Not logged inTransmission of carbapenemase-producing Enterobacter in Ontario, Canada: a retrospective genomic analysis
Izydorczyk, Conrad; Lee, Robyn; Mataseje, Laura; Golding, George R.; Edge, Thomas A.; Boyd, Rachel; Braukmann, Tom; Carroll, Amanda; Katz, Kevin; Kozak, Robert; Jamal, Alainna J.; MacFadden, Derek R.; Mazzulli, Tony; Melano, Roberto; Mubareka, Samira; Patel, Samir; Poutanen, Susan M.; Richardson, David; Waglechner, Nicholas; McGeer, Allison .png)
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SaveShare Save Functional and Structural Characterization of Treatment-Emergent Nirmatrelvir Resistance Mutations at Low Frequencies in the Main Protease (Mpro) Reveals a Unique Evolutionary Route for SARS-CoV-2 to Gain ResistanceDeschenes, Natalie M.; Perez-Vargas, Jimena; Zhong, Zoe; Thomas, Merrilee; Kenward, Calem; Mosimann, Wesley A.; Worrall, Liam J.; Waglechner, Nicholas; Li, Angel XinLiu; Maguire, Finlay; Aftanas, Patryk; Smith, Jason R.; Lim, Jared; Young, Robert N.; Cherkasov, Artem; Farooqi, Lubna; Moinuddin, Adnan; Siddiqi, Lina; Malik, Imaan; Lefebvre, Maxime; Paetzel, Mark; Strynadka, Natalie C. J.; Jean, Francois; McGeer, Allison; Kozak, Robert A. Share Save Comparison of pharyngeal and invasive isolates of Streptococcus pyogenes by whole-genome sequencing in Toronto, CanadaZeppa, Joseph J.; Avery, Ellen G.; Aftanas, Patryk; Choi, Erin; Uleckas, Simone; Patel, Prachi; Waglechner, Nicholas; Jimenez, Hubert; Vermeiren, Christie; Katz, Kevin; Li, Xena X.; Maguire, Finlay; Kozak, Robert Share Save Genomic Epidemiology of Mycobacterium abscessus on the Island of Montréal Is Not Suggestive of Health Care-Associated Person-to-Person TransmissionOlawoye, Idowu B.; Waglechner, Nicholas; McIntosh, Fiona; Akochy, Pierre-Marie; Cloutier, Nancy; Grandjean Lapierre, Simon; Tannir, Bouchra; Greenaway, Christina; Matouk, Elias; Poirier, Louise; Levesque, Roger C.; Boyle, Brian; Quach, Caroline; Soualhine, Hafid; Batt, Jane; Behr, Marcel A.; Lee, Robyn S.; Guthrie, Jennifer L. Share Save Lessons from assembling a microbial natural product and pre-fractionated extract library in an academic laboratoryCook, Michael A.; Pallant, Daniel; Ejim, Linda; Sutherland, Arlene D.; Wang, Xiaodong; Johnson, Jarrod W.; Mccusker, Susan; Chen, Xuefei; George, Maya; Chou, Sommer; Koteva, Kalinka; Wang, Wenliang; Hobson, Christian; Hackenberger, Dirk; Waglechner, Nicholas; Ejim, Obi; Campbell, Tracey; Medina, Ricardo; Macneil, Lesley T.; Wright, Gerard D. Share Save Genomic epidemiology of Mycobacterium abscessus in a Canadian cystic fibrosis centreWaglechner, Nicholas; Tullis, Elizabeth; Stephenson, Anne L.; Waters, Valerie; McIntosh, Fiona; Ma, Jennifer; Jamieson, Frances B.; Behr, Marcel A.; Batt, Jane; Lee, Robyn S. Share Save Share Save Share Save Share Save Share Save Share Save Discovery of Ibomycin, a Complex Macrolactone that Exerts Antifungal Activity by Impeding Endocytic Trafficking and Membrane FunctionRobbins, Nicole; Spitzer, Michaela; Wang, Wenliang; Waglechner, Nicholas; Patel, Dhruv J.; O'Brien, Jonathan S.; Ejim, Linda; Ejim, Obi; Tyers, Mike; Wright, Gerard D. Share Save CARD 2017: expansion and model-centric curation of the comprehensive antibiotic resistance databaseJia, Baofeng; Raphenya, Amogelang R.; Alcock, Brian; Waglechner, Nicholas; Guo, Peiyao; Tsang, Kara K.; Lago, Briony A.; Dave, Biren M.; Pereira, Sheldon; Sharma, Arjun N.; Doshi, Sachin; Courtot, Melanie; Lo, Raymond; Williams, Laura E.; Frye, Jonathan G.; Elsayegh, Tariq; Sardar, Daim; Westman, Erin L.; Pawlowski, Andrew C.; Johnson, Timothy A.; Brinkman, Fiona S. L.; Wright, Gerard D.; McArthur, Andrew G. Share Save Share Save Rifampin phosphotransferase is an unusual antibiotic resistance kinaseStogios, Peter J.; Cox, Georgina; Spanogiannopoulos, Peter; Pillon, Monica C.; Waglechner, Nicholas; Skarina, Tatiana; Koteva, Kalinka; Guarne, Alba; Savchenko, Alexei; Wright, Gerard D. Share Save Eighteenth century Yersinia pestis genomes reveal the long-term persistence of an historical plague focusBos, Kirsten I.; Herbig, Alexander; Sahl, Jason; Waglechner, Nicholas; Fourment, Mathieu; Forrest, Stephen A.; Klunk, Jennifer; Schuenemann, Verena J.; Poinar, Debi; Kuch, Melanie; Golding, G. Brian; Dutour, Olivier; Keim, Paul; Wagner, David M.; Holmes, Edward C.; Krause, Johannes; Poinar, Hendrik N. Share Save Clinical utilization of genomics data produced by the international Pseudomonas aeruginosa consortiumFreschi, Luca; Jeukens, Julie; Kukavica-Ibrulj, Irene; Boyle, Brian; Dupont, Marie-Josee; Laroche, Jerome; Larose, Stephane; Maaroufi, Halim; Fothergill, Joanne L.; Moore, Matthew; Winsor, Geoffrey L.; Aaron, Shawn D.; Barbeau, Jean; Bell, Scott C.; Burns, Jane L.; Camara, Miguel; Cantin, Andre; Charette, Steve J.; Dewar, Ken; Deziel, Eric; Grimwood, Keith; Hancock, Robert E. W.; Harrison, Joe J.; Heebs, Stephan; Jelsbak, Lars; Jia, Baofeng; Kenna, Dervla T.; Kidd, Timothy J.; Klockgether, Jens; Lam, Joseph S.; Lamont, Iain L.; Lewenza, Shawn; Loman, Nick; Malouin, Francois; Manos, Jim; McArthur, Andrew G.; McKeown, Josie; Milot, Julie; Naghra, Hardeep; Nguyen, Dao; Pereira, Sheldon K.; Perron, Gabriel G.; Pirnay, Jean-Paul; Rainey, Paul B.; Rousseau, Simon; Santos, Pedro M.; Stephenson, Anne; Taylor, Veronique; Turton, Jane F.; Waglechner, Nicholas; Williams, Paul; Thrane, Sandra W.; Wright, Gerard D.; Brinkman, Fiona S. L.; Tucker, Nicholas P.; Tuemmler, Buerkhard; Winstanley, Craig; Levesque, Roger C. Share Save IslandViewer 3: more flexible, interactive genomic island discovery, visualization and analysisDhillon, Bhavjinder K.; Laird, Matthew R.; Shay, Julie A.; Winsor, Geoffrey L.; Lo, Raymond; Nizam, Fazmin; Pereira, Sheldon K.; Waglechner, Nicholas; McArthur, Andrew G.; Langille, Morgan G. I.; Brinkman, Fiona S. L. Share Save Vancomycin-Variable Enterococci Can Give Rise to Constitutive Resistance during Antibiotic TherapyThaker, Maulik N.; Kalan, Lindsay; Waglechner, Nicholas; Eshaghi, Alireza; Patel, Samir N.; Poutanen, Susan; Willey, Barbara; Coburn, Bryan; McGeer, Allison; Low, Donald E.; Wright, Gerard D. Share Save 
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