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Yu, Ying; Hou, Wanwan; Chen, Qingwang; Guo, Xiaorou; Sang, Leqing; Xue, Hao; Wang, Duo; Li, Jinming; Fang, Xiang; Dong, Lianhua; Shi, Leming; Zheng, Yuanting Share Save Chronic PM 2.5 exposure disrupts intestinal barrier integrity via microbial dysbiosis-triggered TLR2/5-MyD88-NLRP3 inflammasome activationRan, Zihan; Yang, Jingcheng; Liu, Liang; Wu, Shaobo; An, YanPeng; Hou, Wanwan; Cheng, Tianyuan; Zhang, Youyi; Zhang, Yiqing; Huang, Yechao; Zhang, Qianyue; Wan, Jiaping; Li, Xuemei; Xing, Baoling; Ye, Yuchen; Xu, Penghao; Chen, Zhenghu; Zhao, Jinzhuo; Li, Rui Share Save A real-world multi-center RNA-seq benchmarking study using the Quartet and MAQC reference materialsWang, Duo; Liu, Yaqing; Zhang, Yuanfeng; Chen, Qingwang; Han, Yanxi; Hou, Wanwan; Liu, Cong; Yu, Ying; Li, Ziyang; Li, Ziqiang; Zhao, Jiaxin; Shi, Leming; Zheng, Yuanting; Li, Jinming; Zhang, Rui Share Save Extend the benchmarking indel set by manual review using the individual cell line sequencing data from the Sequencing Quality Control 2 (SEQC2) projectGong, Binsheng; Li, Dan; Zhang, Yifan; Kusko, Rebecca; Lababidi, Samir; Cao, Zehui; Chen, Mingyang; Chen, Ning; Chen, Qiaochu; Chen, Qingwang; Dai, Jiacheng; Gan, Qiang; Gao, Yuechen; Guo, Mingkun; Hariani, Gunjan; He, Yujie; Hou, Wanwan; Jiang, He; Kushwaha, Garima; Li, Jian-Liang; Li, Jianying; Li, Yulan; Liu, Liang-Chun; Liu, Ruimei; Liu, Shiming; Meriaux, Edwin; Mo, Mengqing; Moore, Mathew; Moss, Tyler J.; Niu, Quanne; Patel, Ananddeep; Ren, Luyao; Saremi, Nedda F.; Shang, Erfei; Shang, Jun; Song, Ping; Sun, Siqi; Urban, Brent J.; Wang, Danke; Wang, Shangzi; Wen, Zhining; Xiong, Xiangyi; Yang, Jingcheng; Yin, Lihui; Zhang, Chao; Zhang, Ruolan; Bhandari, Ambica; Cai, Wanshi; Eterovic, Agda Karina; Megherbi, Dalila B.; Shi, Tieliu; Suo, Chen; Yu, Ying; Zheng, Yuanting; Novoradovskaya, Natalia; Sears, Renee L.; Shi, Leming; Jones, Wendell; Tong, Weida; Xu, Joshua Share Save Integrated multiomic profiling of breast cancer in the Chinese population reveals patient stratification and therapeutic vulnerabilitiesJiang, Yi-Zhou; Ma, Ding; Jin, Xi; Xiao, Yi; Yu, Ying; Shi, Jinxiu; Zhou, Yi-Fan; Fu, Tong; Lin, Cai-Jin; Dai, Lei-Jie; Liu, Cheng-Lin; Zhao, Shen; Su, Guan-Hua; Hou, Wanwan; Liu, Yaqing; Chen, Qingwang; Yang, Jingcheng; Zhang, Naixin; Zhang, Wen-Juan; Liu, Wei; Ge, Weigang; Yang, Wen-Tao; You, Chao; Gu, Yajia; Kaklamani, Virginia; Bertucci, Francois; Verschraegen, Claire; Daemen, Anneleen; Shah, Nakul M.; Wang, Ting; Guo, Tiannan; Shi, Leming; Perou, Charles M.; Zheng, Yuanting; Huang, Wei; Shao, Zhi-Ming Share Save Quartet metabolite reference materials for inter-laboratory proficiency test and data integration of metabolomics profilingZhang, Naixin; Chen, Qiaochu; Zhang, Peipei; Zhou, Kejun; Liu, Yaqing; Wang, Haiyan; Duan, Shumeng; Xie, Yongming; Yu, Wenxiang; Kong, Ziqing; Ren, Luyao; Hou, Wanwan; Yang, Jingcheng; Gong, Xiaoyun; Dong, Lianhua; Fang, Xiang; Shi, Leming; Yu, Ying; Zheng, Yuanting Share Save Quartet DNA reference materials and datasets for comprehensively evaluating germline variant calling performanceRen, Luyao; Duan, Xiaoke; Dong, Lianhua; Zhang, Rui; Yang, Jingcheng; Gao, Yuechen; Peng, Rongxue; Hou, Wanwan; Liu, Yaqing; Li, Jingjing; Yu, Ying; Zhang, Naixin; Shang, Jun; Liang, Fan; Wang, Depeng; Chen, Hui; Sun, Lele; Hao, Lingtong; Scherer, Andreas; Nordlund, Jessica; Xiao, Wenming; Xu, Joshua; Tong, Weida; Hu, Xin; Jia, Peng; Ye, Kai; Li, Jinming; Jin, Li; Hong, Huixiao; Wang, Jing; Fan, Shaohua; Fang, Xiang; Zheng, Yuanting; Shi, Leming Share Save Quartet RNA reference materials improve the quality of transcriptomic data through ratio-based profiling (Sept, 10.1038/s41587-023-01867-9, 2023)Yu, Ying; Hou, Wanwan; Liu, Yaqing; Wang, Haiyan; Dong, Lianhua; Mai, Yuanbang; Chen, Qingwang; Li, Zhihui; Sun, Shanyue; Yang, Jingcheng; Cao, Zehui; Zhang, Peipei; Zi, Yi; Liu, Ruimei; Gao, Jian; Zhang, Naixin; Li, Jingjing; Ren, Luyao; Jiang, He; Shang, Jun; Zhu, Sibo; Wang, Xiaolin; Qing, Tao; Bao, Ding; Li, Bingying; Li, Bin; Suo, Chen; Pi, Yan; Wang, Xia; Dai, Fangping; Scherer, Andreas; Mattila, Pirkko; Han, Jinxiong; Zhang, Lijun; Jiang, Hui; Thierry-Mieg, Danielle; Thierry-Mieg, Jean; Xiao, Wenming; Hong, Huixiao; Tong, Weida; Wang, Jing; Li, Jinming; Fang, Xiang; Jin, Li; Xu, Joshua; Qian, Feng; Zhang, Rui; Shi, Leming; Zheng, Yuanting Share Save Plasma-Free Blood as a Potential Alternative to Whole Blood for Transcriptomic AnalysisChen, Qingwang; Guo, Xiaorou; Wang, Haiyan; Sun, Shanyue; Jiang, He; Zhang, Peipei; Shang, Erfei; Zhang, Ruolan; Cao, Zehui; Niu, Quanne; Zhang, Chao; Liu, Yaqing; Shi, Leming; Yu, Ying; Hou, Wanwan; Zheng, Yuanting Share Save Quartet RNA reference materials improve the quality of transcriptomic data through ratio-based profilingYu, Ying; Hou, Wanwan; Liu, Yaqing; Wang, Haiyan; Dong, Lianhua; Mai, Yuanbang; Chen, Qingwang; Li, Zhihui; Sun, Shanyue; Yang, Jingcheng; Cao, Zehui; Zhang, Peipei; Zi, Yi; Liu, Ruimei; Gao, Jian; Zhang, Naixin; Li, Jingjing; Ren, Luyao; Jiang, He; Shang, Jun; Zhu, Sibo; Wang, Xiaolin; Qing, Tao; Bao, Ding; Li, Bingying; Li, Bin; Suo, Chen; Pi, Yan; Wang, Xia; Dai, Fangping; Scherer, Andreas; Mattila, Pirkko; Han, Jinxiong; Zhang, Lijun; Jiang, Hui; Thierry-Mieg, Danielle; Thierry-Mieg, Jean; Xiao, Wenming; Hong, Huixiao; Tong, Weida; Wang, Jing; Li, Jinming; Fang, Xiang; Jin, Li; Xu, Joshua; Qian, Feng; Zhang, Rui; Shi, Leming; Zheng, Yuanting Share Save Multi-omics data integration using ratio-based quantitative profiling with Quartet reference materialsZheng, Yuanting; Liu, Yaqing; Yang, Jingcheng; Dong, Lianhua; Zhang, Rui; Tian, Sha; Yu, Ying; Ren, Luyao; Hou, Wanwan; Zhu, Feng; Mai, Yuanbang; Han, Jinxiong; Zhang, Lijun; Jiang, Hui; Lin, Ling; Lou, Jingwei; Li, Ruiqiang; Lin, Jingchao; Liu, Huafen; Kong, Ziqing; Wang, Depeng; Dai, Fangping; Bao, Ding; Cao, Zehui; Chen, Qiaochu; Chen, Qingwang; Chen, Xingdong; Gao, Yuechen; Jiang, He; Li, Bin; Li, Bingying; Li, Jingjing; Liu, Ruimei; Qing, Tao; Shang, Erfei; Shang, Jun; Sun, Shanyue; Wang, Haiyan; Wang, Xiaolin; Zhang, Naixin; Zhang, Peipei; Zhang, Ruolan; Zhu, Sibo; Scherer, Andreas; Wang, Jiucun; Wang, Jing; Huo, Yinbo; Liu, Gang; Cao, Chengming; Shao, Li; Xu, Joshua; Hong, Huixiao; Xiao, Wenming; Liang, Xiaozhen; Lu, Daru; Jin, Li; Tong, Weida; Ding, Chen; Li, Jinming; Fang, Xiang; Shi, Leming Share Save Correcting batch effects in large-scale multiomics studies using a reference-material-based ratio methodYu, Ying; Zhang, Naixin; Mai, Yuanbang; Ren, Luyao; Chen, Qiaochu; Cao, Zehui; Chen, Qingwang; Liu, Yaqing; Hou, Wanwan; Yang, Jingcheng; Hong, Huixiao; Xu, Joshua; Tong, Weida; Dong, Lianhua; Shi, Leming; Fang, Xiang; Zheng, Yuanting Share Save Assessing reproducibility of inherited variants detected with short-read whole genome sequencingPan, Bohu; Ren, Luyao; Onuchic, Vitor; Guan, Meijian; Kusko, Rebecca; Bruinsma, Steve; Trigg, Len; Scherer, Andreas; Ning, Baitang; Zhang, Chaoyang; Glidewell-Kenney, Christine; Xiao, Chunlin; Donaldson, Eric; Sedlazeck, Fritz J.; Schroth, Gary; Yavas, Gokhan; Grunenwald, Haiying; Chen, Haodong; Meinholz, Heather; Meehan, Joe; Wang, Jing; Yang, Jingcheng; Foox, Jonathan; Shang, Jun; Miclaus, Kelci; Dong, Lianhua; Shi, Leming; Mohiyuddin, Marghoob; Pirooznia, Mehdi; Gong, Ping; Golshani, Rooz; Wolfinger, Russ; Lababidi, Samir; Sahraeian, Sayed Mohammad Ebrahim; Sherry, Steve; Han, Tao; Chen, Tao; Shi, Tieliu; Hou, Wanwan; Ge, Weigong; Zou, Wen; Guo, Wenjing; Bao, Wenjun; Xiao, Wenzhong; Fan, Xiaohui; Gondo, Yoichi; Yu, Ying; Zhao, Yongmei; Su, Zhenqiang; Liu, Zhichao; Tong, Weida; Xiao, Wenming; Zook, Justin M.; Zheng, Yuanting; Hong, Huixiao Share Save 
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