Mehdi Mesri - Publications, H-index & Citations

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Mehdi Mesri

National Cancer Institute

49H-index

136Paper Count

1.7WCitation Count

Published Papers 41

Publication Date

Integrative analysis of lung adenocarcinoma across diverse ethnicities and exposures

Cancer Cell

IF44.5

2025-07-31

OAAI

Shankha Satpathy; Natalie M. Clark; Yi-Ju Chen; Noshad Hosseini; Ya-Hsuan Chang; Yi Hsiao; Jonathan T. Lei; Francesca Petralia; Jin-Shing Chen; Yifat Geffen; David I. Heiman; Indranil Paul; Hanbyul Cho; Michelle Hollenberg; Giacomo B. Marino; Kuen-Tyng Lin; Rahul Mannan; C. Jackson White; Joe Allen; Shayan C. Avanessian; M. Harry Kane; Ashley Wolfe; Miloni Kinarivala; Wenke Liu; Shankara Anand; Mong-Wei Lin; Moe Haines; Erik J. Bergstrom; Grant Hussey; Ginny Xiaohe Li; Deepak C. Mani; Hao Fang; Eric J. Jaehnig; Hasmik Keshishian; Brecca Miller; Kang-Yi Su; Yi-Jing Hsiao; Hsao-Hsun Hsu; Min-Shu Hsieh; Kuo-Hsuan Hsu; Alexi Monovoukas; Simone Gohsman; John R. Thorup; Yamei Deng; Yo Akiyama; Eden Deng; Eric Sheng-Wen Chen; Azra Krek; Rodrigo Espinoza; Weiping Ma; Daniel Charytonowicz; Robert Sebra; Jyun-Hong Lin; Yan-Si Chen; Yin-Chen Hsu; Ze-Shiang Lin; Kun-Chieh Chen; Chang-Wei Yeh; Yu-Tai Wang; Alexander J. Lazar; Mehdi Mesri; Eunkyung An; Xu Zhang; Karl R. Clauser; David Fenyö; Arul M. Chinnaiyan; Bing Zhang; Li Ding; Kelly Ruggles; Chelsea Newton; Hui Zhang; Pei Wang; Galen Hostetter; Gilbert S. Omenn; Chandan Kumar-Sinha; Mathangi Thiagarajan; Ramaswamy Govindan; Paul Paik; Abhijit Parolia; Qing K. Li; Avi Ma’ayan; Gad A. Getz; Saravana M. Dhanasekaran; Ana I. Robles; Gee-Chen Chang; Pan-Chyr Yang; Sung-Liang Yu; Hsuan-Yu Chen; Alexey I. Nesvizhskii; Steven A. Carr; D.R. Mani; Marcin P. Cieslik; Yu-Ju Chen; Michael A. Gillette

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Comprehensive proteogenomic characterization of rare kidney tumors

CELL REPORTS MEDICINE

IF10.6

2024-05-01

OAAI

Li, Ginny Xiaohe; Chen, Lijun; Hsiao, Yi; Mannan, Rahul; Zhang, Yuping; Luo, Jie; Petralia, Francesca; Cho, Hanbyul; Hosseini, Noshad; Leprevost, Felipe da Veiga; Calinawan, Anna; Li, Yize; Anand, Shankara; Dagar, Aniket; Geffen, Yifat; Kumar-Sinha, Chandan; Chugh, Seema; Le, Anne; Ponce, Sean; Guo, Shenghao; Zhang, Cissy; Schnaubelt, Michael; Deen, Nataly Naser Al; Chen, Feng; Caravan, Wagma; Houston, Andrew; Hopkins, Alex; Newton, Chelsea J.; Wang, Xiaoming; Polasky, Daniel A.; Haynes, Sarah; Yu, Fengchao; Jing, Xiaojun; Chen, Siqi; Robles, Ana I.; Mesri, Mehdi; Thiagarajan, Mathangi; An, Eunkyung; Getz, Gad A.; Linehan, W. Marston; Hostetter, Galen; Jewell, Scott D.; Chan, Daniel W.; Wang, Pei; Omenn, Gilbert S.; Mehra, Rohit; Ricketts, Christopher J.; Ding, Li; Chinnaiyan, Arul M.; Cieslik, Marcin P.; Dhanasekaran, Saravana M.; Zhang, Hui; Nesvizhskii, Alexey I.

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Deciphering oncogenic dedifferentiation: A proteomic approach to quantifying stemness scores and unveiling druggable targets

CANCER RESEARCH

IF16.6

2024-04-05

PREAI

Kolodziejczak-Guglas, Iga; Simoes, Renan; Demicco, Elizabeth G.; Segura, Rossana L.; Lazar, Alexander J.; Ma, Weiping; Storrs, Erik; Petralia, Francesca; Colaprico, Antonio; da Leprevost, Felipe; Pugliese, Pietro; Ceccarelli, Michele; Nesvizhski, Alexey I.; Kaminska, Bozena; Zhang, Bing; Rodriguez, Henry; Mesri, Mehdi; Robles, Ana I.; Ding, Li; Malta, Tathiane M.; Wiznerowicz, Maciej

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A proteogenomic study of high-grade glioma among adolescents and young adults

CANCER RESEARCH

IF16.6

2024-03-22

PREAI

Tignor, Nicole; Koptyra, Mateusz P.; Chowdhury, Shrabanti; Ma, Weiping; Rokita, Jo Lynne; Gritsenko, Marina; Song, Xiaoyu; Marino, Giacomo B.; Deng, Eden Z.; Petralia, Francesca; Krek, Azra; Rykunov, Dmitry; Leprevost, Felipe da Veiga; Hosseini, Noshad; Rathi, Komal S.; Hu, Yingwei; Migliozzi, Simona; Yaron, Tomer; Fu, Weijia; Zhang, Bo; Zhu, Yuankun; Brown, Miguel A.; Whiteaker, Jeffrey R.; Mesri, Mehdi; Robles, Ana I.; Rodland, Karin; Cantley, Lewis C.; Iavarone, Antonio; Aldape, Kenneth; Cieslik, Marcin; Nesvizhskii, Alexey I.; Ippolito, Joseph E.; Rubin, Joshua B.; Paulovich, Amanda G.; Zhang, Hui; Ma'ayan, Avi; Liu, Tao; Storm, Phillip B.; Resnick, Adam C.; Rood, Brian R.; Wang, Pei

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NCI's Clinical Proteomic Tumor Analysis Consortium: A proteogenomic cancer analysis program

CANCER RESEARCH

IF16.6

2024-03-22

PREAI

Mesri, Mehdi; An, Eunkyung; Zhang, Xu; Bavarva, Jasmin; Robles, Ana I.; Hiltke, Tara; Rodriguez, Henry

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Epigenetic and transcriptomic characterization reveals progression markers and essential pathways in clear cell renal cell carcinoma (vol 14, 1681, 2023)

NATURE COMMUNICATIONS

IF15.7

2023-05-17

OAAI

Wu, Yige; Terekhanova, Nadezhda V.; Caravan, Wagma; Al Deen, Nataly Naser; Lal, Preet; Chen, Siqi; Mo, Chia-Kuei; Cao, Song; Li, Yize; Karpova, Alla; Liu, Ruiyang; Zhao, Yanyan; Shinkle, Andrew; Strunilin, Ilya; Weimholt, Cody; Sato, Kazuhito; Yao, Lijun; Serasanambati, Mamatha; Yang, Xiaolu; Wyczalkowski, Matthew; Zhu, Houxiang; Zhou, Daniel Cui; Jayasinghe, Reyka G.; Mendez, Daniel; Wendl, Michael C.; Clark, David; Newton, Chelsea; Ruan, Yijun; Reimers, Melissa A.; Pachynski, Russell K.; Kinsinger, Chris; Jewell, Scott; Chan, Daniel W.; Zhang, Hui; Chaudhuri, Aadel A.; Chheda, Milan G.; Humphreys, Benjamin D.; Mesri, Mehdi; Rodriguez, Henry; Hsieh, James J.; Ding, Li; Chen, Feng

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Proteomic-based stemness score measure oncogenic dedifferentiation and enable the identification of druggable targets

CANCER RESEARCH

IF16.6

2023-04-14

PREAI

Malta, Tathiane M.; Kolodziejczak, Iga; Simoes, Renan; Colaprico, Antonio; Storrs, Erik; Petralia, Francesca; da von Leprevost, Felipe; Segura, Rossana L.; Demicco, Elizabeth; Lazar, Alexander J.; Ma, Weiping; Pugliese, Pietro; Ceccarelli, Michele; Kaminska, Bozena; Nesvizhski, Alexey I.; Zhang, Bing; Rodriguez, Henry; Mesri, Mehdi; Robles, Ana I.; Ding, Li; Wiznerowicz, Maciej

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NCI's clinical proteomic tumor analysis consortium analysis tools and resources

CANCER RESEARCH

IF16.6

2023-04-04

PREAI

Mesri, Mehdi; An, Eunkyung; Zhang, Xu; Bavarva, Jasmin; Robles, Ana I.; Hiltke, Tara; Rodriguez, Henry

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Epigenetic and transcriptomic characterization reveals progression markers and essential pathways in clear cell renal cell carcinoma

NATURE COMMUNICATIONS

IF15.7

2023-03-27

OAAI

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Comprehensive economic analysis and multi-objective optimization of an integrated gasification power generation cycle

PROCESS SAFETY AND ENVIRONMENTAL PROTECTION

IF7.8

2021-11-01

PREAI

Gao, Zhenjuan; Miao, Jianchun; Zhao, Jingfeng; Mesri, Mehdi

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NCI's Clinical Proteomic Tumor Analysis Consortium: A proteogenomic cancer analysis program

CANCER RESEARCH

IF16.6

2020-08-15

PREAI

Mesri, Mehdi; Boja, Emily; Hiltke, Tara; Kinsinger, Christopher R.; Marrero-Oliveras, Annette; Robles, Ana; Rodriguez, Henry

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Regulated Phosphosignaling Associated with Breast Cancer Subtypes and Druggability

MOLECULAR & CELLULAR PROTEOMICS

IF5.5

2019-08-01

OAAI

Huang, Kuan-lin; Wu, Yige; Primeau, Tina; Wang, Yi-Ting; Gao, Yuqian; McMichael, Joshua F.; Scott, Adam D.; Cao, Song; Wendl, Michael C.; Johnson, Kimberly J.; Ruggles, Kelly; Held, Jason; Payne, Samuel H.; Davies, Sherri; Dar, Arvin; Kinsinger, Christopher R.; Mesri, Mehdi; Rodriguez, Henry; Ellis, Matthew J.; Townsend, R. Reid; Chen, Feng; Fenyo, David; Li, Shunqiang; Liu, Tao; Carr, Steven A.; Ding, Li

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NCI's clinical proteomic tumor analysis consortium: A proteogenomic cancer analysis program

CANCER RESEARCH

IF16.6

2019-07-01

PREAI

Mesri, Mehdi; Boja, Emily; Carter, Alexis; Hiltke, Tara; Kinsinger, Chris; Marrero-Oliveras, Annette; Robles, Ana; Rodriguez, Henry

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Proteogenomic integration reveals therapeutic targets in breast cancer xenografts (vol 8, 14864, 2017)

NATURE COMMUNICATIONS

IF15.7

2017-04-25

OAAI

Huang, Kuan-lin; Li, Shunqiang; Mertins, Philipp; Cao, Song; Gunawardena, Harsha P.; Ruggles, Kelly V.; Mani, D. R.; Clauser, Karl R.; Tanioka, Maki; Usary, Jerry; Kavuri, Shyam M.; Xie, Ling; Yoon, Christopher; Qiao, Jana W.; Wrobel, John; Wyczalkowski, Matthew A.; Erdmann-Gilmore, Petra; Snider, Jacqueline E.; Hoog, Jeremy; Singh, Purba; Niu, Beifang; Guo, Zhanfang; Sun, Sam Qiancheng; Sanati, Souzan; Kawaler, Emily; Wang, Xuya; Scott, Adam; Ye, Kai; McLellan, Michael D.; Wendl, Michael C.; Malovannaya, Anna; Held, Jason M.; Gillette, Michael A.; Fenyo, David; Kinsinger, Christopher R.; Mesri, Mehdi; Rodriguez, Henry; Davies, Sherri R.; Perou, Charles M.; Ma, Cynthia; Townsend, R. Reid; Chen, Xian; Carr, Steven A.; Ellis, Matthew J.; Ding, Li

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Proteogenomic integration reveals therapeutic targets in breast cancer xenografts

NATURE COMMUNICATIONS

IF15.7

2017-03-28

115

OAAI

Huang, Kuan-lin; Li, Shunqiang; Mertins, Philipp; Cao, Song; Gunawardena, Harsha P.; Ruggles, Kelly V.; Mani, D. R.; Clauser, Karl R.; Tanioka, Maki; Usary, Jerry; Kavuri, Shyam M.; Xie, Ling; Yoon, Christopher; Qiao, Jana W.; Wrobel, John; Wyczalkowski, Matthew A.; Erdmann-Gilmore, Petra; Snider, Jacqueline E.; Hoog, Jeremy; Singh, Purba; Niu, Beifung; Guo, Zhanfang; Sun, Sam Qiancheng; Sanati, Souzan; Kawaler, Emily; Wang, Xuya; Scott, Adam; Ye, Kai; McLellan, Michael D.; Wendl, Michael C.; Malovannaya, Anna; Held, Jason M.; Gillette, Michael A.; Fenyo, David; Kinsinger, Christopher R.; Mesri, Mehdi; Rodriguez, Henry; Davies, Sherri R.; Perou, Charles M.; Ma, Cynthia; Townsend, R. Reid; Chen, Xian; Carr, Steven A.; Ellis, Matthew J.; Ding, Li

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Proteome Profiling Outperforms Transcriptome Profiling for Coexpression Based Gene Function Prediction

MOLECULAR & CELLULAR PROTEOMICS

IF5.5

2017-01-01

119

OAAI

Wang, Jing; Ma, Zihao; Carr, Steven A.; Mertins, Philipp; Zhang, Hui; Zhang, Zhen; Chan, Daniel W.; Ellis, Matthew J. C.; Townsend, R. Reid; Smith, Richard D.; McDermott, Jason E.; Chen, Xian; Paulovich, Amanda G.; Boja, Emily S.; Mesri, Mehdi; Kinsinger, Christopher R.; Rodriguez, Henry; Rodland, Karin D.; Liebler, Daniel C.; Zhang, Bing

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NCI's Clinical Proteomic Tumor Analysis Consortium

CANCER RESEARCH

IF16.6

2016-07-15

PREAI

Mesri, Mehdi; Boja, Emily; Hiltke, Tara; Kinsinger, Chris; Lee, Jerry; Rodriguez, Henry

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A Description of the Clinical Proteomic Tumor Analysis Consortium (CPTAC) Common Data Analysis Pipeline

JOURNAL OF PROTEOME RESEARCH

IF3.6

2016-02-25

107

OAAI

Rudnick, Paul A.; Markey, Sanford P.; Roth, Jeri; Mirokhin, Yuri; Yan, Xinjian; Tchekhovskoi, Dmitrii V.; Edwards, Nathan J.; Thangudu, Ratna R.; Ketchum, Karen A.; Kinsinger, Christopher R.; Mesri, Mehdi; Rodriguez, Henry; Stein, Stephen E.

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Recommendations for the Generation, Quantification, Storage, and Handling of Peptides Used for Mass Spectrometry-Based Assays

CLINICAL CHEMISTRY

IF6.3

2016-01-01

193

OAAI

Hoofnagle, Andrew N.; Whiteaker, Jeffrey R.; Carr, Steven A.; Kuhn, Eric; Liu, Tao; Massoni, Sam A.; Thomas, Stefani N.; Townsend, R. Reid; Zimmerman, Lisa J.; Boja, Emily; Chen, Jing; Crimmins, Daniel L.; Davies, Sherri R.; Gao, Yugian; Hiltke, Tara R.; Ketchum, Karen A.; Kinsinger, Christopher R.; Mesri, Mehdi; Meyer, Matthew R.; Qian, Wei-Jun; Schoenherr, Regine M.; Scott, Mitchell G.; Shi, Tujin; Whiteley, Gordon R.; Wrobel, John A.; Wu, Chaochao; Ackermann, Brad L.; Aebersold, Ruedi; Barnidge, David R.; Bunk, David M.; Clarke, Nigel; Fishman, Jordan B.; Grant, Russ P.; Kusebauch, Ulrike; Kushnir, Mark M.; Lowenthal, Mark S.; Moritz, Robert L.; Neubert, Hendrik; Patterson, Scott D.; Rockwood, Alan L.; Rogers, John; Singh, Ravinder J.; Van Eyk, Jennifer E.; Wong, Steven H.; Zhang, Shucha; Chan, Daniel W.; Chen, Xian; Ellis, Matthew J.; Liebler, Daniel C.; Rodland, Karin D.; Rodriguez, Henry; Smith, Richard D.; Zhang, Zhen; Zhang, Hui; Paulovich, Amanda G.

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Reproducibility of Differential Proteomic Technologies in CPTAC Fractionated Xenografts

JOURNAL OF PROTEOME RESEARCH

IF3.6

2015-12-22

OAAI

Tabb, David L.; Wang, Xia; Carr, Steven A.; Clauser, Karl R.; Mertins, Philipp; Chambers, Matthew C.; Holman, Jerry D.; Wang, Jing; Zhang, Bing; Zimmerman, Lisa J.; Chen, Xian; Gunawardena, Harsha P.; Davies, Sherri R.; Ellis, Matthew J. C.; Li, Shunqiang; Townsend, R. Reid; Boja, Emilsy S.; Ketchum, Karen A.; Kinsinger, Christopher R.; Mesri, Mehdi; Rodriguez, Henry; Liu, Tao; Kim, Sangtae; McDermott, Jason E.; Payne, Samuel H.; Petyuk, Vladislav A.; Rodland, Karin D.; Smith, Richard D.; Yang, Feng; Chan, Daniel W.; Zhang, Bai; Zhang, Hui; Zhang, Zhen; Zhou, Jian-Ying; Liebler, Daniel C.

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Research Directions