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Marc Fiume
university of toronto
15H-index
21Paper Count
4.3KCitation Count
Published Papers 11
Publication Date
- Publication Date
- Impact Factor
- Citations
GA4GH: International policies and standards for data sharing across genomic research and healthcare
2021-11-01
96
OAAI
Rehm, Heidi L.; Page, Angela J. H.; Smith, Lindsay; Adams, Jeremy B.; Alterovitz, Gil; Babb, Lawrence J.; Barkley, Maxmillian P.; Baudis, Michael; Beauvais, Michael J. S.; Beck, Tim; Beckmann, Jacques S.; Beltran, Sergi; Bernick, David; Bernier, Alexander; Bonfield, James K.; Boughtwood, Tiffany F.; Bourque, Guillaume; Bowers, Sarion R.; Brookes, Anthony J.; Brudno, Michael; Brush, Matthew H.; Bujold, David; Burdett, Tony; Buske, Orion J.; Cabili, Moran N.; Cameron, Daniel L.; Carroll, Robert J.; Casas-Silva, Esmeralda; Chakravarty, Debyani; Chaudhari, Bimal P.; Chen, Shu Hui; Cherry, J. Michael; Chung, Justina; Cline, Melissa; Clissold, Hayley L.; Cook-Deegan, Robert M.; Courtot, Melanie; Cunningham, Fiona; Cupak, Miro; Davies, Robert M.; Denisko, Danielle; Doerr, Megan J.; Dolman, Lena I.; Dove, Edward S.; Dursi, L. Jonathan; Dyke, Stephanie O. M.; Eddy, James A.; Eilbeck, Karen; Ellrott, Kyle P.; Fairley, Susan; Fakhro, Khalid A.; Firth, Helen V.; Fitzsimons, Michael S.; Fiume, Marc; Flicek, Paul; Fore, Ian M.; Freeberg, Mallory A.; Freimuth, Robert R.; Fromont, Lauren A.; Fuerth, Jonathan; Gaff, Clara L.; Gan, Weiniu; Ghanaim, Elena M.; Glazer, David; Green, Robert C.; Griffith, Malachi; Griffith, Obi L.; Grossman, Robert L.; Groza, Tudor; Auvil, Jaime M. Guidry; Guigo, Roderic; Gupta, Dipayan; Haendel, Melissa A.; Hamosh, Ada; Hansen, David P.; Hart, Reece K.; Hartley, Dean Mitchell; Haussler, David; Hendricks-Sturrup, Rachele M.; Ho, Calvin W. L.; Hobb, Ashley E.; Hoffman, Michael M.; Hofmann, Oliver M.; Holub, Petr; Hsu, Jacob Shujui; Hubaux, Jean-Pierre; Hunt, Sarah E.; Husami, Ammar; Jacobsen, Julius O.; Jamuar, Saumya S.; Janes, Elizabeth L.; Jeanson, Francis; Jene, Aina; Johns, Amber L.; Joly, Yann; Jones, Steven J. M.; Kanitz, Alexander; Kato, Kazuto; Keane, Thomas M.; Kekesi-Lafrance, Kristina; Kelleher, Jerome; Kerry, Giselle; Khor, Seik-Soon; Knoppers, Bartha M.; Konopko, Melissa A.; Kosaki, Kenjiro; Kuba, Martin; Lawson, Jonathan; Leinonen, Rasko; Li, Stephanie; Lin, Michael F.; Linden, Mikael; Liu, Xianglin; Liyanage, Isuru Udara; Lopez, Javier; Lucassen, Anneke M.; Lukowski, Michael; Mann, Alice L.; Marshall, John; Mattioni, Michele; Metke-Jimenez, Alejandro; Middleton, Anna; Milne, Richard J.; Molnar-Gabor, Fruzsina; Mulder, Nicola; Munoz-Torres, Monica C.; Nag, Rishi; Nakagawa, Hidewaki; Nasir, Jamal; Navarro, Arcadi; Nelson, Tristan H.; Niewielska, Ania; Nisselle, Amy; Niu, Jeffrey; Nyronen, Tommi H.; O'Connor, Brian D.; Oesterle, Sabine; Ogishima, Soichi; Wang, Vivian Ota; Paglione, Laura A. D.; Palumbo, Emilio; Parkinson, Helen E.; Philippakis, Anthony A.; Pizarro, Angel D.; Prlic, Andreas; Rambla, Jordi; Rendon, Augusto; Rider, Renee A.; Robinson, Peter N.; Rodarmer, Kurt W.; Rodriguez, Laura Lyman; Rubin, Alan F.; Rueda, Manuel; Rushton, Gregory A.; Ryan, Rosalyn S.; Saunders, Gary I.; Schuilenburg, Helen; Schwede, Torsten; Scollen, Serena; Senf, Alexander; Sheffield, Nathan C.; Skantharajah, Neerjah; Smith, Albert V.; Sofia, Heidi J.; Spalding, Dylan; Spurdle, Amanda B.; Stark, Zornitza; Stein, Lincoln D.; Suematsu, Makoto; Tan, Patrick; Tedds, Jonathan A.; Thomson, Alastair A.; Thorogood, Adrian; Tickle, Timothy L.; Tokunaga, Katsushi; Tomroos, Juha; Torrents, David; Upchurch, Sean; Valencia, Alfonso; Guimera, Roman Valls; Vamathevan, Jessica; Varma, Susheel; Vears, Danya F.; Viner, Coby; Voisin, Craig; Wagner, Alex H.; Wallace, Susan E.; Walsh, Brian P.; Williams, Marc S.; Winkler, Eva C.; Wold, Barbara J.; Wood, Grant M.; Woolley, J. Patrick; Yamasaki, Chisato; Yates, Andrew D.; Yung, Christina K.; Zass, Lyndon J.; Zaytseva, Ksenia; Zhang, Junjun; Goodhand, Peter; North, Kathryn; Birney, Ewan
International federation of genomic medicine databases using GA4GH standards
2021-11-01
23
OAAI
Thorogood, Adrian; Rehm, Heidi L.; Goodhand, Peter; Page, Angela J. H.; Joly, Yann; Baudis, Michael; Rambla, Jordi; Navarro, Arcadi; Nyronen, Tommi H.; Linden, Mikael; Dove, Edward S.; Fiume, Marc; Brudno, Michael; Cline, Melissa S.; Birney, Ewan
Federated discovery and sharing of genomic data using Beacons (vol 37, pg 220, 2019)
NATURE BIOTECHNOLOGY
2019-03-20
1
OAAI
Fiume, Marc; Cupak, Miroslav; Keenan, Stephen; Rambla, Jordi; de la Torre, Sabela; Dyke, Stephanie O. M.; Brookes, Anthony J.; Carey, Knox; Lloyd, David; Goodhand, Peter; Haeussler, Maximilian; Baudis, Michael; Stockinger, Heinz; Dolman, Lena; Lappalainen, Ilkka; Tornroos, Juha; Linden, Mikael; Spalding, J. Dylan; Ur-Rehman, Saif; Page, Angela; Flicek, Paul; Sherry, Stephen; Haussler, David; Varma, Susheel; Saunders, Gary; Scollen, Serena
IF41.7
Federated discovery and sharing of genomic data using Beacons
NATURE BIOTECHNOLOGY
2019-03-04
60
OAAI
Fiume, Marc; Cupak, Miroslav; Keenan, Stephen; Rambla, Jordi; de la Torre, Sabela; Dyke, Stephanie O. M.; Brookes, Anthony J.; Carey, Knox; Lloyd, David; Goodhand, Peter; Haeussler, Maximilian; Baudis, Michael; Stockinger, Heinz; Dolman, Lena; Lappalainen, Ilkka; Tornroos, Juha; Linden, Mikael; Spalding, J. Dylan; Ur-Rehman, Saif; Page, Angela; Flicek, Paul; Sherry, Stephen; Haussler, David; Varma, Susheel; Saunders, Gary; Scollen, Serena
IF41.7
ClinGen advancing genomic data-sharing standards as a GA4GH driver project
HUMAN MUTATION
2018-10-11
12
OAAI
Dolman, Lena; Page, Angela; Babb, Lawrence; Freimuth, Robert R.; Arachchi, Harindra; Bizon, Chris; Brush, Matthew; Fiume, Marc; Haendel, Melissa; Hansen, David P.; Milosavljevic, Aleksandar; Patel, Ronak Y.; Pawliczek, Piotr; Yates, Andrew D.; Rehm, Heidi L.
IF3.7
Registered access: authorizing data access
2018-08-02
26
OAAI
Dyke, Stephanie O. M.; Linden, Mikael; Lappalainen, Ilkka; Rambla De Argila, Jordi; Carey, Knox; Lloyd, David; Spalding, J. Dylan; Cabili, Moran N.; Kerry, Giselle; Foreman, Julia; Cutts, Tim; Shabani, Mahsa; Rodriguez, Laura L.; Haeussler, Maximilian; Walsh, Brian; Jiang, Xiaoqian; Wang, Shuang; Perrett, Daniel; Boughtwood, Tiffany; Matern, Andreas; Brookes, Anthony J.; Cupak, Miro; Fiume, Marc; Pandya, Ravi; Tulchinsky, Ilia; Scollen, Serena; Tornroos, Juha; Das, Samir; Evans, Alan C.; Malin, Bradley A.; Beck, Stephan; Brenner, Steven E.; Nyronen, Tommi; Blomberg, Niklas; Firth, Helen V.; Hurles, Matthew; Philippakis, Anthony A.; Ratsch, Gunnar; Brudno, Michael; Boycott, Kym M.; Rehm, Heidi L.; Baudis, Michael; Sherry, Stephen T.; Kato, Kazuto; Knoppers, Bartha M.; Baker, Dixie; Flicek, Paul
The Personal Genome Project Canada: findings from whole genome sequences of the inaugural 56 participants
2018-02-02
49
OAAI
Reuter, Miriam S.; Walker, Susan; Thiruvahindrapuram, Bhooma; Whitney, Joe; Cohn, Iris; Sondheimer, Neal; Yuen, Ryan K. C.; Trost, Brett; Paton, Tara A.; Pereira, Sergio L.; Herbrick, Jo-Anne; Wintle, Richard F.; Merico, Daniele; Howe, Jennifer; MacDonald, Jeffrey R.; Lu, Chao; Nalpathamkalam, Thomas; Sung, Wilson W. L.; Wang, Zhuozhi; Patel, Rohan V.; Pellecchia, Giovanna; Wei, John; Strug, Lisa J.; Bell, Sherilyn; Kellam, Barbara; Mahtani, Melanie M.; Bassett, Anne S.; Bombard, Yvonne; Weksberg, Rosanna; Shuman, Cheryl; Cohn, Ronald D.; Stavropoulos, Dimitri J.; Bowdin, Sarah; Hildebrandt, Matthew R.; Wei, Wei; Romm, Asli; Pasceri, Peter; Ellis, James; Ray, Peter; Meyn, M. Stephen; Monfared, Nasim; Hosseini, S. Mohsen; Joseph-George, Ann M.; Keeley, Fred W.; Cook, Ryan A.; Fiume, Marc; Lee, Hin C.; Marshall, Christian R.; Davies, Jill; Hazell, Allison; Buchanan, Janet A.; Szego, Michael J.; Scherer, Stephen W.
Similarity network fusion for aggregating data types on a genomic scale
NATURE METHODS
2014-01-26
1.4K
Wang, Bo; Mezlini, Aziz M.; Demir, Feyyaz; Fiume, Marc; Tu, Zhuowen; Brudno, Michael; Haibe-Kains, Benjamin; Goldenberg, Anna
IF32.1
PREAI
PhenoTips: Patient Phenotyping Software for Clinical and Research Use
HUMAN MUTATION
2013-05-24
187
OAAI
Girdea, Marta; Dumitriu, Sergiu; Fiume, Marc; Bowdin, Sarah; Boycott, Kym M.; Chenier, Sebastien; Chitayat, David; Faghfoury, Hanna; Meyn, M. Stephen; Ray, Peter N.; So, Joyce; Stavropoulos, Dimitri J.; Brudno, Michael
IF3.7
iReckon: Simultaneous isoform discovery and abundance estimation from RNA-seq data
GENOME RESEARCH
2012-11-29
101
OAAI
Mezlini, Aziz M.; Smith, Eric J. M.; Fiume, Marc; Buske, Orion; Savich, Gleb L.; Shah, Sohrab; Aparicio, Sam; Chiang, Derek Y.; Goldenberg, Anna; Brudno, Michael
IF5.5
Detecting copy number variation with mated short reads
GENOME RESEARCH
2010-08-30
250
OAAI
Medvedev, Paul; Fiume, Marc; Dzamba, Misko; Smith, Tim; Brudno, Michael
IF5.5
Research Directions
No research directions

