Andrew J. Gentles - Publications, H-index & Citations

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Andrew J. Gentles

stanford university

60H-index

300Paper Count

4.5WCitation Count

Published Papers 94

Publication Date

Non-invasive profiling of the tumour microenvironment with spatial ecotypes

Nature

IF48.5

2026-05-06

OAAI

Wubing Zhang; Erin L. Brown; Abul Usmani; Noah Earland; Minji Kang; Chibuzor Olelewe; Anushka Viswanathan; Pradeep S. Chauhan; Chloé B. Steen; Hyun Soo Jeon; Susanna Avagyan; Irfan Alahi; Nicholas P. Semenkovich; Janella C. Schwab; Chloe M. Sachs; Faridi Qaium; Peter K. Harris; Qingyuan Cai; Andrew J. Gentles; James Knight; Rondell P. Graham; Antonietta Bacchiocchi; Peter C. Lucas; Ryan C. Fields; Mario Sznol; Ruth Halaban; David Y. Chen; Aadel A. Chaudhuri; Aaron M. Newman

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Lymph node colonization induces tissue remodeling via immunosuppressive fibroblast-myeloid cell niches supporting metastatic tolerance

Cancer Cell

IF44.5

2026-01-29

OAAI

Maximilian Haist; Marc-A. Baertsch; Nathan E. Reticker-Flynn; Guolan Lu; Tim N. Kempchen; Pauline Chu; Gustavo Vazquez; Han Chen; John B. Sunwoo; Weiruo Zhang; Eyiwunmi Laseinde; Bonny Adami; Stefanie Zimmer; Justus Kaufman; Quynh Thu Le; Andrew J. Gentles; Christina S. Kong; Sylvia K. Plevritis; Yury Goltsev; John W. Hickey

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The ADAPT learning cancer treatment system: ARPA-H’s initiative to revolutionize cancer therapy

Cancer Cell

IF44.5

2026-01-08

PREAI

Andrea H. Bild; Michelle C. Sangar; Jasmine A. McQuerry; Trey Ideker; Scott Kopetz; Lisa Carey; Aritro Nath; Daniel Marcus; Allison Regier; Naim Rashid; Regina Barzilay; Eric Winer; Ravi Salgia; Jyoti Malhotra; Andrew Gentles; Kenneth Buetow; Faisal Mahmood; David W. Markman; James A. Eddy

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PRECOG update: an augmented resource of clinical outcome associations with gene expression for adult, pediatric, and immunotherapy cohorts

NUCLEIC ACIDS RESEARCH

IF13.1

2025-11-01

PREAI

Benard, Brooks A.; Lalgudi, Chinmay K.; Ilerten, Ilayda; Wang, Ruo Han; Gentles, Andrew j

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A single-cell framework identifies functionally and molecularly distinct multipotent progenitors in adult human hematopoiesis

Cell Reports

IF6.9

2025-09-03

OAAI

Asiri Ediriwickrema; Yusuke Nakauchi; Amy C. Fan; Thomas Köhnke; Xiaoyi Hu; Bogdan A. Luca; YeEun Kim; Sreejith Ramakrishnan; Margaret Nakamoto; Daiki Karigane; Miles H. Linde; Armon Azizi; Aaron M. Newman; Andrew J. Gentles; Ravindra Majeti

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The Immune Microenvironment of Transplant Glomerulitis

Kidney International Reports

IF5.7

2025-06-18

OAAI

Nathan A. Bracey; Jonathan S. Maltzman; Adrienne H. Long; Renu Dhanasekaran; Vishnu Shankar; Azam Mohsin; Neeraja Kambham; Gerlinde Wernig; Andrew J. Gentles; Mark M. Davis; Vivek Charu

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AML/T cell interactomics uncover correlates of patient outcomes and the key role of ICAM1 in T cell killing of AML

LEUKEMIA

IF13.4

2024-05-09

OAAI

Sayitoglu, Ece Canan; Luca, Bogdan A.; Boss, Allison Paige; Thomas, Benjamin Craig; Freeborn, Robert Arthur; Uyeda, Molly Javier; Chen, Pauline Ping; Nakauchi, Yusuke; Waichler, Colin; Lacayo, Norman; Bacchetta, Rosa; Majeti, Ravindra; Gentles, Andrew J.; Cepika, Alma-Martina; Roncarolo, Maria Grazia

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Cell-free RNA analysis for non-invasive cancer detection and characterization

CANCER RESEARCH

IF16.6

2024-03-22

PREAI

Nesselbush, Monica C.; Luca, Bogdan A.; Jeon, Young-Jun; Jabara, Isabel; Meador, Catherine B.; Binkley, Michael S.; Xu, Nova; Hui, Angela B.; Garofalo, Andrea; Shi, William Y.; Liu, Kevin J.; Sugio, Takeshi; Kastelowitz, Noah; Hamilton, Emily G.; Bonilla, Rene F.; Wang, Yi Peng; Jiang, Alice; Lau, Brianna; Eichholz, Jordan; Banwait, Mandeep; Schroers-Martin, Joseph; Boegeholz, Jan; King, Daniel A.; Esfahani, Mohammad S.; Raclin, Tyler; Tibshirani, Robert; Srinivas, Sandy; Nair, Viswam S.; Isbell, James M.; Li, Bob T.; Piotrowska, Zofia; Sequist, Lecia V.; Hata, Aaron N.; Neal, Joel W.; Wakelee, Heather A.; Gentles, Andrew J.; Alizadeh, Ash A.; Diehn, Maximilian

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Mutation order in acute myeloid leukemia identifies uncommon patterns of evolution and illuminates phenotypic heterogeneity

LEUKEMIA

IF13.4

2024-03-11

OAAI

Schwede, Matthew; Jahn, Katharina; Kuipers, Jack; Miles, Linde A.; Bowman, Robert L.; Robinson, Troy; Furudate, Ken; Uryu, Hidetaka; Tanaka, Tomoyuki; Sasaki, Yuya; Ediriwickrema, Asiri; Benard, Brooks; Gentles, Andrew J.; Levine, Ross; Beerenwinkel, Niko; Takahashi, Koichi; Majeti, Ravindra

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Translatome analysis reveals microglia and astrocytes to be distinct regulators of inflammation in the hyperacute and acute phases after stroke

GLIA

IF5.1

2023-04-17

OAAI

Hernandez, Victoria G.; Lechtenberg, Kendra J.; Peterson, Todd C.; Zhu, Li; Lucas, Tawaun A.; Bradshaw, Karen P.; Owah, Justice O.; Dorsey, Alanna I.; Gentles, Andrew J.; Buckwalter, Marion S.

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Multimodal data fusion for cancer biomarker discovery with deep learning

NATURE MACHINE INTELLIGENCE

IF23.9

2023-04-06

OAAI

Steyaert, Sandra; Pizurica, Marija; Nagaraj, Divya; Khandelwal, Priya; Hernandez-Boussard, Tina; Gentles, Andrew J.; Gevaert, Olivier

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Lymph node colonization promotes distant tumor metastasis through the induction of tumor-specific immune tolerance

CANCER RESEARCH

IF16.6

2023-04-04

PREAI

Reticker-Flynn, Nathan E.; Zhang, Weiruo; Belk, Julia A.; Basto, Pamela A.; Gentles, Andrew J.; Sunwoo, John B.; Satpathy, Ansuman T.; Plevritis, Sylvia K.; Engleman, Edgar G.

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High-resolution alignment of single-cell and spatial transcriptomes with CytoSPACE

NATURE BIOTECHNOLOGY

IF41.7

2023-03-06

OAAI

Vahid, Milad R.; Brown, Erin L.; Steen, Chloe B.; Zhang, Wubing; Jeon, Hyun Soo; Kang, Minji; Gentles, Andrew J.; Newman, Aaron M.

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Lymph node colonization promotes distant tumor metastasis through the induction of tumor-specific immune tolerance

CANCER RESEARCH

IF16.6

2023-01-15

PREAI

Reticker-Flynn, Nathan E.; Zhang, Weiruo; Belk, Julia A.; Basto, Pamela A.; Gentles, Andrew J.; Sunwoo, John B.; Satpathy, Ansuman K.; Plevritis, Sylvia K.; Engleman, Edgar G.

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Peripheral blood DNA methylation profiles predict future development of B-cell Non-Hodgkin Lymphoma

NPJ PRECISION ONCOLOGY

IF8

2022-07-21

OAAI

Espin-Perez, Almudena; Brennan, Kevin; Ediriwickrema, Asiri Saumya; Gevaert, Olivier; Lossos, Izidore S.; Gentles, Andrew J.

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Identification of cell types in multiplexed in situ images by combining protein expression and spatial information using CELESTA

NATURE METHODS

IF32.1

2022-06-02

OAAI

Zhang, Weiruo; Li, Irene; Reticker-Flynn, Nathan E.; Good, Zinaida; Chang, Serena; Samusik, Nikolay; Saumyaa, Saumyaa; Li, Yuanyuan; Zhou, Xin; Liang, Rachel; Kong, Christina S.; Le, Quynh-Thu; Gentles, Andrew J.; Sunwoo, John B.; Nolan, Garry P.; Engleman, Edgar G.; Plevritis, Sylvia K.

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NSD1 mutations deregulate transcription and DNA methylation of bivalent developmental genes in Sotos syndrome

HUMAN MOLECULAR GENETICS

IF3.2

2022-01-31

OAAI

Brennan, Kevin; Zheng, Hong; Fahrner, Jill A.; Shin, June Ho; Gentles, Andrew J.; Schaefer, Bradley; Sunwoo, John B.; Bernstein, Jonathan A.; Gevaert, Olivier

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Clonal architecture predicts clinical outcomes and drug sensitivity in acute myeloid leukemia

NATURE COMMUNICATIONS

IF15.7

2021-12-13

OAAI

Benard, Brooks A.; Leak, Logan B.; Azizi, Armon; Thomas, Daniel; Gentles, Andrew J.; Majeti, Ravindra

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HGAL inhibits lymphoma dissemination by interacting with multiple cytoskeletal proteins

BLOOD ADVANCES

IF7.1

2021-12-03

OAAI

Jiang, Xiaoyu; Lu, XiaoQing; Gentles, Andrew J.; Zhao, Dekuang; Wander, Seth A.; Zhang, Yu; Natkunam, Yasodha; Slingerland, Joyce; Reis, Isildinha M.; Rabinovich, Brian; Abdulreda, Midhat H.; Moy, Vincent T.; Lossos, Izidore S.

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High-grade serous ovarian tumor cells modulate NK cell function to create an immune-tolerant microenvironment

CELL REPORTS

IF6.9

2021-08-01

OAAI

Gonzalez, Veronica D.; Huang, Ying-Wen; Delgado-Gonzalez, Antonio; Chen, Shih-Yu; Donoso, Kenyi; Sachs, Karen; Gentles, Andrew J.; Allard, Grace M.; Kolahi, Kevin S.; Howitt, Brooke E.; Porpiglia, Ermelinda; Fantl, Wendy J.

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Research Directions