; Willis, Hanna; Jolly, Jasleen K.; Pisner, Derek; Zuidema, Taylor R.; Kurzawski, Jan W.; Mikellidou, Kyriaki; Bussalb, Aurore; Chaumon, Maximilien; George, Nathalie; Rorden, Christopher; Victory, Conner; Bhatia, Dheeraj; Aydogan, Dogu Baran; Yeh, Fang-Cheng F.; Delogu, Franco; Guaje, Javier; Veraart, Jelle; Fischer, Jeremy; Faskowitz, Joshua; Fabrega, Ricardo; Hunt, David; Mckee, Shawn; Brown, Shawn T.; Heyman, Stephanie; Iacovella, Vittorio; Mejia, Amanda F.; Marinazzo, Daniele; Craddock, R. Cameron; Olivetti, Emanuale; Hanson, Jamie L.; Garyfallidis, Eleftherios; Stanzione, Dan; Carson, James; Henschel, Robert; Hancock, David Y.; Stewart, Craig A.; Schnyer, David; Eke, Damian O.; Poldrack, Russell A.; Bollmann's, Steffen; Stewart, Ashley; Bridge, Holly; Sani, Ilaria; Freiwald, Winrich A.; Puce, Aina; Port, Nicholas L.; Pestilli, Franco
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brainlife.io: a decentralized and open-source cloud platform to support neuroscience research
err2024-04-11
err7
errOAAI
errHayashi, Soichi; Caron, Bradley A.; Heinsfeld, Anibal Solon; Vinci-Booher, Sophia; Mcpherson, Brent; Bullock, Daniel N.; Berto, Giulia; Niso, Guiomar; Hanekamp, Sandra; Levitas, Daniel; Ray, Kimberly; Mackenzie, Anne; Avesani, Paolo; Kitchell, Lindsey; Leong, Josiah K.; Nascimento-Silva, Filipi; Koudoro, Serge; Willis, Hanna; Jolly, Jasleen K.; Pisner, Derek; Zuidema, Taylor R.; Kurzawski, Jan W.; Mikellidou, Kyriaki; Bussalb, Aurore; Chaumon, Maximilien; George, Nathalie; Rorden, Christopher; Victory, Conner; Bhatia, Dheeraj; Aydogan, Dogu Baran; Yeh, Fang-Cheng F.; Delogu, Franco; Guaje, Javier; Veraart, Jelle; Fischer, Jeremy; Faskowitz, Joshua; Fabrega, Ricardo; Hunt, David; Mckee, Shawn; Brown, Shawn T.; Heyman, Stephanie; Iacovella, Vittorio; Mejia, Amanda F.; Marinazzo, Daniele; Craddock, R. Cameron; Olivetti, Emanuale; Hanson, Jamie L.; Garyfallidis, Eleftherios; Stanzione, Dan; Carson, James; Henschel, Robert; Hancock, David Y.; Stewart, Craig A.; Schnyer, David; Eke, Damian O.; Poldrack, Russell A.; Bollman, Steffen; Stewart, Ashley; Bridge, Holly; Sani, Ilaria; Freiwald, Winrich A.; Puce, Aina; Port, Nicholas L.; Pestilli, Franco
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Multi-scale V-net architecture with deep feature CRF layers for brain extraction
err2024-02-23
err2
errOAAI
errPark, Jong Sung; Fadnavis, Shreyas; Garyfallidis, Eleftherios
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Learning white matter subject-specific segmentation from structural MRI
err2022-02-07
err8
errOAAI
errYang, Qi; Hansen, Colin B.; Cai, Leon Y.; Rheault, Francois; Lee, Ho Hin; Bao, Shunxing; Chandio, Bramsh Qamar; Williams, Owen; Resnick, Susan M.; Garyfallidis, Eleftherios; Anderson, Adam W.; Descoteaux, Maxime; Schilling, Kurt G.; Landman, Bennett A.
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Bifurcated Topological Optimization for IVIM
err2021-12-15
err3
errOAAI
errFadnavis, Shreyas; Endres, Stefan; Wen, Qiuting; Wu, Yu-Chien; Cheng, Hu; Koudoro, Serge; Rane, Swati; Rokem, Ariel; Garyfallidis, Eleftherios
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MASiVar: Multisite, multiscanner, and multisubject acquisitions for studying variability in diffusion weighted MRI
err2021-07-16
err20
errOAAI
errCai, Leon Y.; Yang, Qi; Kanakaraj, Praitayini; Nath, Vishwesh; Newton, Allen T.; Edmonson, Heidi A.; Luci, Jeffrey; Conrad, Benjamin N.; Price, Gavin R.; Hansen, Colin B.; Kerley, Cailey, I; Ramadass, Karthik; Yeh, Fang-Cheng; Kang, Hakmook; Garyfallidis, Eleftherios; Descoteaux, Maxime; Rheault, Francois; Schilling, Kurt G.; Landman, Bennett A.
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QSIPrep: an integrative platform for preprocessing and reconstructing diffusion MRI data
err2021-06-21
err112
errOAAI
errCieslak, Matthew; Cook, Philip A.; He, Xiaosong; Yeh, Fang-Cheng; Dhollander, Thijs; Adebimpe, Azeez; Aguirre, Geoffrey K.; Bassett, Danielle S.; Betzel, Richard F.; Bourque, Josiane; Cabral, Laura M.; Davatzikos, Christos; Detre, John A.; Earl, Eric; Elliott, Mark A.; Fadnavis, Shreyas; Fair, Damien A.; Foran, Will; Fotiadis, Panagiotis; Garyfallidis, Eleftherios; Giesbrecht, Barry; Gur, Ruben C.; Gur, Raquel E.; Kelz, Max B.; Keshavan, Anisha; Larsen, Bart S.; Luna, Beatriz; Mackey, Allyson P.; Milham, Michael P.; Oathes, Desmond J.; Perrone, Anders; Pines, Adam R.; Roalf, David R.; Richie-Halford, Adam; Rokem, Ariel; Sydnor, Valerie J.; Tapera, Tinashe M.; Tooley, Ursula A.; Vettel, Jean M.; Yeatman, Jason D.; Grafton, Scott T.; Satterthwaite, Theodore D.
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Bundle analytics, a computational framework for investigating the shapes and profiles of brain pathways across populations
err2020-10-13
err70
errOAAI
errChandio, Bramsh Qamar; Risacher, Shannon Leigh; Pestilli, Franco; Bullock, Daniel; Yeh, Fang-Cheng; Koudoro, Serge; Rokem, Ariel; Harezlak, Jaroslaw; Garyfallidis, Eleftherios
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The challenge of mapping the human connectome based on diffusion tractography (vol 8, 1349, 2017)
err2019-11-04
err4
errOAAI
errMaier-Hein, Klaus H.; Neher, Peter F.; Houde, Jean-Christophe; Cote, Marc-Alexandre; Garyfallidis, Eleftherios; Zhong, Jidan; Chamberland, Maxime; Yeh, Fang-Cheng; Lin, Ying-Chia; Ji, Qing; Reddick, Wilburn E.; Glass, John O.; Chen, David Qixiang; Feng, Yuanjing; Gao, Chengfeng; Wu, Ye; Ma, Jieyan; He, Renjie; Li, Qiang; Westin, Carl-Fredrik; Deslauriers-Gauthier, Samuel; Ocegueda Gonzalez, J. Omar; Paquette, Michael; St-Jean, Samuel; Girard, Gabriel; Rheault, Francois; Sidhu, Jasmeen; Tax, Chantal M. W.; Guo, Fenghua; Mesri, Hamed Y.; David, Szabolcs; Froeling, Martijn; Heemskerk, Anneriet M.; Leemans, Alexander; Bore, Arnaud; Pinsard, Basile; Bedetti, Christophe; Desrosiers, Matthieu; Brambati, Simona; Doyon, Julien; Sarica, Alessia; Vasta, Roberta; Cerasa, Antonio; Quattrone, Aldo; Yeatman, Jason; Khan, Ali R.; Hodges, Wes; Alexander, Simon; Romascano, David; Barakovic, Muhamed; Auria, Anna; Esteban, Oscar; Lemkaddem, Alia; Thiran, Jean-Philippe; Cetingul, H. Ertan; Odry, Benjamin L.; Mailhe, Boris; Nadar, Mariappan S.; Pizzagalli, Fabrizio; Prasad, Gautam; Villalon-Reina, Julio E.; Galvis, Justin; Thompson, Paul M.; Requejo, Francisco De Santiago; Laguna, Pedro Luque; Lacerda, Luis Miguel; Barrett, Rachel; Dell'Acqua, Flavio; Catani, Marco; Petit, Laurent; Caruyer, Emmanuel; Daducci, Alessandro; Dyrby, Tim B.; Holland-Letz, Tim; Hilgetag, Claus C.; Stieltjes, Bram; Descoteaux, Maxime
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The challenge of mapping the human connectome based on diffusion tractography
err2017-11-07
err868
errOAAI
errMaier-Hein, Klaus H.; Neher, Peter F.; Houde, Jean-Christophe; Cote, Marc-Alexandre; Garyfallidis, Eleftherios; Zhong, Jidan; Chamberland, Maxime; Yeh, Fang-Cheng; Lin, Ying-Chia; Ji, Qing; Reddick, Wilburn E.; Glass, John O.; Chen, David Qixiang; Feng, Yuanjing; Gao, Chengfeng; Wu, Ye; Ma, Jieyan; Renjie, H.; Li, Qiang; Westin, Carl-Fredrik; Deslauriers-Gauthier, Samuel; Ocegueda Gonzalez, J. Omar; Paquette, Michael; St-Jean, Samuel; Girard, Gabriel; Rheault, Francois; Sidhu, Jasmeen; Tax, Chantal M. W.; Guo, Fenghua; Mesri, Hamed Y.; David, Szabolcs; Froeling, Martijn; Heemskerk, Anneriet M.; Leemans, Alexander; Bore, Arnaud; Pinsard, Basile; Bedetti, Christophe; Desrosiers, Matthieu; Brambati, Simona; Doyon, Julien; Sarica, Alessia; Vasta, Roberta; Cerasa, Antonio; Quattrone, Aldo; Yeatman, Jason; Khan, Ali R.; Hodges, Wes; Alexander, Simon; Romascano, David; Barakovic, Muhamed; Auria, Anna; Esteban, Oscar; Lemkaddem, Alia; Thiran, Jean-Philippe; Cetingul, H. Ertan; Odry, Benjamin L.; Mailhe, Boris; Nadar, Mariappan S.; Pizzagalli, Fabrizio; Prasad, Gautam; Villalon-Reina, Julio E.; Galvis, Justin; Thompson, Paul M.; Requejo, Francisco De Santiago; Laguna, Pedro Luque; Lacerda, Luis Miguel; Barrett, Rachel; Dell'Acqua, Flavio; Catani, Marco; Petit, Laurent; Caruyer, Emmanuel; Daducci, Alessandro; Dyrby, Tim B.; Holland-Letz, Tim; Hilgetag, Claus C.; Stieltjes, Bram; Descoteaux, Maxime
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3D-SSF: A bio-inspired approach for dynamic multi-subject clustering of white matter tracts
err2017-04-01
err2
PREAI
errChekir, A.; Hassas, S.; Descoteaux, M.; Cote, M.; Garyfallidis, E.; Oulebsir-Boumghar, F.
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A test-retest study on Parkinson's PPMI dataset yields statistically significant white matter fascicles
err2017-01-01
err105
errOAAI
errCousineau, Martin; Jodoin, Pierre-Marc; Garyfallidis, Eleftherios; Cote, Marc-Alexandre; Morency, Felix C.; Rozanski, Verena; Grand'Maison, Marilyn; Bedell, Barry J.; Descoteaux, Maxime
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Dynamic Changes in White Matter Abnormalities Correlate With Late Improvement and Deterioration Following TBI: A Diffusion Tensor Imaging Study
err2015-04-28
err57
errOAAI
errNewcombe, Virginia F. J.; Correia, Marta M.; Ledig, Christian; Abate, Maria G.; Outtrim, Joanne G.; Chatfield, Doris; Geeraerts, Thomas; Manktelow, Anne E.; Garyfallidis, Eleftherios; Pickard, John D.; Sahakian, Barbara J.; Hutchinson, Peter J. A.; Rueckert, Daniel; Coles, Jonathan P.; Williams, Guy B.; Menon, David K.
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Quantitative Comparison of Reconstruction Methods for Intra-Voxel Fiber Recovery From Diffusion MRI
err2014-02-01
err123
errOAAI
errDaducci, Alessandro; Jorge Canales-Rodriguez, Erick; Descoteaux, Maxime; Garyfallidis, Eleftherios; Gur, Yaniv; Lin, Ying-Chia; Mani, Merry; Merlet, Sylvain; Paquette, Michael; Ramirez-Manzanares, Alonso; Reisert, Marco; Reis Rodrigues, Paulo; Sepehrband, Farshid; Caruyer, Emmanuel; Choupan, Jeiran; Deriche, Rachid; Jacob, Mathews; Menegaz, Gloria; Prckovska, Vesna; Rivera, Mariano; Wiaux, Yves; Thiran, Jean-Philippe
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Tractometer: Towards validation of tractography pipelines
err2013-10-01
err172
PREAI
errCote, Marc-Alexandre; Girard, Gabriel; Bore, Arnaud; Garyfallidis, Eleftherios; Houde, Jean-Christophe; Descoteaux, Maxime
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Quick Bundles, a method for tractography simplification
err2012-01-01
err226
errOAAI
errGaryfallidis, Eleftherios; Brett, Matthew; Correia, Marta Morgado; Williams, Guy B.; Nimmo-Smith, Ian
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Extracting biomarkers of autism from MEG resting-state functional connectivity networks
err2011-12-01
err70
PREAI
errTsiaras, Vassilis; Simos, Panagiotis G.; Rezaie, Roozbeh; Sheth, Bhavin R.; Garyfallidis, Eleftherios; Castillo, Eduardo M.; Papanicolaou, Andrew C.
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