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Development and validation of AI/ML derived splice-switching oligonucleotides Fronk, Alyssa D.; Manzanares, Miguel A.; Zheng, Paulina; Geier, Adam; Anderson, Kendall; Stanton, Shaleigh; Zumrut, Hasan; Gera, Sakshi; Munch, Robin; Frederick, Vanessa; Dhingra, Priyanka; Arun, Gayatri; Akerman, Martin Share Save
A novel oral formulation of the melanocortin-1 receptor agonist PL8177 resolves inflammation in preclinical studies of inflammatory bowel disease and is gut restricted in rats, dogs, and humans Dodd, John; Jordan, Robert; Makhlina, Marie; Barnett, Keith; Roffel, Ad; Spana, Carl; Obr, Alison; Dhingra, Priyanka; Kayne, Paul S. Share Save
Pathway and network analysis of more than 2500 whole cancer genomes (vol 11, 729, 2020) Reyna, Matthew A.; Haan, David; Paczkowska, Marta; Verbeke, Lieven P. C.; Vazquez, Miguel; Kahraman, Abdullah; Pulido-Tamayo, Sergio; Barenboim, Jonathan; Wadi, Lina; Dhingra, Priyanka; Shrestha, Raunak; Getz, Gad; Lawrence, Michael S.; Pedersen, Jakob Skou; Rubin, Mark A.; Wheeler, David A.; Brunak, Sren; Izarzugaza, Jose M. G.; Khurana, Ekta; Marchal, Kathleen; von Mering, Christian; Sahinalp, S. Cenk; Valencia, Alfonso; Reimand, Jueri; Stuart, Joshua M.; Raphael, Benjamin J. Share Save
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Pathway and network analysis of more than 2500 whole cancer genomes Reyna, Matthew A.; Haan, David; Paczkowska, Marta; Verbeke, Lieven P. C.; Vazquez, Miguel; Kahraman, Abdullah; Pulido-Tamayo, Sergio; Barenboim, Jonathan; Wadi, Lina; Dhingra, Priyanka; Shrestha, Raunak; Getz, Gad; Lawrence, Michael S.; Pedersen, Jakob Skou; Rubin, Mark A.; Wheeler, David A.; Brunak, Soren; Izarzugaza, Jose M. G.; Khurana, Ekta; Marchal, Kathleen; von Mering, Christian; Sahinalp, S. Cenk; Valencia, Alfonso; Reimand, Juri; Stuart, Joshua M.; Raphael, Benjamin J. Share Save
Cancer LncRNA Census reveals evidence for deep functional conservation of long noncoding RNAs in tumorigenesis Carlevaro-Fita, Joana; Lanzos, Andres; Feuerbach, Lars; Hong, Chen; Mas-Ponte, David; Pedersen, Jakob Skou; Johnson, Rory; Abascal, Federico; Amin, Samirkumar B.; Bader, Gary D.; Barenboim, Jonathan; Beroukhim, Rameen; Bertl, Johanna; Boroevich, Keith A.; Brunak, Soren; Campbell, Peter J.; Carlevaro-Fita, Joana; Chakravarty, Dimple; Chan, Calvin Wing Yiu; Chen, Ken; Choi, Jung Kyoon; Deu-Pons, Jordi; Dhingra, Priyanka; Diamanti, Klev; Feuerbach, Lars; Fink, J. Lynn; Fonseca, Nuno A.; Frigola, Joan; Gambacorti-Passerini, Carlo; Garsed, Dale W.; Gerstein, Mark; Getz, Gad; Gonzalez-Perez, Abel; Guo, Qianyun; Gut, Ivo G.; Haan, David; Hamilton, Mark P.; Haradhvala, Nicholas J.; Harmanci, Arif O.; Helmy, Mohamed; Herrmann, Carl; Hess, Julian M.; Hobolth, Asger; Hodzic, Ermin; Hong, Chen; Hornshoj, Henrik; Isaev, Keren; Izarzugaza, Jose M. G.; Johnson, Todd A.; Juul, Malene; Juul, Randi Istrup; Kahles, Andre; Kahraman, Abdullah; Kellis, Manolis; Khurana, Ekta; Kim, Jaegil; Kim, Jong K.; Kim, Youngwook; Komorowski, Jan; Korbel, Jan O.; Kumar, Sushant; Lanzos, Andres; Larsson, Erik; Lawrence, Michael S.; Lee, Donghoon; Lehmann, Kjong-Van; Li, Shantao; Li, Xiaotong; Lin, Ziao; Liu, Eric Minwei; Lochovsky, Lucas; Lou, Shaoke; Madsen, Tobias; Marchal, Kathleen; Martincorena, Inigo; Martinez-Fundichely, Alexander; Maruvka, Yosef E.; McGillivray, Patrick D.; Meyerson, William; Muinos, Ferran; Mularoni, Loris; Nakagawa, Hidewaki; Nielsen, Morten Muhlig; Paczkowska, Marta; Park, Keunchil; Park, Kiejung; Pedersen, Jakob Skou; Pich, Oriol; Pons, Tirso; Pulido-Tamayo, Sergio; Raphael, Benjamin J.; Reimand, Juri; Reyes-Salazar, Iker; Reyna, Matthew A.; Rheinbay, Esther; Rubin, Mark A.; Rubio-Perez, Carlota; Sabarinathan, Radhakrishnan; Sahinalp, S. Cenk; Saksena, Gordon; Salichos, Leonidas; Sander, Chris; Schumacher, Steven E.; Shackleton, Mark; Shapira, Ofer; Shen, Ciyue; Shrestha, Raunak; Shuai, Shimin; Sidiropoulos, Nikos; Sieverling, Lina; Sinnott-Armstrong, Nasa; Stein, Lincoln D.; Stuart, Joshua M.; Tamborero, David; Tiao, Grace; Tsunoda, Tatsuhiko; Umer, Husen M.; Uuskula-Reimand, Liis; Valencia, Alfonso; Vazquez, Miguel; Verbeke, Lieven P. C.; Wadelius, Claes; Wadi, Lina; Wang, Jiayin; Warrell, Jonathan; Waszak, Sebastian M.; Weischenfeldt, Joachim; Wheeler, David A.; Wu, Guanming; Yu, Jun; Zhang, Jing; Zhang, Xuanping; Zhang, Yan; Zhao, Zhongming; Zou, Lihua; von Mering, Christian Share Save
Identification of Cancer Drivers at CTCF Insulators in 1,962 Whole Genomes Liu, Eric Minwei; Martinez-Fundichely, Alexander; Diaz, Bianca Jay; Aronson, Boaz; Cuykendall, Tawny; MacKay, Matthew; Dhingra, Priyanka; Wong, Elissa W. P.; Chi, Ping; Apostolou, Effie; Sanjana, Neville E.; Khurana, Ekta Share Save
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Identification of novel prostate cancer drivers using RegNetDriver: a framework for integration of genetic and epigenetic alterations with tissue-specific regulatory network Dhingra, Priyanka; Martinez-Fundichely, Alexander; Berger, Adeline; Huang, Franklin W.; Forbes, Andre Neil; Liu, Eric Minwei; Liu, Deli; Sboner, Andrea; Tamayo, Pablo; Rickman, David S.; Rubin, Mark A.; Khurana, Ekta Share Save
Inherited determinants of early recurrent somatic mutations in prostate cancer Romanel, Alessandro; Garritano, Sonia Iolanda; Stringa, Blerta; Blattner, Mirj Am; Dalfovo, Davide; Chakravarty, Dimple; Cotter, Kellie; Dhingra, Priyanka; Gasperini, Paola; Elemento, Olivier; Sboner, Andrea; Inga, Alberto; Khurana, Ekta; Rubin, MarK; Demichelis, Francesca Share Save
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Inherited determinants of early recurrent somatic mutations in prostate cancer Romanel, Alessandro; Garritano, Sonia; Stringa, Blerta; Blattner, Mirjam; Dalfovo, Davide; Chakravarty, Dimple; Soong, David; Cotter, Kellie A.; Petris, Gianluca; Dhingra, Priyanka; Gasperini, Paola; Cereseto, Anna; Elemento, Olivier; Sboner, Andrea; Khurana, Ekta; Inga, Alberto; Rubin, Mark A.; Demichelis, Francesca Share Save
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